RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W LAT1P12695 482 aaKnown RBP2.77□□□□□ -1.97
TRM2YKR056W VMA2P16140 517 aaKnown RBP2.77□□□□□ -1.97
TRM2YKR056W CDC20P26309 610 aa2.77□□□□□ -1.97
TRM2YKR056W LST4P34239 828 aa2.77□□□□□ -1.97
TRM2YKR056W UBP11P36026 717 aa2.77□□□□□ -1.97
TRM2YKR056W HEL1P36113 551 aa2.77□□□□□ -1.97
TRM2YKR056W KTR3P38130 404 aaPredicted RBP2.77□□□□□ -1.97
TRM2YKR056W FET5P43561 622 aa2.77□□□□□ -1.97
TRM2YKR056W BUD27P43573 796 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
TRM2YKR056W MPS3P47069 682 aa2.77□□□□□ -1.97
TRM2YKR056W RPS15Q01855 142 aaKnown RBP2.77□□□□□ -1.97
TRM2YKR056W SOV1Q04748 898 aa2.77□□□□□ -1.97
TRM2YKR056W RSF1Q05043 376 aa2.77□□□□□ -1.97
TRM2YKR056W SPE3Q12074 293 aaKnown RBP2.77□□□□□ -1.97
TRM2YKR056W MLH3Q12083 715 aa2.77□□□□□ -1.97
TRM2YKR056W TRM13Q12383 476 aa2.77□□□□□ -1.97
TRM2YKR056W ERG27Q12452 347 aaKnown RBP2.77□□□□□ -1.97
TRM2YKR056W Q0010Q9ZZX9 128 aa2.77□□□□□ -1.97
TRM2YKR056W YRF1-4O13559 1382 aa2.76□□□□□ -1.97
TRM2YKR056W ARD1P07347 238 aaPredicted RBP2.76□□□□□ -1.97
TRM2YKR056W DFR1P07807 211 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
TRM2YKR056W SRP54P20424 541 aaKnown RBP2.76□□□□□ -1.97
TRM2YKR056W KGD1P20967 1014 aaKnown RBP2.76□□□□□ -1.97
TRM2YKR056W TRX1P22217 103 aaKnown RBP2.76□□□□□ -1.97
TRM2YKR056W SEC15P22224 910 aa2.76□□□□□ -1.97
TRM2YKR056W CPR2P23285 205 aa2.76□□□□□ -1.97
TRM2YKR056W PRE8P23639 250 aa2.76□□□□□ -1.97
TRM2YKR056W WBP1P33767 430 aaKnown RBP2.76□□□□□ -1.97
TRM2YKR056W PMT1P33775 817 aa2.76□□□□□ -1.97
TRM2YKR056W THI2P38141 450 aa2.76□□□□□ -1.97
TRM2YKR056W REG2P38232 338 aa2.76□□□□□ -1.97
TRM2YKR056W SIF2P38262 535 aa2.76□□□□□ -1.97
TRM2YKR056W SDH8P38345 138 aa2.76□□□□□ -1.97
TRM2YKR056W YHR097CP38809 366 aaKnown RBP2.76□□□□□ -1.97
TRM2YKR056W YJL206CP39529 758 aa2.76□□□□□ -1.97
TRM2YKR056W CTK2P46962 323 aa2.76□□□□□ -1.97
TRM2YKR056W YJL055WP47044 245 aa2.76□□□□□ -1.97
TRM2YKR056W BUL1P48524 976 aa2.76□□□□□ -1.97
TRM2YKR056W TOF1P53840 1238 aa2.76□□□□□ -1.97
TRM2YKR056W YNL092WP53934 400 aa2.76□□□□□ -1.97
TRM2YKR056W YNL058CP53947 316 aa2.76□□□□□ -1.97
TRM2YKR056W INA17Q02888 182 aa2.76□□□□□ -1.97
TRM2YKR056W FRE5Q08908 694 aa2.76□□□□□ -1.97
TRM2YKR056W YBR255C-AQ3E776 120 aa2.76□□□□□ -1.97
TRM2YKR056W GAL80P04387 435 aa2.76□□□□□ -1.97
TRM2YKR056W DAP2P18962 818 aa2.76□□□□□ -1.97
TRM2YKR056W PRP28P23394 588 aa2.76□□□□□ -1.97
TRM2YKR056W SYN8P31377 255 aa2.76□□□□□ -1.97
TRM2YKR056W GCD7P32502 381 aaPredicted RBP2.76□□□□□ -1.97
TRM2YKR056W CDC5P32562 705 aa2.76□□□□□ -1.97
TRM2YKR056W TIF3P34167 436 aaKnown RBP2.76□□□□□ -1.97
TRM2YKR056W SSU1P41930 458 aa2.76□□□□□ -1.97
TRM2YKR056W SKP2P42843 763 aa2.76□□□□□ -1.97
TRM2YKR056W UBC11P52492 156 aa2.76□□□□□ -1.97
TRM2YKR056W PAN2P53010 1115 aaPredicted RBP2.76□□□□□ -1.97
TRM2YKR056W SPC98P53540 846 aa2.76□□□□□ -1.97
TRM2YKR056W SNF12P53628 566 aa2.76□□□□□ -1.97
TRM2YKR056W PRO2P54885 456 aaKnown RBP2.76□□□□□ -1.97
TRM2YKR056W YML037CQ03703 340 aa2.76□□□□□ -1.97
TRM2YKR056W RQC1Q05468 723 aaKnown RBP2.76□□□□□ -1.97
TRM2YKR056W VPS38Q05919 439 aa2.76□□□□□ -1.97
TRM2YKR056W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
TRM2YKR056W RPN5Q12250 445 aaKnown RBP2.76□□□□□ -1.97
TRM2YKR056W PSY3Q12318 242 aa2.76□□□□□ -1.97
TRM2YKR056W RRP36Q12481 300 aaPredicted RBP2.76□□□□□ -1.97
TRM2YKR056W AFI1Q99222 893 aa2.76□□□□□ -1.97
TRM2YKR056W PCT1P13259 424 aa2.75□□□□□ -1.97
TRM2YKR056W MDH1P17505 334 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
TRM2YKR056W REC107P21651 314 aa2.75□□□□□ -1.97
TRM2YKR056W AMD2P22580 549 aa2.75□□□□□ -1.97
TRM2YKR056W CLB3P24870 427 aa2.75□□□□□ -1.97
TRM2YKR056W BUD14P27637 709 aa2.75□□□□□ -1.97
TRM2YKR056W MRE11P32829 692 aa2.75□□□□□ -1.97
TRM2YKR056W SEC66P33754 206 aa2.75□□□□□ -1.97
TRM2YKR056W KES1P35844 434 aaKnown RBP2.75□□□□□ -1.97
TRM2YKR056W ELF1P36053 145 aa2.75□□□□□ -1.97
TRM2YKR056W UIP5P36137 443 aa2.75□□□□□ -1.97
TRM2YKR056W APE3P37302 537 aaKnown RBP2.75□□□□□ -1.97
TRM2YKR056W ADH5P38113 351 aaKnown RBP2.75□□□□□ -1.97
TRM2YKR056W CTP1P38152 299 aa2.75□□□□□ -1.97
TRM2YKR056W YIL161WP40449 235 aaKnown RBP2.75□□□□□ -1.97
TRM2YKR056W SNM1P40993 198 aa2.75□□□□□ -1.97
TRM2YKR056W MAF1P41910 395 aa2.75□□□□□ -1.97
TRM2YKR056W MUP1P50276 574 aa2.75□□□□□ -1.97
TRM2YKR056W SPT20P50875 604 aa2.75□□□□□ -1.97
TRM2YKR056W NCS2P53923 493 aaPredicted RBP2.75□□□□□ -1.97
TRM2YKR056W DAK1P54838 584 aaKnown RBP2.75□□□□□ -1.97
TRM2YKR056W SEC5P89102 971 aa2.75□□□□□ -1.97
TRM2YKR056W YDR341CQ05506 607 aaKnown RBP2.75□□□□□ -1.97
TRM2YKR056W YLR224WQ05947 369 aa2.75□□□□□ -1.97
TRM2YKR056W MRI1Q06489 411 aaKnown RBP2.75□□□□□ -1.97
TRM2YKR056W ATG23Q06671 453 aa2.75□□□□□ -1.97
TRM2YKR056W ACK1Q07622 623 aaPredicted RBP2.75□□□□□ -1.97
TRM2YKR056W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
TRM2YKR056W TCO89Q08921 799 aa2.75□□□□□ -1.97
TRM2YKR056W INO80P53115 1489 aa2.74□□□□□ -1.97
TRM2YKR056W YBR085C-AO43137 85 aa2.74□□□□□ -1.97
TRM2YKR056W SIR3P06701 978 aa2.74□□□□□ -1.97
TRM2YKR056W RPL1AP0CX43 217 aaKnown RBP2.74□□□□□ -1.97
TRM2YKR056W RPL1BP0CX44 217 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms