RNA–Protein interactions for RNA: YKL160W

ELF1, Transcript of Transcription elongation factor with a conserved zinc finger domain, yeast

Gene ELF1, Length 438 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ELF1	YKL160W	ILS1	P09436	1072 aa	Known RBP	4.84	□□□□□ -1.63
ELF1	YKL160W	LAC1	P28496	418 aa		4.84	□□□□□ -1.63
ELF1	YKL160W	HES1	P35843	434 aa		4.84	□□□□□ -1.63
ELF1	YKL160W	NPR3	P38742	1146 aa		4.84	□□□□□ -1.63
ELF1	YKL160W	IRC7	P43623	340 aa		4.84	□□□□□ -1.63
ELF1	YKL160W	ZAP1	P47043	880 aa		4.84	□□□□□ -1.63
ELF1	YKL160W	RSC9	Q03124	581 aa		4.84	□□□□□ -1.63
ELF1	YKL160W	SNU56	Q03782	492 aa	Known RBP	4.84	□□□□□ -1.63
ELF1	YKL160W	BLS1	Q06071	122 aa		4.84	□□□□□ -1.63
ELF1	YKL160W	ATG23	Q06671	453 aa		4.84	□□□□□ -1.63
ELF1	YKL160W	AFT2	Q08957	416 aa		4.84	□□□□□ -1.63
ELF1	YKL160W	PRS5	Q12265	496 aa	Known RBP	4.84	□□□□□ -1.63
ELF1	YKL160W	RPO41	P13433	1351 aa	Known RBP	4.83	□□□□□ -1.64
ELF1	YKL160W	AUS1	Q08409	1394 aa		4.83	□□□□□ -1.64
ELF1	YKL160W	COX1	P00401	534 aa		4.83	□□□□□ -1.64
ELF1	YKL160W	APA1	P16550	321 aa	Known RBP	4.83	□□□□□ -1.64
ELF1	YKL160W	YCL049C	P25577	312 aa		4.83	□□□□□ -1.64
ELF1	YKL160W	PTC6	P25646	442 aa		4.83	□□□□□ -1.64
ELF1	YKL160W	BUD16	P39988	312 aa		4.83	□□□□□ -1.64
ELF1	YKL160W	RSF2	P46974	1380 aa		4.82	□□□□□ -1.64
ELF1	YKL160W	NCP1	P16603	691 aa	Known RBP	4.82	□□□□□ -1.64
ELF1	YKL160W	GSH1	P32477	678 aa		4.82	□□□□□ -1.64
ELF1	YKL160W	NUP120	P35729	1037 aa		4.82	□□□□□ -1.64
ELF1	YKL160W	IMD2	P38697	523 aa	Known RBP	4.82	□□□□□ -1.64
ELF1	YKL160W	RTR1	P40084	226 aa	Predicted RBP	4.82	□□□□□ -1.64
ELF1	YKL160W	PSF2	P40359	213 aa		4.82	□□□□□ -1.64
ELF1	YKL160W	CIN1	P40987	1014 aa		4.82	□□□□□ -1.64
ELF1	YKL160W	IMD3	P50095	523 aa	Known RBP	4.82	□□□□□ -1.64
ELF1	YKL160W	RTS3	P53289	263 aa		4.82	□□□□□ -1.64
ELF1	YKL160W	STP1	Q00947	519 aa		4.82	□□□□□ -1.64
ELF1	YKL160W	MRPL13	Q02204	264 aa		4.82	□□□□□ -1.64
ELF1	YKL160W	VMS1	Q04311	632 aa	Known RBP	4.82	□□□□□ -1.64
ELF1	YKL160W	CIA1	Q05583	330 aa		4.82	□□□□□ -1.64
ELF1	YKL160W	LEA1	Q08963	238 aa	Predicted RBP	4.82	□□□□□ -1.64
ELF1	YKL160W	PLP2	Q12017	286 aa		4.82	□□□□□ -1.64
ELF1	YKL160W	BAG7	Q12128	409 aa		4.82	□□□□□ -1.64
ELF1	YKL160W	DJP1	P40564	432 aa		4.81	□□□□□ -1.64
ELF1	YKL160W	ERR3	P42222	437 aa		4.81	□□□□□ -1.64
ELF1	YKL160W	VAM6	Q07468	1049 aa		4.81	□□□□□ -1.64
ELF1	YKL160W	HSP82	P02829	709 aa	Known RBP	4.8	□□□□□ -1.64
ELF1	YKL160W	RPP0	P05317	312 aa	Known RBP	4.8	□□□□□ -1.64
ELF1	YKL160W	NUC1	P08466	329 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	YMR085W	P0CF18	432 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	MTF2	P10849	440 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	SPO16	P17122	198 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	LRE1	P25579	583 aa	Known RBP	4.8	□□□□□ -1.64
ELF1	YKL160W	COQ3	P27680	312 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	DBF20	P32328	564 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	PHM8	P40025	321 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	SAP185	P40856	1058 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	DSD1	P53095	428 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	ARC35	P53731	342 aa	Known RBP	4.8	□□□□□ -1.64
ELF1	YKL160W	YDR109C	Q04585	715 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	THI3	Q07471	609 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	YDL144C	Q07589	356 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	CRC1	Q12289	327 aa		4.8	□□□□□ -1.64
ELF1	YKL160W	HSP104	P31539	908 aa	Known RBP	4.79	□□□□□ -1.64
ELF1	YKL160W	MRS6	P32864	603 aa	Known RBP	4.79	□□□□□ -1.64
ELF1	YKL160W	XRS2	P33301	854 aa		4.79	□□□□□ -1.64
ELF1	YKL160W	ERV46	P39727	415 aa		4.79	□□□□□ -1.64
ELF1	YKL160W	YIL161W	P40449	235 aa	Known RBP	4.79	□□□□□ -1.64
ELF1	YKL160W	ORC5	P50874	479 aa		4.79	□□□□□ -1.64
ELF1	YKL160W	ATG16	Q03818	150 aa		4.79	□□□□□ -1.64
ELF1	YKL160W	SWT1	Q12104	458 aa		4.79	□□□□□ -1.64
ELF1	YKL160W	GET3	Q12154	354 aa	Known RBP	4.79	□□□□□ -1.64
ELF1	YKL160W	HIF1	Q12373	385 aa		4.79	□□□□□ -1.64
ELF1	YKL160W	ROM2	P51862	1356 aa	Known RBP	4.78	□□□□□ -1.64
ELF1	YKL160W	YAP1	P19880	650 aa	Known RBP	4.78	□□□□□ -1.64
ELF1	YKL160W	UBC1	P21734	215 aa	Known RBP	4.78	□□□□□ -1.64
ELF1	YKL160W	PRD1	P25375	712 aa		4.78	□□□□□ -1.64
ELF1	YKL160W	MSS51	P32335	436 aa		4.78	□□□□□ -1.64
ELF1	YKL160W	RPS0A	P32905	252 aa	Known RBP	4.78	□□□□□ -1.64
ELF1	YKL160W	UBP7	P40453	1071 aa		4.78	□□□□□ -1.64
ELF1	YKL160W	MNT3	P40549	630 aa		4.78	□□□□□ -1.64
ELF1	YKL160W	CFD1	P40558	293 aa		4.78	□□□□□ -1.64
ELF1	YKL160W	SMK1	P41808	388 aa		4.78	□□□□□ -1.64
ELF1	YKL160W	MPP10	P47083	593 aa	Known RBP	4.78	□□□□□ -1.64
ELF1	YKL160W	MSY1	P48527	492 aa		4.78	□□□□□ -1.64
ELF1	YKL160W	GLO1	P50107	326 aa		4.78	□□□□□ -1.64
ELF1	YKL160W	RRP46	P53256	223 aa	Predicted RBP	4.78	□□□□□ -1.64
ELF1	YKL160W	PSR2	Q07949	397 aa		4.78	□□□□□ -1.64
ELF1	YKL160W	CDC45	Q08032	650 aa		4.78	□□□□□ -1.64
ELF1	YKL160W	SIR4	P11978	1358 aa		4.78	□□□□□ -1.64
ELF1	YKL160W	ATP2	P00830	511 aa	Known RBP	4.77	□□□□□ -1.65
ELF1	YKL160W	YML003W	P0CF16	290 aa		4.77	□□□□□ -1.65
ELF1	YKL160W	PWP2	P25635	923 aa	Known RBP	4.77	□□□□□ -1.65
ELF1	YKL160W	RAD16	P31244	790 aa		4.77	□□□□□ -1.65
ELF1	YKL160W	ECM32	P32644	1121 aa	Known RBP	4.77	□□□□□ -1.65
ELF1	YKL160W	VPS24	P36095	224 aa	Known RBP	4.77	□□□□□ -1.65
ELF1	YKL160W	JHD1	P40034	492 aa		4.77	□□□□□ -1.65
ELF1	YKL160W	IES5	P40060	125 aa		4.77	□□□□□ -1.65
ELF1	YKL160W	CWC22	P53333	577 aa	Known RBP	4.77	□□□□□ -1.65
ELF1	YKL160W	COP1	P53622	1201 aa	Known RBP	4.77	□□□□□ -1.65
ELF1	YKL160W	STP3	Q05937	343 aa		4.77	□□□□□ -1.65
ELF1	YKL160W	CSR1	Q06705	408 aa	Known RBP	4.77	□□□□□ -1.65
ELF1	YKL160W	YRF1-4	O13559	1382 aa		4.77	□□□□□ -1.65
ELF1	YKL160W	TPK1	P06244	397 aa		4.76	□□□□□ -1.65
ELF1	YKL160W	RFA2	P26754	273 aa	Known RBP	4.76	□□□□□ -1.65
ELF1	YKL160W	TOA1	P32773	286 aa		4.76	□□□□□ -1.65
ELF1	YKL160W	EXO84	P38261	753 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms