RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C MRP20P32387 263 aa2.32□□□□□ -2.04
VPS35YJL154C HOT13P36078 116 aa2.32□□□□□ -2.04
VPS35YJL154C FTH1P38310 465 aa2.32□□□□□ -2.04
VPS35YJL154C RTS1P38903 757 aa2.32□□□□□ -2.04
VPS35YJL154C VPS8P39702 1274 aa2.32□□□□□ -2.04
VPS35YJL154C HRD3Q05787 833 aa2.32□□□□□ -2.04
VPS35YJL154C TSR2Q06672 205 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C RDL1Q12305 139 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C YBR126W-AQ8TGU7 68 aa2.32□□□□□ -2.04
VPS35YJL154C YOL087CQ99247 1116 aa2.32□□□□□ -2.04
VPS35YJL154C PAN1P32521 1480 aa2.32□□□□□ -2.04
VPS35YJL154C SEC53P07283 254 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C CDC16P09798 840 aa2.32□□□□□ -2.04
VPS35YJL154C PAH1P32567 862 aa2.32□□□□□ -2.04
VPS35YJL154C KES1P35844 434 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C AGP2P38090 596 aa2.32□□□□□ -2.04
VPS35YJL154C ARC1P46672 376 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C NNF2P53253 936 aa2.32□□□□□ -2.04
VPS35YJL154C SVL3Q03088 825 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C BSP1Q06604 576 aa2.32□□□□□ -2.04
VPS35YJL154C PSR1Q07800 427 aa2.32□□□□□ -2.04
VPS35YJL154C PRS5Q12265 496 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C SPE2P21182 396 aa2.31□□□□□ -2.04
VPS35YJL154C SAN1P22470 610 aa2.31□□□□□ -2.04
VPS35YJL154C VMA16P23968 213 aa2.31□□□□□ -2.04
VPS35YJL154C BUD16P39988 312 aa2.31□□□□□ -2.04
VPS35YJL154C IME4P41833 600 aa2.31□□□□□ -2.04
VPS35YJL154C RAD30Q04049 632 aa2.31□□□□□ -2.04
VPS35YJL154C SKG3Q06315 1026 aa2.31□□□□□ -2.04
VPS35YJL154C ENT4Q07872 247 aa2.31□□□□□ -2.04
VPS35YJL154C VCX1Q99385 411 aa2.31□□□□□ -2.04
VPS35YJL154C BNR1P40450 1375 aa2.31□□□□□ -2.04
VPS35YJL154C PEP3P27801 918 aa2.31□□□□□ -2.04
VPS35YJL154C YJU2P28320 278 aaPredicted RBP2.31□□□□□ -2.04
VPS35YJL154C CBF2P32504 956 aa2.31□□□□□ -2.04
VPS35YJL154C MSY1P48527 492 aa2.31□□□□□ -2.04
VPS35YJL154C ORC5P50874 479 aa2.31□□□□□ -2.04
VPS35YJL154C IST1P53843 298 aaPredicted RBP2.31□□□□□ -2.04
VPS35YJL154C MUB1Q03162 620 aa2.31□□□□□ -2.04
VPS35YJL154C SNU56Q03782 492 aaKnown RBP2.31□□□□□ -2.04
VPS35YJL154C ARP9Q05123 467 aa2.31□□□□□ -2.04
VPS35YJL154C TFC6Q06339 672 aa2.31□□□□□ -2.04
VPS35YJL154C VPS15P22219 1454 aa2.31□□□□□ -2.04
VPS35YJL154C DOP1Q03921 1698 aa2.31□□□□□ -2.04
VPS35YJL154C RPB2P08518 1224 aaKnown RBP2.3□□□□□ -2.04
VPS35YJL154C AAC3P18238 307 aa2.3□□□□□ -2.04
VPS35YJL154C GSY2P27472 705 aa2.3□□□□□ -2.04
VPS35YJL154C NTR2P36118 322 aaPredicted RBP2.3□□□□□ -2.04
VPS35YJL154C MAL33P38157 468 aa2.3□□□□□ -2.04
VPS35YJL154C NOP16P40007 231 aaKnown RBP2.3□□□□□ -2.04
VPS35YJL154C BUR6P40096 142 aa2.3□□□□□ -2.04
VPS35YJL154C SLZ1P40167 298 aa2.3□□□□□ -2.04
VPS35YJL154C ZDS2P54786 942 aa2.3□□□□□ -2.04
VPS35YJL154C RPT6Q01939 405 aaKnown RBP2.3□□□□□ -2.04
VPS35YJL154C PFA5Q03289 374 aa2.3□□□□□ -2.04
VPS35YJL154C PSK2Q08217 1101 aa2.3□□□□□ -2.04
VPS35YJL154C CUE2P36075 443 aaKnown RBP2.3□□□□□ -2.04
VPS35YJL154C NOP4P37838 685 aaKnown RBP2.3□□□□□ -2.04
VPS35YJL154C ADE17P38009 592 aaKnown RBP2.3□□□□□ -2.04
VPS35YJL154C SEC31P38968 1273 aaKnown RBP2.3□□□□□ -2.04
VPS35YJL154C PSD1P39006 500 aa2.3□□□□□ -2.04
VPS35YJL154C SNO3P43544 222 aa2.3□□□□□ -2.04
VPS35YJL154C SAE2P46946 345 aa2.3□□□□□ -2.04
VPS35YJL154C AAD10P47182 288 aa2.3□□□□□ -2.04
VPS35YJL154C BPL1P48445 690 aaPredicted RBP2.3□□□□□ -2.04
VPS35YJL154C ERG13P54839 491 aaKnown RBP2.3□□□□□ -2.04
VPS35YJL154C BUD22Q04347 519 aaKnown RBP2.3□□□□□ -2.04
VPS35YJL154C SPN1Q06505 410 aaPredicted RBP2.3□□□□□ -2.04
VPS35YJL154C RRI2Q12348 645 aa2.3□□□□□ -2.04
VPS35YJL154C TY1B-BRQ12193 1756 aa2.3□□□□□ -2.04
VPS35YJL154C TY1B-GR3Q12316 1755 aa2.3□□□□□ -2.04
VPS35YJL154C TY1B-ORQ92393 1755 aa2.3□□□□□ -2.04
VPS35YJL154C SEM1O94742 89 aa2.29□□□□□ -2.04
VPS35YJL154C ESL2P36168 1195 aa2.29□□□□□ -2.04
VPS35YJL154C AAP1P37898 856 aaKnown RBP2.29□□□□□ -2.04
VPS35YJL154C NOC2P39744 710 aaKnown RBP2.29□□□□□ -2.04
VPS35YJL154C SEC24P40482 926 aaKnown RBP2.29□□□□□ -2.04
VPS35YJL154C LGE1Q02796 332 aaKnown RBP2.29□□□□□ -2.04
VPS35YJL154C RSM28Q03430 361 aa2.29□□□□□ -2.04
VPS35YJL154C APL4Q12028 832 aa2.29□□□□□ -2.04
VPS35YJL154C MRP7P12687 371 aa2.29□□□□□ -2.04
VPS35YJL154C SAC6P32599 642 aaKnown RBP2.29□□□□□ -2.04
VPS35YJL154C SCO2P38072 301 aa2.29□□□□□ -2.04
VPS35YJL154C PHM8P40025 321 aa2.29□□□□□ -2.04
VPS35YJL154C JHD1P40034 492 aa2.29□□□□□ -2.04
VPS35YJL154C YFR016CP43597 1233 aaKnown RBP2.29□□□□□ -2.04
VPS35YJL154C RMD8P43620 662 aa2.29□□□□□ -2.04
VPS35YJL154C IRC7P43623 340 aa2.29□□□□□ -2.04
VPS35YJL154C DIA3P52290 468 aa2.29□□□□□ -2.04
VPS35YJL154C DUO1P53168 247 aaKnown RBP2.29□□□□□ -2.04
VPS35YJL154C YNL144CP53907 740 aa2.29□□□□□ -2.04
VPS35YJL154C MDM1Q01846 1127 aa2.29□□□□□ -2.04
VPS35YJL154C YSA1Q01976 231 aa2.29□□□□□ -2.04
VPS35YJL154C PDR8Q06149 701 aa2.29□□□□□ -2.04
VPS35YJL154C RAD34Q06665 692 aa2.29□□□□□ -2.04
VPS35YJL154C VIP1Q06685 1146 aaKnown RBP2.29□□□□□ -2.04
VPS35YJL154C RIX7Q07844 837 aaKnown RBP2.29□□□□□ -2.04
VPS35YJL154C OSW1Q08692 278 aa2.29□□□□□ -2.04
VPS35YJL154C NOP58Q12499 511 aaKnown RBP2.29□□□□□ -2.04
VPS35YJL154C RAP1P11938 827 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms