RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C YSH1Q06224 779 aaPredicted RBP2.09□□□□□ -2.07
RTT101YJL047C PCL8Q08966 492 aa2.09□□□□□ -2.07
RTT101YJL047C PLP2Q12017 286 aa2.09□□□□□ -2.07
RTT101YJL047C LYS21Q12122 440 aaKnown RBP2.09□□□□□ -2.07
RTT101YJL047C SVS1Q12254 260 aa2.09□□□□□ -2.07
RTT101YJL047C SEC39Q12745 709 aa2.09□□□□□ -2.07
RTT101YJL047C GPM1P00950 247 aaKnown RBP2.09□□□□□ -2.08
RTT101YJL047C GAL80P04387 435 aa2.09□□□□□ -2.08
RTT101YJL047C RPL3P14126 387 aaKnown RBP2.09□□□□□ -2.08
RTT101YJL047C SAM35P14693 329 aa2.09□□□□□ -2.08
RTT101YJL047C PRP4P20053 465 aaKnown RBP2.09□□□□□ -2.08
RTT101YJL047C FPS1P23900 669 aa2.09□□□□□ -2.08
RTT101YJL047C PRP45P28004 379 aaPredicted RBP2.09□□□□□ -2.08
RTT101YJL047C HXT3P32466 567 aaKnown RBP2.09□□□□□ -2.08
RTT101YJL047C SFB3P38810 929 aa2.09□□□□□ -2.08
RTT101YJL047C REV7P38927 245 aa2.09□□□□□ -2.08
RTT101YJL047C ACO2P39533 789 aa2.09□□□□□ -2.08
RTT101YJL047C SEC24P40482 926 aaKnown RBP2.09□□□□□ -2.08
RTT101YJL047C PXA1P41909 870 aa2.09□□□□□ -2.08
RTT101YJL047C DLD2P46681 530 aaKnown RBP2.09□□□□□ -2.08
RTT101YJL047C CTK2P46962 323 aa2.09□□□□□ -2.08
RTT101YJL047C YGL242CP53066 181 aa2.09□□□□□ -2.08
RTT101YJL047C YNL143CP53908 130 aa2.09□□□□□ -2.08
RTT101YJL047C ARP5P53946 755 aa2.09□□□□□ -2.08
RTT101YJL047C KAP120Q02932 1032 aa2.09□□□□□ -2.08
RTT101YJL047C YDR239CQ03780 787 aa2.09□□□□□ -2.08
RTT101YJL047C YDR444WQ04093 687 aa2.09□□□□□ -2.08
RTT101YJL047C MUS81Q04149 632 aaPredicted RBP2.09□□□□□ -2.08
RTT101YJL047C UFO1Q04511 668 aa2.09□□□□□ -2.08
RTT101YJL047C RQC1Q05468 723 aaKnown RBP2.09□□□□□ -2.08
RTT101YJL047C VPS54Q12071 889 aa2.09□□□□□ -2.08
RTT101YJL047C SWT1Q12104 458 aa2.09□□□□□ -2.08
RTT101YJL047C TDH1P00360 332 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C RNA1P11745 407 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C UNG1P12887 359 aa2.08□□□□□ -2.08
RTT101YJL047C SAC7P17121 654 aa2.08□□□□□ -2.08
RTT101YJL047C CAD1P24813 409 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C NTG1P31378 399 aa2.08□□□□□ -2.08
RTT101YJL047C AFG1P32317 509 aa2.08□□□□□ -2.08
RTT101YJL047C MRP4P32902 394 aa2.08□□□□□ -2.08
RTT101YJL047C ARC19P33204 171 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C PGM1P33401 570 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C MAE1P36013 669 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C YKT6P36015 200 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C SLM4P38247 162 aa2.08□□□□□ -2.08
RTT101YJL047C MMS4P38257 691 aa2.08□□□□□ -2.08
RTT101YJL047C NTC20P38302 140 aaPredicted RBP2.08□□□□□ -2.08
RTT101YJL047C OSH7P38755 437 aa2.08□□□□□ -2.08
RTT101YJL047C CTF8P38877 133 aa2.08□□□□□ -2.08
RTT101YJL047C AKR1P39010 764 aa2.08□□□□□ -2.08
RTT101YJL047C ELO3P40319 345 aa2.08□□□□□ -2.08
RTT101YJL047C YIL089WP40500 205 aa2.08□□□□□ -2.08
RTT101YJL047C GTS1P40956 396 aa2.08□□□□□ -2.08
RTT101YJL047C IME4P41833 600 aa2.08□□□□□ -2.08
RTT101YJL047C ASE1P50275 885 aa2.08□□□□□ -2.08
RTT101YJL047C MLC1P53141 149 aa2.08□□□□□ -2.08
RTT101YJL047C YGR066CP53242 292 aa2.08□□□□□ -2.08
RTT101YJL047C AQR1P53943 586 aa2.08□□□□□ -2.08
RTT101YJL047C YMR265CQ03508 461 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C HMO1Q03973 246 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C VPS38Q05919 439 aa2.08□□□□□ -2.08
RTT101YJL047C DCI1Q08558 271 aa2.08□□□□□ -2.08
RTT101YJL047C MRPL23Q12487 163 aaPredicted RBP2.08□□□□□ -2.08
RTT101YJL047C ADF1Q2V2Q1 113 aa2.08□□□□□ -2.08
RTT101YJL047C ECM3Q99252 613 aa2.08□□□□□ -2.08
RTT101YJL047C ARG80P07249 177 aa2.08□□□□□ -2.08
RTT101YJL047C PRB1P09232 635 aa2.08□□□□□ -2.08
RTT101YJL047C URK1P27515 501 aa2.08□□□□□ -2.08
RTT101YJL047C YJU2P28320 278 aaPredicted RBP2.08□□□□□ -2.08
RTT101YJL047C YBL055CP34220 418 aaPredicted RBP2.08□□□□□ -2.08
RTT101YJL047C MNN2P38069 597 aa2.08□□□□□ -2.08
RTT101YJL047C YBL028CP38202 106 aa2.08□□□□□ -2.08
RTT101YJL047C COS111P38308 924 aa2.08□□□□□ -2.08
RTT101YJL047C YHR112CP38716 378 aa2.08□□□□□ -2.08
RTT101YJL047C YHL017WP38745 532 aa2.08□□□□□ -2.08
RTT101YJL047C ERC1P38767 581 aa2.08□□□□□ -2.08
RTT101YJL047C YHR078WP38799 552 aa2.08□□□□□ -2.08
RTT101YJL047C WSS1P38838 269 aa2.08□□□□□ -2.08
RTT101YJL047C MLH1P38920 769 aa2.08□□□□□ -2.08
RTT101YJL047C ZRG8P40021 1076 aa2.08□□□□□ -2.08
RTT101YJL047C ELP2P42935 788 aa2.08□□□□□ -2.08
RTT101YJL047C SMC3P47037 1230 aa2.08□□□□□ -2.08
RTT101YJL047C APT1P49435 187 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C FMS1P50264 508 aa2.08□□□□□ -2.08
RTT101YJL047C INP52P50942 1183 aa2.08□□□□□ -2.08
RTT101YJL047C COX18P53239 316 aa2.08□□□□□ -2.08
RTT101YJL047C LSC1P53598 329 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C CUZ1P53899 274 aa2.08□□□□□ -2.08
RTT101YJL047C RCM1P53972 490 aa2.08□□□□□ -2.08
RTT101YJL047C ARG5,6Q01217 863 aa2.08□□□□□ -2.08
RTT101YJL047C SMA1Q02651 245 aa2.08□□□□□ -2.08
RTT101YJL047C INP2Q03824 705 aa2.08□□□□□ -2.08
RTT101YJL047C PPM1Q04081 328 aa2.08□□□□□ -2.08
RTT101YJL047C PPN1Q04119 674 aa2.08□□□□□ -2.08
RTT101YJL047C VPS20Q04272 221 aa2.08□□□□□ -2.08
RTT101YJL047C RGC1Q06108 1083 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C WHI4Q07655 649 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C NUS1Q12063 375 aa2.08□□□□□ -2.08
RTT101YJL047C RUD3Q12234 484 aaKnown RBP2.08□□□□□ -2.08
RTT101YJL047C VPS63O13549 108 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms