RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	PCT1	P13259	424 aa		4.91	□□□□□ -1.62
TRP4	YDR354W	APA1	P16550	321 aa	Known RBP	4.91	□□□□□ -1.62
TRP4	YDR354W	NCP1	P16603	691 aa	Known RBP	4.91	□□□□□ -1.62
TRP4	YDR354W	PHO81	P17442	1178 aa		4.91	□□□□□ -1.62
TRP4	YDR354W	YSP3	P25036	478 aa		4.91	□□□□□ -1.62
TRP4	YDR354W	YCR006C	P25350	157 aa		4.91	□□□□□ -1.62
TRP4	YDR354W	ATO2	P32907	282 aa		4.91	□□□□□ -1.62
TRP4	YDR354W	TPA1	P40032	644 aa	Known RBP	4.91	□□□□□ -1.62
TRP4	YDR354W	DJP1	P40564	432 aa		4.91	□□□□□ -1.62
TRP4	YDR354W	YGL036W	P53185	909 aa	Predicted RBP	4.91	□□□□□ -1.62
TRP4	YDR354W	MCH4	Q08268	501 aa		4.91	□□□□□ -1.62
TRP4	YDR354W	BAG7	Q12128	409 aa		4.91	□□□□□ -1.62
TRP4	YDR354W	SMC4	Q12267	1418 aa		4.9	□□□□□ -1.62
TRP4	YDR354W	YER145C-A	A0A023PYF4	145 aa		4.9	□□□□□ -1.63
TRP4	YDR354W	VPS41	P38959	992 aa		4.9	□□□□□ -1.63
TRP4	YDR354W	ATG23	Q06671	453 aa		4.9	□□□□□ -1.63
TRP4	YDR354W	UBX3	Q12229	455 aa		4.9	□□□□□ -1.63
TRP4	YDR354W	RPL42A	P0CX27	106 aa	Known RBP	4.89	□□□□□ -1.63
TRP4	YDR354W	RPL42B	P0CX28	106 aa	Known RBP	4.89	□□□□□ -1.63
TRP4	YDR354W	LRE1	P25579	583 aa	Known RBP	4.89	□□□□□ -1.63
TRP4	YDR354W	EXO84	P38261	753 aa		4.89	□□□□□ -1.63
TRP4	YDR354W	ACA1	P39970	489 aa		4.89	□□□□□ -1.63
TRP4	YDR354W	FAF1	P40546	346 aa	Predicted RBP	4.89	□□□□□ -1.63
TRP4	YDR354W	LSC1	P53598	329 aa	Known RBP	4.89	□□□□□ -1.63
TRP4	YDR354W	EAF7	P53911	425 aa	Known RBP	4.89	□□□□□ -1.63
TRP4	YDR354W	BOP3	P53958	396 aa		4.89	□□□□□ -1.63
TRP4	YDR354W	PIG1	Q06216	648 aa		4.89	□□□□□ -1.63
TRP4	YDR354W	VAM6	Q07468	1049 aa		4.89	□□□□□ -1.63
TRP4	YDR354W	FRE3	Q08905	711 aa		4.89	□□□□□ -1.63
TRP4	YDR354W	SWT1	Q12104	458 aa		4.89	□□□□□ -1.63
TRP4	YDR354W	TOP2	P06786	1428 aa	Known RBP	4.89	□□□□□ -1.63
TRP4	YDR354W	GPA1	P08539	472 aa		4.88	□□□□□ -1.63
TRP4	YDR354W	GEX2	P36173	615 aa		4.88	□□□□□ -1.63
TRP4	YDR354W	PHM8	P40025	321 aa		4.88	□□□□□ -1.63
TRP4	YDR354W	YIL152W	P40455	235 aa		4.88	□□□□□ -1.63
TRP4	YDR354W	GSH2	Q08220	491 aa		4.88	□□□□□ -1.63
TRP4	YDR354W	SRL1	Q08673	210 aa		4.88	□□□□□ -1.63
TRP4	YDR354W	NTE1	Q04958	1679 aa		4.88	□□□□□ -1.63
TRP4	YDR354W	ATP2	P00830	511 aa	Known RBP	4.87	□□□□□ -1.63
TRP4	YDR354W	YUR1	P26725	428 aa		4.87	□□□□□ -1.63
TRP4	YDR354W	ADE17	P38009	592 aa	Known RBP	4.87	□□□□□ -1.63
TRP4	YDR354W	ASG1	P40467	964 aa		4.87	□□□□□ -1.63
TRP4	YDR354W	MEP2	P41948	499 aa		4.87	□□□□□ -1.63
TRP4	YDR354W	YMR034C	Q05131	434 aa	Predicted RBP	4.87	□□□□□ -1.63
TRP4	YDR354W	CIA1	Q05583	330 aa		4.87	□□□□□ -1.63
TRP4	YDR354W	SWA2	Q06677	668 aa		4.87	□□□□□ -1.63
TRP4	YDR354W	DSE3	Q08729	430 aa		4.87	□□□□□ -1.63
TRP4	YDR354W	BUD7	Q08754	746 aa		4.87	□□□□□ -1.63
TRP4	YDR354W	YLR112W	Q12130	139 aa		4.87	□□□□□ -1.63
TRP4	YDR354W	SPP41	P38904	1435 aa		4.87	□□□□□ -1.63
TRP4	YDR354W	RPO21	P04050	1733 aa	Known RBP	4.86	□□□□□ -1.63
TRP4	YDR354W	MRP2	P10663	115 aa	Predicted RBP	4.86	□□□□□ -1.63
TRP4	YDR354W	MSM1	P22438	575 aa		4.86	□□□□□ -1.63
TRP4	YDR354W	UBP13	P38187	747 aa		4.86	□□□□□ -1.63
TRP4	YDR354W	PSF2	P40359	213 aa		4.86	□□□□□ -1.63
TRP4	YDR354W	YIL161W	P40449	235 aa	Known RBP	4.86	□□□□□ -1.63
TRP4	YDR354W	VPS25	P47142	202 aa		4.86	□□□□□ -1.63
TRP4	YDR354W	UBP8	P50102	471 aa		4.86	□□□□□ -1.63
TRP4	YDR354W	PAP2	P53632	584 aa	Known RBP	4.86	□□□□□ -1.63
TRP4	YDR354W	ARC35	P53731	342 aa	Known RBP	4.86	□□□□□ -1.63
TRP4	YDR354W	UBX4	P54730	416 aa		4.86	□□□□□ -1.63
TRP4	YDR354W	NUP53	Q03790	475 aa		4.86	□□□□□ -1.63
TRP4	YDR354W	MLH2	Q07980	695 aa		4.86	□□□□□ -1.63
TRP4	YDR354W	COX17	Q12287	69 aa		4.86	□□□□□ -1.63
TRP4	YDR354W	PCD1	Q12524	340 aa		4.86	□□□□□ -1.63
TRP4	YDR354W	PDR10	P51533	1564 aa		4.86	□□□□□ -1.63
TRP4	YDR354W	YCR043C	P25361	127 aa		4.85	□□□□□ -1.63
TRP4	YDR354W	YLR455W	Q06188	304 aa		4.85	□□□□□ -1.63
TRP4	YDR354W	NUC1	P08466	329 aa		4.84	□□□□□ -1.63
TRP4	YDR354W	YCL049C	P25577	312 aa		4.84	□□□□□ -1.63
TRP4	YDR354W	NUP120	P35729	1037 aa		4.84	□□□□□ -1.63
TRP4	YDR354W	ARC40	P38328	384 aa	Known RBP	4.84	□□□□□ -1.63
TRP4	YDR354W	STB2	P46679	850 aa		4.84	□□□□□ -1.63
TRP4	YDR354W	DCP2	P53550	970 aa	Known RBP	4.84	□□□□□ -1.63
TRP4	YDR354W	IZH1	Q03419	316 aa		4.84	□□□□□ -1.63
TRP4	YDR354W	YLR049C	Q12110	428 aa		4.84	□□□□□ -1.63
TRP4	YDR354W	IRC20	Q06554	1556 aa		4.83	□□□□□ -1.64
TRP4	YDR354W	VTH1	P40438	1549 aa		4.83	□□□□□ -1.64
TRP4	YDR354W	VTH2	P40890	1549 aa		4.83	□□□□□ -1.64
TRP4	YDR354W	IKI3	Q06706	1349 aa	Known RBP	4.83	□□□□□ -1.64
TRP4	YDR354W	PGI1	P12709	554 aa	Known RBP	4.83	□□□□□ -1.64
TRP4	YDR354W	SRP54	P20424	541 aa	Known RBP	4.83	□□□□□ -1.64
TRP4	YDR354W	SUB1	P54000	292 aa	Known RBP	4.83	□□□□□ -1.64
TRP4	YDR354W	SWF1	Q04629	336 aa		4.83	□□□□□ -1.64
TRP4	YDR354W	GCN2	P15442	1659 aa		4.83	□□□□□ -1.64
TRP4	YDR354W	YFL068W	P0CX99	160 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	YLL066W-A	P0CY00	160 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	YLL067W-A	P0CY01	160 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	SPO16	P17122	198 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	MRPL36	P36531	177 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	IFA38	P38286	347 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	NPR3	P38742	1146 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	TES1	P41903	349 aa	Known RBP	4.82	□□□□□ -1.64
TRP4	YDR354W	COG1	P53079	417 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	CSL4	P53859	292 aa	Predicted RBP	4.82	□□□□□ -1.64
TRP4	YDR354W	MRPL13	Q02204	264 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	CAC2	Q04199	468 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	CRN1	Q06440	651 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	POS5	Q06892	414 aa		4.82	□□□□□ -1.64
TRP4	YDR354W	TMA16	Q08687	178 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms