RNA–Protein interactions for RNA: tR(CCU)J

HSX1, Transcript of Arginine tRNA (tRNA-Arg), predicted by tRNAscan-SE analysis, yeastyeast

Gene HSX1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSX1tR(CCU)J REG1Q00816 1014 aa5.54□□□□□ -1.52
HSX1tR(CCU)J SLU7Q02775 382 aaKnown RBP5.54□□□□□ -1.52
HSX1tR(CCU)J YDR131CQ03899 556 aa5.54□□□□□ -1.52
HSX1tR(CCU)J YDR132CQ03900 495 aa5.54□□□□□ -1.52
HSX1tR(CCU)J YML053CQ04978 212 aa5.54□□□□□ -1.52
HSX1tR(CCU)J SLD7Q08457 257 aa5.54□□□□□ -1.52
HSX1tR(CCU)J YLR149CQ99296 730 aa5.54□□□□□ -1.52
HSX1tR(CCU)J ILS1P09436 1072 aaKnown RBP5.53□□□□□ -1.52
HSX1tR(CCU)J RBK1P25332 333 aa5.53□□□□□ -1.52
HSX1tR(CCU)J DCC1P25559 380 aa5.53□□□□□ -1.52
HSX1tR(CCU)J URA10P30402 227 aa5.53□□□□□ -1.52
HSX1tR(CCU)J CCR4P31384 837 aaKnown RBP5.53□□□□□ -1.52
HSX1tR(CCU)J YME1P32795 747 aa5.53□□□□□ -1.52
HSX1tR(CCU)J CTF13P35203 478 aa5.53□□□□□ -1.52
HSX1tR(CCU)J SEO1P39709 593 aa5.53□□□□□ -1.52
HSX1tR(CCU)J SER33P40510 469 aa5.53□□□□□ -1.52
HSX1tR(CCU)J ALA1P40825 983 aaKnown RBP5.53□□□□□ -1.52
HSX1tR(CCU)J REF2P42073 533 aaPredicted RBP5.53□□□□□ -1.52
HSX1tR(CCU)J YFL012WP43580 148 aa5.53□□□□□ -1.52
HSX1tR(CCU)J PRP31P49704 494 aaPredicted RBP5.53□□□□□ -1.52
HSX1tR(CCU)J SAP4P53036 818 aa5.53□□□□□ -1.52
HSX1tR(CCU)J SPC105P53148 917 aa5.53□□□□□ -1.52
HSX1tR(CCU)J EFM6P53970 246 aa5.53□□□□□ -1.52
HSX1tR(CCU)J SHR3Q02774 210 aa5.53□□□□□ -1.52
HSX1tR(CCU)J PPN1Q04119 674 aa5.53□□□□□ -1.52
HSX1tR(CCU)J MCP2Q06567 569 aa5.53□□□□□ -1.52
HSX1tR(CCU)J LDB17Q12342 491 aa5.53□□□□□ -1.52
HSX1tR(CCU)J TEF1P02994 458 aaKnown RBP5.52□□□□□ -1.53
HSX1tR(CCU)J CHL1P22516 861 aaPredicted RBP5.52□□□□□ -1.53
HSX1tR(CCU)J KAR4P25583 335 aa5.52□□□□□ -1.53
HSX1tR(CCU)J YCL068CP25593 260 aa5.52□□□□□ -1.53
HSX1tR(CCU)J BRF1P29056 596 aa5.52□□□□□ -1.53
HSX1tR(CCU)J IMP3P32899 183 aaPredicted RBP5.52□□□□□ -1.53
HSX1tR(CCU)J PHO11P35842 467 aa5.52□□□□□ -1.53
HSX1tR(CCU)J TCD2P36101 447 aaKnown RBP5.52□□□□□ -1.53
HSX1tR(CCU)J IRS4P36115 615 aaKnown RBP5.52□□□□□ -1.53
HSX1tR(CCU)J MRP21P38175 177 aa5.52□□□□□ -1.53
HSX1tR(CCU)J PHO12P38693 467 aa5.52□□□□□ -1.53
HSX1tR(CCU)J PPX1P38698 397 aa5.52□□□□□ -1.53
HSX1tR(CCU)J YHR078WP38799 552 aa5.52□□□□□ -1.53
HSX1tR(CCU)J RPH1P39956 796 aa5.52□□□□□ -1.53
HSX1tR(CCU)J RGI2P40188 164 aa5.52□□□□□ -1.53
HSX1tR(CCU)J YJR061WP40355 935 aa5.52□□□□□ -1.53
HSX1tR(CCU)J MTO1P53070 669 aa5.52□□□□□ -1.53
HSX1tR(CCU)J NPY1P53164 384 aa5.52□□□□□ -1.53
HSX1tR(CCU)J SMA1Q02651 245 aa5.52□□□□□ -1.53
HSX1tR(CCU)J YMR178WQ03219 274 aaKnown RBP5.52□□□□□ -1.53
HSX1tR(CCU)J TRS31Q03337 283 aa5.52□□□□□ -1.53
HSX1tR(CCU)J NHX1Q04121 633 aa5.52□□□□□ -1.53
HSX1tR(CCU)J GSF2Q04697 403 aaKnown RBP5.52□□□□□ -1.53
HSX1tR(CCU)J PNP1Q05788 311 aa5.52□□□□□ -1.53
HSX1tR(CCU)J ADE13Q05911 482 aaKnown RBP5.52□□□□□ -1.53
HSX1tR(CCU)J JIP5Q06214 492 aaPredicted RBP5.52□□□□□ -1.53
HSX1tR(CCU)J HBT1Q07653 1046 aaKnown RBP5.52□□□□□ -1.53
HSX1tR(CCU)J ADY3Q07732 790 aa5.52□□□□□ -1.53
HSX1tR(CCU)J FRA1Q07825 749 aa5.52□□□□□ -1.53
HSX1tR(CCU)J BUD20Q08004 166 aaPredicted RBP5.52□□□□□ -1.53
HSX1tR(CCU)J SAM4Q08985 325 aaKnown RBP5.52□□□□□ -1.53
HSX1tR(CCU)J RMD5Q12508 421 aa5.52□□□□□ -1.53
HSX1tR(CCU)J RAD3P06839 778 aa5.51□□□□□ -1.53
HSX1tR(CCU)J GPA2P10823 449 aa5.51□□□□□ -1.53
HSX1tR(CCU)J ATP12P22135 325 aa5.51□□□□□ -1.53
HSX1tR(CCU)J UBA1P22515 1024 aaKnown RBP5.51□□□□□ -1.53
HSX1tR(CCU)J AMS1P22855 1083 aa5.51□□□□□ -1.53
HSX1tR(CCU)J BEM3P32873 1128 aa5.51□□□□□ -1.53
HSX1tR(CCU)J YKL151CP36059 337 aa5.51□□□□□ -1.53
HSX1tR(CCU)J LDB7P38210 180 aa5.51□□□□□ -1.53
HSX1tR(CCU)J GND1P38720 489 aaKnown RBP5.51□□□□□ -1.53
HSX1tR(CCU)J WSC4P38739 605 aa5.51□□□□□ -1.53
HSX1tR(CCU)J LRP1P38801 184 aaKnown RBP5.51□□□□□ -1.53
HSX1tR(CCU)J PCF11P39081 626 aaPredicted RBP5.51□□□□□ -1.53
HSX1tR(CCU)J SMX2P40204 77 aaKnown RBP5.51□□□□□ -1.53
HSX1tR(CCU)J TES1P41903 349 aaKnown RBP5.51□□□□□ -1.53
HSX1tR(CCU)J PXA1P41909 870 aa5.51□□□□□ -1.53
HSX1tR(CCU)J CCT8P47079 568 aaKnown RBP5.51□□□□□ -1.53
HSX1tR(CCU)J CSN12P47130 423 aa5.51□□□□□ -1.53
HSX1tR(CCU)J COG7P53195 279 aa5.51□□□□□ -1.53
HSX1tR(CCU)J PEX8P53248 589 aa5.51□□□□□ -1.53
HSX1tR(CCU)J YNL143CP53908 130 aa5.51□□□□□ -1.53
HSX1tR(CCU)J AQR1P53943 586 aa5.51□□□□□ -1.53
HSX1tR(CCU)J TFB2Q02939 513 aa5.51□□□□□ -1.53
HSX1tR(CCU)J RPC11Q04307 110 aaPredicted RBP5.51□□□□□ -1.53
HSX1tR(CCU)J MFB1Q04922 465 aa5.51□□□□□ -1.53
HSX1tR(CCU)J RAD1P06777 1100 aa5.5□□□□□ -1.53
HSX1tR(CCU)J MPH2P0CD99 609 aa5.5□□□□□ -1.53
HSX1tR(CCU)J HSP26P15992 214 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
HSX1tR(CCU)J APA1P16550 321 aaKnown RBP5.5□□□□□ -1.53
HSX1tR(CCU)J GAL11P19659 1081 aa5.5□□□□□ -1.53
HSX1tR(CCU)J MRPL25P23369 157 aa5.5□□□□□ -1.53
HSX1tR(CCU)J RML2P32611 393 aa5.5□□□□□ -1.53
HSX1tR(CCU)J GDA1P32621 518 aa5.5□□□□□ -1.53
HSX1tR(CCU)J MAK5P38112 773 aaPredicted RBP5.5□□□□□ -1.53
HSX1tR(CCU)J YSW1P38280 609 aa5.5□□□□□ -1.53
HSX1tR(CCU)J BAT1P38891 393 aaKnown RBP5.5□□□□□ -1.53
HSX1tR(CCU)J STN1P38960 494 aa5.5□□□□□ -1.53
HSX1tR(CCU)J MNN1P39106 762 aa5.5□□□□□ -1.53
HSX1tR(CCU)J TIM17P39515 158 aa5.5□□□□□ -1.53
HSX1tR(CCU)J MEF2P39677 819 aa5.5□□□□□ -1.53
HSX1tR(CCU)J GIP4P39732 760 aa5.5□□□□□ -1.53
HSX1tR(CCU)J SLX8P40072 274 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms