RNA–Protein interactions for RNA: YOR021C

SFM1, Transcript of SPOUT methyltransferase, yeast

Gene SFM1, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFM1	YOR021C	YDR109C	Q04585	715 aa		3.19	□□□□□ -1.9
SFM1	YOR021C	RAD34	Q06665	692 aa		3.19	□□□□□ -1.9
SFM1	YOR021C	YDL121C	Q07541	149 aa		3.19	□□□□□ -1.9
SFM1	YOR021C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
SFM1	YOR021C	YSP3	P25036	478 aa		3.18	□□□□□ -1.9
SFM1	YOR021C	DPB3	P27344	201 aa		3.18	□□□□□ -1.9
SFM1	YOR021C	LAC1	P28496	418 aa		3.18	□□□□□ -1.9
SFM1	YOR021C	RPF2	P36160	344 aa	Known RBP	3.18	□□□□□ -1.9
SFM1	YOR021C	VBA2	P38358	474 aa	Known RBP	3.18	□□□□□ -1.9
SFM1	YOR021C	UME6	P39001	836 aa		3.18	□□□□□ -1.9
SFM1	YOR021C	ERV46	P39727	415 aa		3.18	□□□□□ -1.9
SFM1	YOR021C	FUN12	P39730	1002 aa	Known RBP	3.18	□□□□□ -1.9
SFM1	YOR021C	YER010C	P40011	234 aa		3.18	□□□□□ -1.9
SFM1	YOR021C	FMP10	P40098	244 aa		3.18	□□□□□ -1.9
SFM1	YOR021C	ATP23	P53722	227 aa		3.18	□□□□□ -1.9
SFM1	YOR021C	YNR061C	P53747	219 aa		3.18	□□□□□ -1.9
SFM1	YOR021C	GTB1	Q04924	702 aa		3.18	□□□□□ -1.9
SFM1	YOR021C	YMR084W	A2P2R3	262 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	ERG8	P24521	451 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	SWC3	P31376	625 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	GSH1	P32477	678 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	CNS1	P33313	385 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	KES1	P35844	434 aa	Known RBP	3.17	□□□□□ -1.9
SFM1	YOR021C	MUD2	P36084	527 aa	Known RBP	3.17	□□□□□ -1.9
SFM1	YOR021C	OPT1	P40897	799 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	MSY1	P48527	492 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	YPR003C	P53394	754 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	CBK1	P53894	756 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	ADE16	P54113	591 aa	Known RBP	3.17	□□□□□ -1.9
SFM1	YOR021C	ORM2	Q06144	216 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	SWT1	Q12104	458 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	YLR111W	Q12528	110 aa		3.17	□□□□□ -1.9
SFM1	YOR021C	YLR302C	O13544	120 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	ILV2	P07342	687 aa	Known RBP	3.16	□□□□□ -1.9
SFM1	YOR021C	PCT1	P13259	424 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	MAK32	P23060	363 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	LRE1	P25579	583 aa	Known RBP	3.16	□□□□□ -1.9
SFM1	YOR021C	GSY2	P27472	705 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	NUP120	P35729	1037 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	HES1	P35843	434 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	KAP123	P40069	1113 aa	Known RBP	3.16	□□□□□ -1.9
SFM1	YOR021C	RAD26	P40352	1085 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	YIL161W	P40449	235 aa	Known RBP	3.16	□□□□□ -1.9
SFM1	YOR021C	IST3	P40565	148 aa	Predicted RBP	3.16	□□□□□ -1.9
SFM1	YOR021C	UBX6	P47049	396 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	YAT1	P80235	687 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	AAT1	Q01802	451 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	YOR389W	Q08912	624 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	YDR056C	Q12025	205 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	YOL087C	Q99247	1116 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	YOR019W	Q99248	730 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	VCX1	Q99385	411 aa		3.16	□□□□□ -1.9
SFM1	YOR021C	RER1	P25560	188 aa		3.15	□□□□□ -1.91
SFM1	YOR021C	PTC6	P25646	442 aa		3.15	□□□□□ -1.91
SFM1	YOR021C	MRP20	P32387	263 aa		3.15	□□□□□ -1.91
SFM1	YOR021C	RPT3	P33298	428 aa	Known RBP	3.15	□□□□□ -1.91
SFM1	YOR021C	YEL068C	P39977	110 aa		3.15	□□□□□ -1.91
SFM1	YOR021C	RIC1	P40395	1056 aa		3.15	□□□□□ -1.91
SFM1	YOR021C	PFK26	P40433	827 aa	Known RBP	3.15	□□□□□ -1.91
SFM1	YOR021C	ASE1	P50275	885 aa		3.15	□□□□□ -1.91
SFM1	YOR021C	YMR018W	Q04364	514 aa		3.15	□□□□□ -1.91
SFM1	YOR021C	SWA2	Q06677	668 aa		3.15	□□□□□ -1.91
SFM1	YOR021C	VIP1	Q06685	1146 aa	Known RBP	3.15	□□□□□ -1.91
SFM1	YOR021C	PSK2	Q08217	1101 aa		3.15	□□□□□ -1.91
SFM1	YOR021C	YPL191C	Q08930	360 aa		3.15	□□□□□ -1.91
SFM1	YOR021C	RDL1	Q12305	139 aa	Known RBP	3.15	□□□□□ -1.91
SFM1	YOR021C	NKP1	Q12493	238 aa		3.15	□□□□□ -1.91
SFM1	YOR021C	CBF2	P32504	956 aa		3.14	□□□□□ -1.91
SFM1	YOR021C	UBP13	P38187	747 aa		3.14	□□□□□ -1.91
SFM1	YOR021C	FTH1	P38310	465 aa		3.14	□□□□□ -1.91
SFM1	YOR021C	MNT3	P40549	630 aa		3.14	□□□□□ -1.91
SFM1	YOR021C	CIN1	P40987	1014 aa		3.14	□□□□□ -1.91
SFM1	YOR021C	SWP82	P43554	623 aa		3.14	□□□□□ -1.91
SFM1	YOR021C	YPL071C	Q02864	156 aa		3.14	□□□□□ -1.91
SFM1	YOR021C	CRN1	Q06440	651 aa		3.14	□□□□□ -1.91
SFM1	YOR021C	BSP1	Q06604	576 aa		3.14	□□□□□ -1.91
SFM1	YOR021C	LEA1	Q08963	238 aa	Predicted RBP	3.14	□□□□□ -1.91
SFM1	YOR021C	BI2	P03873	423 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	SPO16	P17122	198 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	ALY1	P36117	915 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	DJP1	P40564	432 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	LYS14	P40971	790 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	CIR1	P42940	261 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	NMD5	P46970	1048 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	RIP-Chip
SFM1	YOR021C	RSC9	Q03124	581 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	SNU56	Q03782	492 aa	Known RBP	3.13	□□□□□ -1.91
SFM1	YOR021C	TPO3	Q06451	622 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	SPN1	Q06505	410 aa	Predicted RBP	3.13	□□□□□ -1.91
SFM1	YOR021C	ATG23	Q06671	453 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	ENT4	Q07872	247 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	LYS21	Q12122	440 aa	Known RBP	3.13	□□□□□ -1.91
SFM1	YOR021C	BAG7	Q12128	409 aa		3.13	□□□□□ -1.91
SFM1	YOR021C	YER145C-A	A0A023PYF4	145 aa		3.12	□□□□□ -1.91
SFM1	YOR021C	FUM1	P08417	488 aa	Known RBP	3.12	□□□□□ -1.91
SFM1	YOR021C	RPB2	P08518	1224 aa	Known RBP	3.12	□□□□□ -1.91
SFM1	YOR021C	YMR085W	P0CF18	432 aa		3.12	□□□□□ -1.91
SFM1	YOR021C	AAC3	P18238	307 aa		3.12	□□□□□ -1.91
SFM1	YOR021C	SRP54	P20424	541 aa	Known RBP	3.12	□□□□□ -1.91
SFM1	YOR021C	SAN1	P22470	610 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms