RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C EXO84P38261 753 aa3.66□□□□□ -1.82
VPS33YLR396C NPR3P38742 1146 aa3.66□□□□□ -1.82
VPS33YLR396C VPS60Q03390 229 aa3.66□□□□□ -1.82
VPS33YLR396C AHA1Q12449 350 aaKnown RBP3.66□□□□□ -1.82
VPS33YLR396C DAL5P15365 543 aa3.65□□□□□ -1.83
VPS33YLR396C UBC1P21734 215 aaKnown RBP3.65□□□□□ -1.83
VPS33YLR396C PDE1P22434 369 aa3.65□□□□□ -1.83
VPS33YLR396C MTG2P38860 518 aa3.65□□□□□ -1.83
VPS33YLR396C FAF1P40546 346 aaPredicted RBP3.65□□□□□ -1.83
VPS33YLR396C VPS4P52917 437 aa3.65□□□□□ -1.83
VPS33YLR396C COG2P53271 262 aa3.65□□□□□ -1.83
VPS33YLR396C PRP3Q03338 469 aaPredicted RBP3.65□□□□□ -1.83
VPS33YLR396C HRD3Q05787 833 aa3.65□□□□□ -1.83
VPS33YLR396C SLK19Q08581 821 aaKnown RBP3.65□□□□□ -1.83
VPS33YLR396C AI5_ALPHAQ9ZZX1 630 aa3.65□□□□□ -1.83
VPS33YLR396C MDS3P53094 1487 aa3.65□□□□□ -1.83
VPS33YLR396C LTE1P07866 1435 aa3.65□□□□□ -1.83
VPS33YLR396C MET5P47169 1442 aa3.65□□□□□ -1.83
VPS33YLR396C NUC1P08466 329 aa3.64□□□□□ -1.83
VPS33YLR396C AQY1P0CD91 305 aa3.64□□□□□ -1.83
VPS33YLR396C RRP43P25359 394 aaPredicted RBP3.64□□□□□ -1.83
VPS33YLR396C URK1P27515 501 aa3.64□□□□□ -1.83
VPS33YLR396C RPC34P32910 317 aa3.64□□□□□ -1.83
VPS33YLR396C XRS2P33301 854 aa3.64□□□□□ -1.83
VPS33YLR396C BYE1P36106 594 aa3.64□□□□□ -1.83
VPS33YLR396C IFA38P38286 347 aa3.64□□□□□ -1.83
VPS33YLR396C BUD16P39988 312 aa3.64□□□□□ -1.83
VPS33YLR396C PSF2P40359 213 aa3.64□□□□□ -1.83
VPS33YLR396C IMO32P53219 342 aa3.64□□□□□ -1.83
VPS33YLR396C BUD21Q08492 214 aaPredicted RBP3.64□□□□□ -1.83
VPS33YLR396C OSW1Q08692 278 aa3.64□□□□□ -1.83
VPS33YLR396C PNO1Q99216 274 aaKnown RBP3.64□□□□□ -1.83
VPS33YLR396C DOP1Q03921 1698 aa3.64□□□□□ -1.83
VPS33YLR396C BEM3P32873 1128 aa3.64□□□□□ -1.83
VPS33YLR396C SMK1P41808 388 aa3.64□□□□□ -1.83
VPS33YLR396C GTR1Q00582 310 aa3.64□□□□□ -1.83
VPS33YLR396C PLM2Q04383 521 aa3.64□□□□□ -1.83
VPS33YLR396C GTB1Q04924 702 aa3.64□□□□□ -1.83
VPS33YLR396C YML053CQ04978 212 aa3.64□□□□□ -1.83
VPS33YLR396C MRI1Q06489 411 aaKnown RBP3.64□□□□□ -1.83
VPS33YLR396C VAM6Q07468 1049 aa3.64□□□□□ -1.83
VPS33YLR396C RAD9P14737 1309 aa3.64□□□□□ -1.83
VPS33YLR396C YOR093CQ12275 1648 aa3.64□□□□□ -1.83
VPS33YLR396C TY1B-JR2P47100 1755 aaKnown RBP3.63□□□□□ -1.83
VPS33YLR396C TY1B-ER2Q03619 1755 aa3.63□□□□□ -1.83
VPS33YLR396C TY1B-MR1Q04214 1755 aa3.63□□□□□ -1.83
VPS33YLR396C TY1B-MR2Q04670 1755 aaKnown RBP3.63□□□□□ -1.83
VPS33YLR396C TY1B-LR1Q12088 1755 aaKnown RBP3.63□□□□□ -1.83
VPS33YLR396C TY1B-NL1Q12112 1755 aa3.63□□□□□ -1.83
VPS33YLR396C TY1B-GR1Q12141 1755 aa3.63□□□□□ -1.83
VPS33YLR396C TY1B-BRQ12193 1756 aa3.63□□□□□ -1.83
VPS33YLR396C TY1B-GR3Q12316 1755 aa3.63□□□□□ -1.83
VPS33YLR396C TY1B-BLQ12490 1755 aa3.63□□□□□ -1.83
VPS33YLR396C TY1B-ORQ92393 1755 aa3.63□□□□□ -1.83
VPS33YLR396C GSY2P27472 705 aa3.63□□□□□ -1.83
VPS33YLR396C SWC3P31376 625 aa3.63□□□□□ -1.83
VPS33YLR396C MIC60P36112 540 aa3.63□□□□□ -1.83
VPS33YLR396C PSY4P38193 441 aa3.63□□□□□ -1.83
VPS33YLR396C ERC1P38767 581 aa3.63□□□□□ -1.83
VPS33YLR396C SAP1P39955 897 aaKnown RBP3.63□□□□□ -1.83
VPS33YLR396C TAX4P47030 604 aa3.63□□□□□ -1.83
VPS33YLR396C BNA1P47096 177 aa3.63□□□□□ -1.83
VPS33YLR396C CYK3Q07533 885 aa3.63□□□□□ -1.83
VPS33YLR396C PRS5Q12265 496 aaKnown RBP3.63□□□□□ -1.83
VPS33YLR396C SFI1Q12369 946 aa3.63□□□□□ -1.83
VPS33YLR396C DPB3P27344 201 aa3.63□□□□□ -1.83
VPS33YLR396C MRPL36P36531 177 aa3.63□□□□□ -1.83
VPS33YLR396C CIR1P42940 261 aa3.63□□□□□ -1.83
VPS33YLR396C SAE2P46946 345 aa3.63□□□□□ -1.83
VPS33YLR396C ZAP1P47043 880 aa3.63□□□□□ -1.83
VPS33YLR396C YJL043WP47053 257 aa3.63□□□□□ -1.83
VPS33YLR396C NPA3P47122 385 aa3.63□□□□□ -1.83
VPS33YLR396C CTF18P49956 741 aa3.63□□□□□ -1.83
VPS33YLR396C MTG1Q03151 367 aaPredicted RBP3.63□□□□□ -1.83
VPS33YLR396C CSR1Q06705 408 aaKnown RBP3.63□□□□□ -1.83
VPS33YLR396C ETT1Q08421 412 aaKnown RBP3.63□□□□□ -1.83
VPS33YLR396C YPL191CQ08930 360 aa3.63□□□□□ -1.83
VPS33YLR396C NDJ1Q12366 352 aa3.63□□□□□ -1.83
VPS33YLR396C HSP82P02829 709 aaKnown RBP3.62□□□□□ -1.83
VPS33YLR396C SES1P07284 462 aaKnown RBP3.62□□□□□ -1.83
VPS33YLR396C RPN12P32496 274 aa3.62□□□□□ -1.83
VPS33YLR396C KES1P35844 434 aaKnown RBP3.62□□□□□ -1.83
VPS33YLR396C CUE2P36075 443 aaKnown RBP3.62□□□□□ -1.83
VPS33YLR396C HOT13P36078 116 aa3.62□□□□□ -1.83
VPS33YLR396C RPF2P36160 344 aaKnown RBP3.62□□□□□ -1.83
VPS33YLR396C ATF1P40353 525 aa3.62□□□□□ -1.83
VPS33YLR396C SKP2P42843 763 aa3.62□□□□□ -1.83
VPS33YLR396C RRT6P53117 311 aaPredicted RBP3.62□□□□□ -1.83
VPS33YLR396C YGR079WP53249 370 aa3.62□□□□□ -1.83
VPS33YLR396C YML131WQ03102 365 aa3.62□□□□□ -1.83
VPS33YLR396C YOL087CQ99247 1116 aa3.62□□□□□ -1.83
VPS33YLR396C SIP1P32578 815 aa3.61□□□□□ -1.83
VPS33YLR396C PEX2P32800 271 aa3.61□□□□□ -1.83
VPS33YLR396C GEX2P36173 615 aa3.61□□□□□ -1.83
VPS33YLR396C VBA2P38358 474 aaKnown RBP3.61□□□□□ -1.83
VPS33YLR396C YMR102CQ03177 834 aa3.61□□□□□ -1.83
VPS33YLR396C ECM16Q04217 1267 aaKnown RBP3.61□□□□□ -1.83
VPS33YLR396C STP3Q05937 343 aa3.61□□□□□ -1.83
VPS33YLR396C SPN1Q06505 410 aaPredicted RBP3.61□□□□□ -1.83
VPS33YLR396C PCD1Q12524 340 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms