RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W YER158CP40095 573 aa4.04□□□□□ -1.76
SSL1YLR005W YJR079WP47126 109 aa4.04□□□□□ -1.76
SSL1YLR005W PYK2P52489 506 aaKnown RBP4.04□□□□□ -1.76
SSL1YLR005W EXG2P52911 562 aa4.04□□□□□ -1.76
SSL1YLR005W COQ6P53318 479 aa4.04□□□□□ -1.76
SSL1YLR005W NPC2Q12408 173 aa4.04□□□□□ -1.76
SSL1YLR005W CSF1Q12150 2958 aa4.04□□□□□ -1.76
SSL1YLR005W GCN1P33892 2672 aaKnown RBP4.04□□□□□ -1.76
SSL1YLR005W IME1P21190 360 aa4.03□□□□□ -1.76
SSL1YLR005W NPP1P25353 742 aa4.03□□□□□ -1.76
SSL1YLR005W CCR4P31384 837 aaKnown RBP4.03□□□□□ -1.76
SSL1YLR005W SAC6P32599 642 aaKnown RBP4.03□□□□□ -1.76
SSL1YLR005W TYE7P33122 291 aaPredicted RBP4.03□□□□□ -1.76
SSL1YLR005W MRPL40P36534 297 aa4.03□□□□□ -1.76
SSL1YLR005W CDC1P40986 491 aa4.03□□□□□ -1.76
SSL1YLR005W IML2P47031 731 aa4.03□□□□□ -1.76
SSL1YLR005W NNF1P47149 201 aa4.03□□□□□ -1.76
SSL1YLR005W MND1P53102 219 aa4.03□□□□□ -1.76
SSL1YLR005W PPM1Q04081 328 aa4.03□□□□□ -1.76
SSL1YLR005W HRD3Q05787 833 aa4.03□□□□□ -1.76
SSL1YLR005W ECM38Q05902 660 aaPredicted RBP4.03□□□□□ -1.76
SSL1YLR005W YPL216WQ08964 1102 aa4.03□□□□□ -1.76
SSL1YLR005W SLX4Q12098 748 aa4.03□□□□□ -1.76
SSL1YLR005W AI5_BETAQ9ZZX0 354 aa4.03□□□□□ -1.76
SSL1YLR005W POL2P21951 2222 aaKnown RBP4.03□□□□□ -1.76
SSL1YLR005W PRP8P33334 2413 aaKnown RBP4.03□□□□□ -1.76
SSL1YLR005W JIP3O13555 125 aa4.02□□□□□ -1.77
SSL1YLR005W MSF1P08425 469 aa4.02□□□□□ -1.77
SSL1YLR005W PYC1P11154 1178 aaKnown RBP4.02□□□□□ -1.77
SSL1YLR005W AEP2P22136 580 aa4.02□□□□□ -1.77
SSL1YLR005W AAR2P32357 355 aaPredicted RBP4.02□□□□□ -1.77
SSL1YLR005W SAP190P36123 1033 aa4.02□□□□□ -1.77
SSL1YLR005W EFM2P38347 419 aa4.02□□□□□ -1.77
SSL1YLR005W BCD1P38772 366 aa4.02□□□□□ -1.77
SSL1YLR005W CRP1P38845 465 aaKnown RBP4.02□□□□□ -1.77
SSL1YLR005W SAK1P38990 1142 aa4.02□□□□□ -1.77
SSL1YLR005W CIR1P42940 261 aa4.02□□□□□ -1.77
SSL1YLR005W GUS1P46655 708 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
SSL1YLR005W AIM23P47015 356 aa4.02□□□□□ -1.77
SSL1YLR005W COQ5P49017 307 aa4.02□□□□□ -1.77
SSL1YLR005W YGL036WP53185 909 aaPredicted RBP4.02□□□□□ -1.77
SSL1YLR005W PIR3Q03180 325 aa4.02□□□□□ -1.77
SSL1YLR005W ARO80Q04052 950 aa4.02□□□□□ -1.77
SSL1YLR005W SHE9Q04172 456 aa4.02□□□□□ -1.77
SSL1YLR005W YSH1Q06224 779 aaPredicted RBP4.02□□□□□ -1.77
SSL1YLR005W AIM39Q08223 395 aa4.02□□□□□ -1.77
SSL1YLR005W LAS17Q12446 633 aa4.02□□□□□ -1.77
SSL1YLR005W RAD3P06839 778 aa4.02□□□□□ -1.77
SSL1YLR005W HRR25P29295 494 aaKnown RBP4.02□□□□□ -1.77
SSL1YLR005W PDR3P33200 976 aa4.02□□□□□ -1.77
SSL1YLR005W YRO2P38079 344 aa4.02□□□□□ -1.77
SSL1YLR005W TSL1P38427 1098 aaKnown RBP4.02□□□□□ -1.77
SSL1YLR005W EXO1P39875 702 aa4.02□□□□□ -1.77
SSL1YLR005W UBP7P40453 1071 aa4.02□□□□□ -1.77
SSL1YLR005W URM1P40554 99 aaPredicted RBP4.02□□□□□ -1.77
SSL1YLR005W PFD1P46988 109 aa4.02□□□□□ -1.77
SSL1YLR005W RTT101P47050 842 aa4.02□□□□□ -1.77
SSL1YLR005W MRX6P48564 524 aa4.02□□□□□ -1.77
SSL1YLR005W HOP2P53187 214 aa4.02□□□□□ -1.77
SSL1YLR005W DRN1P53255 507 aaKnown RBP4.02□□□□□ -1.77
SSL1YLR005W SMA1Q02651 245 aa4.02□□□□□ -1.77
SSL1YLR005W YMR206WQ03695 313 aa4.02□□□□□ -1.77
SSL1YLR005W AIM32Q04689 311 aa4.02□□□□□ -1.77
SSL1YLR005W TAF9Q05027 157 aa4.02□□□□□ -1.77
SSL1YLR005W YDL073WQ07454 984 aa4.02□□□□□ -1.77
SSL1YLR005W ETT1Q08421 412 aaKnown RBP4.02□□□□□ -1.77
SSL1YLR005W RPN8Q08723 338 aaKnown RBP4.02□□□□□ -1.77
SSL1YLR005W RTK1Q12100 620 aaPredicted RBP4.02□□□□□ -1.77
SSL1YLR005W LCB4Q12246 624 aa4.02□□□□□ -1.77
SSL1YLR005W COX3P00420 269 aa4.01□□□□□ -1.77
SSL1YLR005W RPP2AP05319 106 aaKnown RBP4.01□□□□□ -1.77
SSL1YLR005W RPS3P05750 240 aaKnown RBP4.01□□□□□ -1.77
SSL1YLR005W KAR4P25583 335 aa4.01□□□□□ -1.77
SSL1YLR005W PXA2P34230 853 aa4.01□□□□□ -1.77
SSL1YLR005W CSG2P35206 410 aa4.01□□□□□ -1.77
SSL1YLR005W CHS7P38843 316 aa4.01□□□□□ -1.77
SSL1YLR005W HYR1P40581 163 aaKnown RBP4.01□□□□□ -1.77
SSL1YLR005W YPT11P48559 417 aa4.01□□□□□ -1.77
SSL1YLR005W PRP24P49960 444 aaKnown RBP4.01□□□□□ -1.77
SSL1YLR005W YAT1P80235 687 aa4.01□□□□□ -1.77
SSL1YLR005W SPG3Q04398 127 aaPredicted RBP4.01□□□□□ -1.77
SSL1YLR005W YLR297WQ05899 129 aa4.01□□□□□ -1.77
SSL1YLR005W YOR387CQ08910 206 aa4.01□□□□□ -1.77
SSL1YLR005W VPS54Q12071 889 aa4.01□□□□□ -1.77
SSL1YLR005W UPC2Q12151 913 aa4.01□□□□□ -1.77
SSL1YLR005W ADE8P04161 214 aa4□□□□□ -1.77
SSL1YLR005W PPR1P07272 904 aaPredicted RBP4□□□□□ -1.77
SSL1YLR005W ERG6P25087 383 aaKnown RBP4□□□□□ -1.77
SSL1YLR005W SFP1P32432 683 aa4□□□□□ -1.77
SSL1YLR005W SEC6P32844 805 aa4□□□□□ -1.77
SSL1YLR005W AFR1P33304 620 aa4□□□□□ -1.77
SSL1YLR005W UTH1P36135 365 aa4□□□□□ -1.77
SSL1YLR005W LEU5P38702 357 aa4□□□□□ -1.77
SSL1YLR005W NPR3P38742 1146 aa4□□□□□ -1.77
SSL1YLR005W ASG1P40467 964 aa4□□□□□ -1.77
SSL1YLR005W SDS3P40505 327 aa4□□□□□ -1.77
SSL1YLR005W DSN1P40568 576 aa4□□□□□ -1.77
SSL1YLR005W YIR014WP40570 242 aa4□□□□□ -1.77
SSL1YLR005W BST1P43571 1029 aa4□□□□□ -1.77
SSL1YLR005W RAI1P53063 387 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms