RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W YDR286CQ05530 114 aa2.54□□□□□ -2
SNU114YKL173W HOS1Q12214 470 aa2.54□□□□□ -2
SNU114YKL173W GRX6Q12438 231 aa2.54□□□□□ -2
SNU114YKL173W ARG3P05150 338 aa2.54□□□□□ -2
SNU114YKL173W PCK1P10963 549 aa2.54□□□□□ -2
SNU114YKL173W PGS1P25578 521 aa2.54□□□□□ -2
SNU114YKL173W RPS7AP26786 190 aaKnown RBP2.54□□□□□ -2
SNU114YKL173W REV7P38927 245 aa2.54□□□□□ -2
SNU114YKL173W YJR061WP40355 935 aa2.54□□□□□ -2
SNU114YKL173W LYS4P49367 693 aaPredicted RBP2.54□□□□□ -2
SNU114YKL173W YML6P51998 286 aa2.54□□□□□ -2
SNU114YKL173W INN1P53901 409 aa2.54□□□□□ -2
SNU114YKL173W NGL2Q03264 515 aaKnown RBP2.54□□□□□ -2
SNU114YKL173W VBA4Q04602 768 aaKnown RBP2.54□□□□□ -2
SNU114YKL173W NDJ1Q12366 352 aa2.54□□□□□ -2
SNU114YKL173W GDB1Q06625 1536 aa2.54□□□□□ -2
SNU114YKL173W TY1B-AO13527 1196 aaKnown RBP2.53□□□□□ -2
SNU114YKL173W PRP28P23394 588 aa2.53□□□□□ -2
SNU114YKL173W HOS2P53096 452 aaPredicted RBP2.53□□□□□ -2
SNU114YKL173W SNF12P53628 566 aa2.53□□□□□ -2
SNU114YKL173W ZDS2P54786 942 aa2.53□□□□□ -2
SNU114YKL173W SPC19Q03954 165 aa2.53□□□□□ -2
SNU114YKL173W RAD30Q04049 632 aa2.53□□□□□ -2
SNU114YKL173W RTN2Q12443 393 aa2.53□□□□□ -2
SNU114YKL173W SPE4Q12455 300 aa2.53□□□□□ -2
SNU114YKL173W UFD4P33202 1483 aa2.53□□□□□ -2
SNU114YKL173W TY3B-GQ99315 1547 aa2.53□□□□□ -2
SNU114YKL173W FUR1P18562 216 aaKnown RBP2.53□□□□□ -2
SNU114YKL173W VPH1P32563 840 aaKnown RBP2.53□□□□□ -2
SNU114YKL173W RPT3P33298 428 aaKnown RBP2.53□□□□□ -2
SNU114YKL173W BDH2P39713 417 aa2.53□□□□□ -2
SNU114YKL173W VFA1P40080 203 aa2.53□□□□□ -2
SNU114YKL173W KHA1P40309 873 aa2.53□□□□□ -2
SNU114YKL173W LRO1P40345 661 aa2.53□□□□□ -2
SNU114YKL173W NDC80P40460 691 aa2.53□□□□□ -2
SNU114YKL173W CAB2P40506 365 aa2.53□□□□□ -2
SNU114YKL173W YFT2Q06676 274 aa2.53□□□□□ -2
SNU114YKL173W PRS5Q12265 496 aaKnown RBP2.53□□□□□ -2
SNU114YKL173W ECM5Q03214 1411 aa2.53□□□□□ -2
SNU114YKL173W TY1B-DR3Q99231 1755 aa2.53□□□□□ -2.01
SNU114YKL173W ERG20P08524 352 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W APE1P14904 514 aa2.52□□□□□ -2.01
SNU114YKL173W ERG8P24521 451 aa2.52□□□□□ -2.01
SNU114YKL173W CDC60P26637 1090 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W CAP1P28495 268 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W TEF4P36008 412 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W SRO77P38163 1010 aa2.52□□□□□ -2.01
SNU114YKL173W SQS1P53866 767 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W CTI6Q08923 506 aa2.52□□□□□ -2.01
SNU114YKL173W TAF2P23255 1407 aa2.52□□□□□ -2.01
SNU114YKL173W TY1B-JR2P47100 1755 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W TY1B-ER2Q03619 1755 aa2.52□□□□□ -2.01
SNU114YKL173W TY1B-MR1Q04214 1755 aa2.52□□□□□ -2.01
SNU114YKL173W TY1B-MR2Q04670 1755 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W TY1B-LR1Q12088 1755 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W TY1B-NL1Q12112 1755 aa2.52□□□□□ -2.01
SNU114YKL173W TY1B-GR1Q12141 1755 aa2.52□□□□□ -2.01
SNU114YKL173W TY1B-BLQ12490 1755 aa2.52□□□□□ -2.01
SNU114YKL173W RED1P14291 827 aa2.52□□□□□ -2.01
SNU114YKL173W PDX1P16451 410 aa2.52□□□□□ -2.01
SNU114YKL173W MVD1P32377 396 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W HIS7P33734 552 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W ARC1P46672 376 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W REG1Q00816 1014 aa2.52□□□□□ -2.01
SNU114YKL173W FDC1Q03034 503 aa2.52□□□□□ -2.01
SNU114YKL173W ECM22Q05958 814 aaPredicted RBP2.52□□□□□ -2.01
SNU114YKL173W ZRT2Q12436 422 aa2.52□□□□□ -2.01
SNU114YKL173W FEN2P25621 512 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W COS111P38308 924 aa2.52□□□□□ -2.01
SNU114YKL173W CCT6P39079 546 aa2.52□□□□□ -2.01
SNU114YKL173W YJL206CP39529 758 aa2.52□□□□□ -2.01
SNU114YKL173W MIT1P40002 666 aa2.52□□□□□ -2.01
SNU114YKL173W VMA13P41807 478 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W RFX1P48743 811 aa2.52□□□□□ -2.01
SNU114YKL173W RCO1Q04779 684 aa2.52□□□□□ -2.01
SNU114YKL173W RRP9Q06506 573 aaKnown RBP2.52□□□□□ -2.01
SNU114YKL173W TMA16Q08687 178 aa2.52□□□□□ -2.01
SNU114YKL173W PGC1Q08959 321 aa2.52□□□□□ -2.01
SNU114YKL173W TRM732Q03496 1420 aa2.52□□□□□ -2.01
SNU114YKL173W BNR1P40450 1375 aa2.51□□□□□ -2.01
SNU114YKL173W TPK1P06244 397 aa2.51□□□□□ -2.01
SNU114YKL173W VPS33P20795 691 aa2.51□□□□□ -2.01
SNU114YKL173W ADY2P25613 283 aa2.51□□□□□ -2.01
SNU114YKL173W CNS1P33313 385 aa2.51□□□□□ -2.01
SNU114YKL173W APT2P36973 181 aa2.51□□□□□ -2.01
SNU114YKL173W CTP1P38152 299 aa2.51□□□□□ -2.01
SNU114YKL173W TDP1P38319 544 aa2.51□□□□□ -2.01
SNU114YKL173W UME6P39001 836 aa2.51□□□□□ -2.01
SNU114YKL173W MDR1P53258 950 aa2.51□□□□□ -2.01
SNU114YKL173W MUB1Q03162 620 aa2.51□□□□□ -2.01
SNU114YKL173W USA1Q03714 838 aa2.51□□□□□ -2.01
SNU114YKL173W VPS64Q03944 604 aa2.51□□□□□ -2.01
SNU114YKL173W ARO10Q06408 635 aa2.51□□□□□ -2.01
SNU114YKL173W PNO1Q99216 274 aaKnown RBP2.51□□□□□ -2.01
SNU114YKL173W PET122P10355 254 aa2.51□□□□□ -2.01
SNU114YKL173W PFK2P16862 959 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
SNU114YKL173W ORC2P32833 620 aa2.51□□□□□ -2.01
SNU114YKL173W PAC2P39937 518 aa2.51□□□□□ -2.01
SNU114YKL173W DJP1P40564 432 aa2.51□□□□□ -2.01
SNU114YKL173W SGF73P53165 657 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 209.7 ms