RNA–Protein interactions for RNA: YGR207C

CIR1, Transcript of Mitochondrial protein that interacts with frataxin (Yfh1p), yeast

Gene CIR1, Length 786 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIR1	YGR207C	ERG13	P54839	491 aa	Known RBP	4.92	□□□□□ -1.62
CIR1	YGR207C	SWA2	Q06677	668 aa		4.92	□□□□□ -1.62
CIR1	YGR207C	TMA16	Q08687	178 aa		4.92	□□□□□ -1.62
CIR1	YGR207C	RTC1	Q08281	1341 aa		4.92	□□□□□ -1.62
CIR1	YGR207C	PGK1	P00560	416 aa	Known RBP	4.91	□□□□□ -1.62
CIR1	YGR207C	SNF1	P06782	633 aa	Known RBP	4.91	□□□□□ -1.62
CIR1	YGR207C	FLO10	P36170	1169 aa		4.91	□□□□□ -1.62
CIR1	YGR207C	VPS8	P39702	1274 aa		4.91	□□□□□ -1.62
CIR1	YGR207C	YER010C	P40011	234 aa		4.91	□□□□□ -1.62
CIR1	YGR207C	UBP7	P40453	1071 aa		4.91	□□□□□ -1.62
CIR1	YGR207C	PSP1	P50896	841 aa	Known RBP	4.91	□□□□□ -1.62
CIR1	YGR207C	SNU56	Q03782	492 aa	Known RBP	4.91	□□□□□ -1.62
CIR1	YGR207C	THI3	Q07471	609 aa		4.91	□□□□□ -1.62
CIR1	YGR207C	MRP2	P10663	115 aa	Predicted RBP	4.9	□□□□□ -1.63
CIR1	YGR207C	RFA2	P26754	273 aa	Known RBP	4.9	□□□□□ -1.63
CIR1	YGR207C	SOF1	P33750	489 aa	Known RBP	4.9	□□□□□ -1.63
CIR1	YGR207C	KTR3	P38130	404 aa	Predicted RBP	4.9	□□□□□ -1.63
CIR1	YGR207C	IRC7	P43623	340 aa		4.9	□□□□□ -1.63
CIR1	YGR207C	SAE2	P46946	345 aa		4.9	□□□□□ -1.63
CIR1	YGR207C	ORC5	P50874	479 aa		4.9	□□□□□ -1.63
CIR1	YGR207C	CBK1	P53894	756 aa		4.9	□□□□□ -1.63
CIR1	YGR207C	RIM13	Q03792	727 aa		4.9	□□□□□ -1.63
CIR1	YGR207C	STP3	Q05937	343 aa		4.9	□□□□□ -1.63
CIR1	YGR207C	YLR049C	Q12110	428 aa		4.9	□□□□□ -1.63
CIR1	YGR207C	NKP1	Q12493	238 aa		4.9	□□□□□ -1.63
CIR1	YGR207C	CET1	O13297	549 aa	Predicted RBP	4.89	□□□□□ -1.63
CIR1	YGR207C	APN1	P22936	367 aa		4.89	□□□□□ -1.63
CIR1	YGR207C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	RIP-Chip
CIR1	YGR207C	PHM8	P40025	321 aa		4.89	□□□□□ -1.63
CIR1	YGR207C	LTP1	P40347	161 aa		4.89	□□□□□ -1.63
CIR1	YGR207C	REG1	Q00816	1014 aa		4.89	□□□□□ -1.63
CIR1	YGR207C	LYS21	Q12122	440 aa	Known RBP	4.89	□□□□□ -1.63
CIR1	YGR207C	SKM1	Q12469	655 aa		4.89	□□□□□ -1.63
CIR1	YGR207C	PTP1	P25044	335 aa		4.88	□□□□□ -1.63
CIR1	YGR207C	GFD2	P25370	566 aa	Known RBP	4.88	□□□□□ -1.63
CIR1	YGR207C	CHS3	P29465	1165 aa		4.88	□□□□□ -1.63
CIR1	YGR207C	MSY1	P48527	492 aa		4.88	□□□□□ -1.63
CIR1	YGR207C	VPS4	P52917	437 aa		4.88	□□□□□ -1.63
CIR1	YGR207C	BSC5	P53755	489 aa		4.88	□□□□□ -1.63
CIR1	YGR207C	CRN1	Q06440	651 aa		4.88	□□□□□ -1.63
CIR1	YGR207C	TRM8	Q12009	286 aa		4.88	□□□□□ -1.63
CIR1	YGR207C	PRS5	Q12265	496 aa	Known RBP	4.88	□□□□□ -1.63
CIR1	YGR207C	GUK1	P15454	187 aa	Known RBP	4.87	□□□□□ -1.63
CIR1	YGR207C	BUD16	P39988	312 aa		4.87	□□□□□ -1.63
CIR1	YGR207C	TMA108	P40462	946 aa		4.87	□□□□□ -1.63
CIR1	YGR207C	ADE16	P54113	591 aa	Known RBP	4.87	□□□□□ -1.63
CIR1	YGR207C	RCO1	Q04779	684 aa		4.87	□□□□□ -1.63
CIR1	YGR207C	THI7	Q05998	598 aa		4.87	□□□□□ -1.63
CIR1	YGR207C	YDL121C	Q07541	149 aa		4.87	□□□□□ -1.63
CIR1	YGR207C	HXK2	P04807	486 aa	Known RBP	4.86	□□□□□ -1.63
CIR1	YGR207C	YML003W	P0CF16	290 aa		4.86	□□□□□ -1.63
CIR1	YGR207C	SRB5	P32585	307 aa		4.86	□□□□□ -1.63
CIR1	YGR207C	VID27	P40157	782 aa		4.86	□□□□□ -1.63
CIR1	YGR207C	YJR061W	P40355	935 aa		4.86	□□□□□ -1.63
CIR1	YGR207C	ULP2	P40537	1034 aa	Predicted RBP	4.86	□□□□□ -1.63
CIR1	YGR207C	PSA1	P41940	361 aa	Known RBP	4.86	□□□□□ -1.63
CIR1	YGR207C	NMD5	P46970	1048 aa		4.86	□□□□□ -1.63
CIR1	YGR207C	IDP3	P53982	420 aa	Known RBP	4.86	□□□□□ -1.63
CIR1	YGR207C	VPS72	Q03388	795 aa		4.86	□□□□□ -1.63
CIR1	YGR207C	RAD34	Q06665	692 aa		4.86	□□□□□ -1.63
CIR1	YGR207C	ENT1	Q12518	454 aa		4.86	□□□□□ -1.63
CIR1	YGR207C	YOR111W	Q99210	232 aa		4.86	□□□□□ -1.63
CIR1	YGR207C	FUM1	P08417	488 aa	Known RBP	4.85	□□□□□ -1.63
CIR1	YGR207C	COQ3	P27680	312 aa		4.85	□□□□□ -1.63
CIR1	YGR207C	XBP1	P40489	647 aa		4.85	□□□□□ -1.63
CIR1	YGR207C	UBP8	P50102	471 aa		4.85	□□□□□ -1.63
CIR1	YGR207C	IST1	P53843	298 aa	Predicted RBP	4.85	□□□□□ -1.63
CIR1	YGR207C	PCD1	Q12524	340 aa		4.85	□□□□□ -1.63
CIR1	YGR207C	VCX1	Q99385	411 aa		4.85	□□□□□ -1.63
CIR1	YGR207C	YBR085C-A	O43137	85 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	CDC24	P11433	854 aa	Predicted RBP	4.84	□□□□□ -1.63
CIR1	YGR207C	SPE2	P21182	396 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	ERG8	P24521	451 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	MCM10	P32354	571 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	GSH1	P32477	678 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	AAP1	P37898	856 aa	Known RBP	4.84	□□□□□ -1.63
CIR1	YGR207C	SCO2	P38072	301 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	AXL2	P38928	823 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	YNL144C	P53907	740 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	MUB1	Q03162	620 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	SNO4	Q04902	237 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	HSP33	Q08914	237 aa	Known RBP	4.84	□□□□□ -1.63
CIR1	YGR207C	HSP32	Q08992	237 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	YLR111W	Q12528	110 aa		4.84	□□□□□ -1.63
CIR1	YGR207C	CBF2	P32504	956 aa		4.83	□□□□□ -1.64
CIR1	YGR207C	NTR2	P36118	322 aa	Predicted RBP	4.83	□□□□□ -1.64
CIR1	YGR207C	YBL029W	P38201	376 aa		4.83	□□□□□ -1.64
CIR1	YGR207C	SEC31	P38968	1273 aa	Known RBP	4.83	□□□□□ -1.64
CIR1	YGR207C	ARC1	P46672	376 aa	Known RBP	4.83	□□□□□ -1.64
CIR1	YGR207C	BNA1	P47096	177 aa		4.83	□□□□□ -1.64
CIR1	YGR207C	SKG3	Q06315	1026 aa		4.83	□□□□□ -1.64
CIR1	YGR207C	TFC6	Q06339	672 aa		4.83	□□□□□ -1.64
CIR1	YGR207C	MCH4	Q08268	501 aa		4.83	□□□□□ -1.64
CIR1	YGR207C	TCO89	Q08921	799 aa		4.83	□□□□□ -1.64
CIR1	YGR207C	HUA2	Q12134	243 aa		4.83	□□□□□ -1.64
CIR1	YGR207C	Q0010	Q9ZZX9	128 aa		4.83	□□□□□ -1.64
CIR1	YGR207C	RPB2	P08518	1224 aa	Known RBP	4.82	□□□□□ -1.64
CIR1	YGR207C	MBR1	P23493	339 aa		4.82	□□□□□ -1.64
CIR1	YGR207C	MRP20	P32387	263 aa		4.82	□□□□□ -1.64
CIR1	YGR207C	AGP2	P38090	596 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 52 ms