RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C PET494P07390 489 aaPredicted RBP3.25□□□□□ -1.89
CDH1YGL003C FBP1P09201 348 aa3.25□□□□□ -1.89
CDH1YGL003C PRP6P19735 899 aaPredicted RBP3.25□□□□□ -1.89
CDH1YGL003C PRE10P21242 288 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
CDH1YGL003C DMC1P25453 334 aa3.25□□□□□ -1.89
CDH1YGL003C RME1P32338 300 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C HEM12P32347 362 aaPredicted RBP3.25□□□□□ -1.89
CDH1YGL003C GYP6P32806 458 aa3.25□□□□□ -1.89
CDH1YGL003C XRS2P33301 854 aa3.25□□□□□ -1.89
CDH1YGL003C RMA1P36001 430 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C LHS1P36016 881 aa3.25□□□□□ -1.89
CDH1YGL003C UBP11P36026 717 aa3.25□□□□□ -1.89
CDH1YGL003C MIA40P36046 403 aa3.25□□□□□ -1.89
CDH1YGL003C POA1P38218 177 aa3.25□□□□□ -1.89
CDH1YGL003C YBR138CP38277 524 aa3.25□□□□□ -1.89
CDH1YGL003C RTS1P38903 757 aa3.25□□□□□ -1.89
CDH1YGL003C STN1P38960 494 aa3.25□□□□□ -1.89
CDH1YGL003C UBP7P40453 1071 aa3.25□□□□□ -1.89
CDH1YGL003C YIL108WP40483 696 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C YIR042CP40586 236 aa3.25□□□□□ -1.89
CDH1YGL003C ARF3P40994 183 aaRIP-Chip data3.25□□□□□ -1.89not detected
CDH1YGL003C GZF3P42944 551 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C LOC1P43586 204 aaPredicted RBP3.25□□□□□ -1.89
CDH1YGL003C LSB3P43603 459 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C RMD8P43620 662 aa3.25□□□□□ -1.89
CDH1YGL003C MNN11P46985 422 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C ILM1P47155 203 aa3.25□□□□□ -1.89
CDH1YGL003C YNR061CP53747 219 aa3.25□□□□□ -1.89
CDH1YGL003C CNM67P53865 581 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C ERB1Q04660 807 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C NKP2Q06162 153 aa3.25□□□□□ -1.89
CDH1YGL003C KEL3Q08979 651 aaPredicted RBP3.25□□□□□ -1.89
CDH1YGL003C YPL277CQ08989 487 aa3.25□□□□□ -1.89
CDH1YGL003C CHS5Q12114 671 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C ATG9Q12142 997 aa3.25□□□□□ -1.89
CDH1YGL003C RIO1Q12196 484 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C YOR022CQ12204 715 aa3.25□□□□□ -1.89
CDH1YGL003C PDH1Q12428 516 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C AHC1Q12433 566 aa3.25□□□□□ -1.89
CDH1YGL003C RMP1Q12530 201 aa3.25□□□□□ -1.89
CDH1YGL003C PGA3Q12746 312 aaKnown RBP3.25□□□□□ -1.89
CDH1YGL003C SPO14P36126 1683 aa3.25□□□□□ -1.89
CDH1YGL003C SWI1P09547 1314 aa3.25□□□□□ -1.89
CDH1YGL003C YRF1-4O13559 1382 aa3.25□□□□□ -1.89
CDH1YGL003C YLR358CO13565 187 aa3.24□□□□□ -1.89
CDH1YGL003C PMR1P13586 950 aa3.24□□□□□ -1.89
CDH1YGL003C GFA1P14742 717 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C MSS116P15424 664 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C CKA1P15790 372 aa3.24□□□□□ -1.89
CDH1YGL003C PRP16P15938 1071 aaPredicted RBP3.24□□□□□ -1.89
CDH1YGL003C SEN2P16658 377 aa3.24□□□□□ -1.89
CDH1YGL003C THR1P17423 357 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C PMA2P19657 947 aa3.24□□□□□ -1.89
CDH1YGL003C DBP3P20447 523 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C MIH1P23748 554 aa3.24□□□□□ -1.89
CDH1YGL003C CDC10P25342 322 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C POT1P27796 417 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
CDH1YGL003C RPC19P28000 142 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C CCR4P31384 837 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C ERG3P32353 365 aa3.24□□□□□ -1.89
CDH1YGL003C RPD3P32561 433 aa3.24□□□□□ -1.89
CDH1YGL003C DOA4P32571 926 aa3.24□□□□□ -1.89
CDH1YGL003C RPT3P33298 428 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C BUD2P33314 1104 aa3.24□□□□□ -1.89
CDH1YGL003C YKR018CP36114 725 aa3.24□□□□□ -1.89
CDH1YGL003C STV1P37296 890 aa3.24□□□□□ -1.89
CDH1YGL003C PCH2P38126 564 aa3.24□□□□□ -1.89
CDH1YGL003C MSG5P38590 489 aa3.24□□□□□ -1.89
CDH1YGL003C CTF8P38877 133 aa3.24□□□□□ -1.89
CDH1YGL003C RTR1P40084 226 aaPredicted RBP3.24□□□□□ -1.89
CDH1YGL003C IMA5P40884 581 aa3.24□□□□□ -1.89
CDH1YGL003C TEL2P53038 688 aa3.24□□□□□ -1.89
CDH1YGL003C YGR054WP53235 642 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C YGR250CP53316 781 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C YNR068CP53754 272 aa3.24□□□□□ -1.89
CDH1YGL003C DUS1P53759 423 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C ASI1P54074 624 aa3.24□□□□□ -1.89
CDH1YGL003C YPL107WQ02873 248 aa3.24□□□□□ -1.89
CDH1YGL003C RSM28Q03430 361 aa3.24□□□□□ -1.89
CDH1YGL003C YMR155WQ03795 547 aa3.24□□□□□ -1.89
CDH1YGL003C YDR131CQ03899 556 aa3.24□□□□□ -1.89
CDH1YGL003C SSL1Q04673 461 aaPredicted RBP3.24□□□□□ -1.89
CDH1YGL003C CIA1Q05583 330 aa3.24□□□□□ -1.89
CDH1YGL003C KAP95Q06142 861 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C MMR1Q06324 491 aa3.24□□□□□ -1.89
CDH1YGL003C TPO1Q07824 586 aa3.24□□□□□ -1.89
CDH1YGL003C YDL177CQ12257 170 aa3.24□□□□□ -1.89
CDH1YGL003C FRE6Q12473 712 aa3.24□□□□□ -1.89
CDH1YGL003C KRE5P22023 1365 aa3.24□□□□□ -1.89
CDH1YGL003C BNR1P40450 1375 aa3.24□□□□□ -1.89
CDH1YGL003C VTH1P40438 1549 aa3.24□□□□□ -1.89
CDH1YGL003C VTH2P40890 1549 aa3.24□□□□□ -1.89
CDH1YGL003C CET1O13297 549 aaPredicted RBP3.24□□□□□ -1.89
CDH1YGL003C SUI3P09064 285 aaKnown RBP3.24□□□□□ -1.89
CDH1YGL003C GCD2P12754 651 aaPredicted RBP3.24□□□□□ -1.89
CDH1YGL003C SEC15P22224 910 aa3.24□□□□□ -1.89
CDH1YGL003C STE50P25344 346 aa3.24□□□□□ -1.89
CDH1YGL003C PRD1P25375 712 aa3.24□□□□□ -1.89
CDH1YGL003C SPS22P25380 463 aa3.24□□□□□ -1.89
CDH1YGL003C GPI10P30777 616 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms