RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	LRE1	P25579	583 aa	Known RBP	5.94	□□□□□ -1.46
SNF11	YDR073W	VID24	P38263	362 aa		5.94	□□□□□ -1.46
SNF11	YDR073W	MET28	P40573	187 aa		5.94	□□□□□ -1.46
SNF11	YDR073W	ZIM17	P42844	174 aa		5.94	□□□□□ -1.46
SNF11	YDR073W	MPS3	P47069	682 aa		5.94	□□□□□ -1.46
SNF11	YDR073W	OAZ1	Q02803	292 aa		5.94	□□□□□ -1.46
SNF11	YDR073W	DUS4	Q06063	367 aa		5.94	□□□□□ -1.46
SNF11	YDR073W	YEH1	Q07804	573 aa		5.94	□□□□□ -1.46
SNF11	YDR073W	FRE5	Q08908	694 aa		5.94	□□□□□ -1.46
SNF11	YDR073W	YDL177C	Q12257	170 aa		5.94	□□□□□ -1.46
SNF11	YDR073W	SOD2	P00447	233 aa		5.93	□□□□□ -1.46
SNF11	YDR073W	TRX1	P22217	103 aa	Known RBP	5.93	□□□□□ -1.46
SNF11	YDR073W	PAP1	P29468	568 aa	Known RBP	5.93	□□□□□ -1.46
SNF11	YDR073W	SRB5	P32585	307 aa		5.93	□□□□□ -1.46
SNF11	YDR073W	AGP2	P38090	596 aa		5.93	□□□□□ -1.46
SNF11	YDR073W	GCN5	Q03330	439 aa		5.93	□□□□□ -1.46
SNF11	YDR073W	BUD22	Q04347	519 aa	Known RBP	5.93	□□□□□ -1.46
SNF11	YDR073W	GTB1	Q04924	702 aa		5.93	□□□□□ -1.46
SNF11	YDR073W	RGC1	Q06108	1083 aa	Known RBP	5.93	□□□□□ -1.46
SNF11	YDR073W	YPL191C	Q08930	360 aa		5.93	□□□□□ -1.46
SNF11	YDR073W	MET3	P08536	511 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.92	□□□□□ -1.46	not detected
SNF11	YDR073W	YCR051W	P25631	222 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	SDH8	P38345	138 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	OTU2	P38747	307 aa	Known RBP	5.92	□□□□□ -1.46
SNF11	YDR073W	BUD16	P39988	312 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	MEP1	P40260	492 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.92	□□□□□ -1.46	not detected
SNF11	YDR073W	DLT1	Q04216	342 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	YLR224W	Q05947	369 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	IZH3	Q07959	543 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	CUE5	Q08412	411 aa	Known RBP	5.92	□□□□□ -1.46
SNF11	YDR073W	BUD7	Q08754	746 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	SPE4	Q12455	300 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	YBR255C-A	Q3E776	120 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	YER175W-A	Q8TGU4	54 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	YPT6	Q99260	215 aa		5.92	□□□□□ -1.46
SNF11	YDR073W	CET1	O13297	549 aa	Predicted RBP	5.91	□□□□□ -1.46
SNF11	YDR073W	CAF20	P12962	161 aa	Known RBP	5.91	□□□□□ -1.46
SNF11	YDR073W	APE1	P14904	514 aa		5.91	□□□□□ -1.46
SNF11	YDR073W	VMA2	P16140	517 aa	Known RBP	5.91	□□□□□ -1.46
SNF11	YDR073W	YIH1	P25637	258 aa		5.91	□□□□□ -1.46
SNF11	YDR073W	CDC20	P26309	610 aa		5.91	□□□□□ -1.46
SNF11	YDR073W	MGM1	P32266	881 aa		5.91	□□□□□ -1.46
SNF11	YDR073W	PUP2	P32379	260 aa		5.91	□□□□□ -1.46
SNF11	YDR073W	MSS1	P32559	526 aa	Predicted RBP	5.91	□□□□□ -1.46
SNF11	YDR073W	MRPL7	P36519	292 aa		5.91	□□□□□ -1.46
SNF11	YDR073W	REV7	P38927	245 aa		5.91	□□□□□ -1.46
SNF11	YDR073W	SEC24	P40482	926 aa	Known RBP	5.91	□□□□□ -1.46
SNF11	YDR073W	THI6	P41835	540 aa		5.91	□□□□□ -1.46
SNF11	YDR073W	SAE2	P46946	345 aa		5.91	□□□□□ -1.46
SNF11	YDR073W	MUP1	P50276	574 aa		5.91	□□□□□ -1.46
SNF11	YDR073W	BNI5	P53890	448 aa	Known RBP	5.91	□□□□□ -1.46
SNF11	YDR073W	PRP3	Q03338	469 aa	Predicted RBP	5.91	□□□□□ -1.46
SNF11	YDR073W	EFR3	Q03653	782 aa	Known RBP	5.91	□□□□□ -1.46
SNF11	YDR073W	YDR239C	Q03780	787 aa		5.91	□□□□□ -1.46
SNF11	YDR073W	TRP3	P00937	484 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	YML003W	P0CF16	290 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	GEX2	P36173	615 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	POL12	P38121	705 aa	Predicted RBP	5.9	□□□□□ -1.46
SNF11	YDR073W	CTP1	P38152	299 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	LYS4	P49367	693 aa	Predicted RBP	5.9	□□□□□ -1.46
SNF11	YDR073W	OCA1	P50946	238 aa	Predicted RBP	5.9	□□□□□ -1.46
SNF11	YDR073W	VID30	P53076	958 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	HOS2	P53096	452 aa	Predicted RBP	5.9	□□□□□ -1.46
SNF11	YDR073W	YGL036W	P53185	909 aa	Predicted RBP	5.9	□□□□□ -1.46
SNF11	YDR073W	YGR079W	P53249	370 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.9	□□□□□ -1.46	RIP-Chip
SNF11	YDR073W	SEC5	P89102	971 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	CTF4	Q01454	927 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	PRP42	Q03776	544 aa	Known RBP	5.9	□□□□□ -1.46
SNF11	YDR073W	VPS38	Q05919	439 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	MED7	Q08278	222 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	ATG29	Q12092	213 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	NFI1	Q12216	726 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	HSP42	Q12329	375 aa		5.9	□□□□□ -1.46
SNF11	YDR073W	VMA16	P23968	213 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	RRP7	P25368	297 aa	Predicted RBP	5.89	□□□□□ -1.47
SNF11	YDR073W	TFB1	P32776	642 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	ELF1	P36053	145 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	CST26	P38226	397 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	ERC1	P38767	581 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	FUN12	P39730	1002 aa	Known RBP	5.89	□□□□□ -1.47
SNF11	YDR073W	SPT20	P50875	604 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	PAN2	P53010	1115 aa	Predicted RBP	5.89	□□□□□ -1.47
SNF11	YDR073W	STR3	P53101	465 aa	Known RBP	5.89	□□□□□ -1.47
SNF11	YDR073W	IMO32	P53219	342 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	EOS1	P53938	366 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	MFM1	Q02783	413 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	ENB1	Q08299	606 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	FRE6	Q12473	712 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	AFI1	Q99222	893 aa		5.89	□□□□□ -1.47
SNF11	YDR073W	RFA2	P26754	273 aa	Known RBP	5.88	□□□□□ -1.47
SNF11	YDR073W	SIP1	P32578	815 aa		5.88	□□□□□ -1.47
SNF11	YDR073W	HIS7	P33734	552 aa	Known RBP	5.88	□□□□□ -1.47
SNF11	YDR073W	YBR053C	P38235	358 aa		5.88	□□□□□ -1.47
SNF11	YDR073W	ARO9	P38840	513 aa	Predicted RBP	5.88	□□□□□ -1.47
SNF11	YDR073W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.88	□□□□□ -1.47	not detected
SNF11	YDR073W	ELO3	P40319	345 aa		5.88	□□□□□ -1.47
SNF11	YDR073W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.88	□□□□□ -1.47	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms