RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	YSA1	Q01976	231 aa		6.27	□□□□□ -1.41
TRP1	YDR007W	TRS23	Q03784	219 aa		6.27	□□□□□ -1.41
TRP1	YDR007W	BMS1	Q08965	1183 aa	Known RBP	6.27	□□□□□ -1.41
TRP1	YDR007W	LSP1	Q12230	341 aa	Known RBP	6.27	□□□□□ -1.41
TRP1	YDR007W	YBR255C-A	Q3E776	120 aa		6.27	□□□□□ -1.41
TRP1	YDR007W	YBR126W-A	Q8TGU7	68 aa		6.27	□□□□□ -1.41
TRP1	YDR007W	PET111	P08468	800 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	YPK1	P12688	680 aa	Known RBP	6.26	□□□□□ -1.41
TRP1	YDR007W	SGF29	P25554	259 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	SWI3	P32591	825 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	PCL5	P38794	229 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	ARO9	P38840	513 aa	Predicted RBP	6.26	□□□□□ -1.41
TRP1	YDR007W	YJL206C	P39529	758 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	BUD16	P39988	312 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	DJP1	P40564	432 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	RPS15	Q01855	142 aa	Known RBP	6.26	□□□□□ -1.41
TRP1	YDR007W	FCP1	Q03254	732 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	VPS60	Q03390	229 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	YLR287C	Q05881	355 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	ATG23	Q06671	453 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	ENT4	Q07872	247 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	RLP24	Q07915	199 aa	Known RBP	6.26	□□□□□ -1.41
TRP1	YDR007W	VCX1	Q99385	411 aa		6.26	□□□□□ -1.41
TRP1	YDR007W	LAM4	P38800	1345 aa		6.25	□□□□□ -1.41
TRP1	YDR007W	GEA1	P47102	1408 aa	Predicted RBP	6.25	□□□□□ -1.41
TRP1	YDR007W	SEC53	P07283	254 aa	Known RBP	6.25	□□□□□ -1.41
TRP1	YDR007W	STE4	P18851	423 aa		6.25	□□□□□ -1.41
TRP1	YDR007W	OLE1	P21147	510 aa	Known RBP	6.25	□□□□□ -1.41
TRP1	YDR007W	YBL029W	P38201	376 aa		6.25	□□□□□ -1.41
TRP1	YDR007W	FMP10	P40098	244 aa		6.25	□□□□□ -1.41
TRP1	YDR007W	NDC80	P40460	691 aa		6.25	□□□□□ -1.41
TRP1	YDR007W	IRC6	P43615	237 aa		6.25	□□□□□ -1.41
TRP1	YDR007W	NGL2	Q03264	515 aa	Known RBP	6.25	□□□□□ -1.41
TRP1	YDR007W	MFB1	Q04922	465 aa		6.25	□□□□□ -1.41
TRP1	YDR007W	GTB1	Q04924	702 aa		6.25	□□□□□ -1.41
TRP1	YDR007W	HSH49	Q99181	213 aa	Predicted RBP	6.25	□□□□□ -1.41
TRP1	YDR007W	TY2B-B	Q12491	1770 aa		6.25	□□□□□ -1.41
TRP1	YDR007W	TRM3	Q07527	1436 aa		6.25	□□□□□ -1.41
TRP1	YDR007W	RAD9	P14737	1309 aa		6.25	□□□□□ -1.41
TRP1	YDR007W	NUP159	P40477	1460 aa		6.24	□□□□□ -1.41
TRP1	YDR007W	PMI40	P29952	429 aa	Known RBP	6.24	□□□□□ -1.41
TRP1	YDR007W	ALY1	P36117	915 aa		6.24	□□□□□ -1.41
TRP1	YDR007W	GMH1	P36125	273 aa		6.24	□□□□□ -1.41
TRP1	YDR007W	KTR3	P38130	404 aa	Predicted RBP	6.24	□□□□□ -1.41
TRP1	YDR007W	PIH1	P38768	344 aa		6.24	□□□□□ -1.41
TRP1	YDR007W	UBP7	P40453	1071 aa		6.24	□□□□□ -1.41
TRP1	YDR007W	IMO32	P53219	342 aa		6.24	□□□□□ -1.41
TRP1	YDR007W	ARE2	P53629	642 aa	Known RBP	6.24	□□□□□ -1.41
TRP1	YDR007W	SMX3	P54999	86 aa	Predicted RBP	6.24	□□□□□ -1.41
TRP1	YDR007W	RAD30	Q04049	632 aa		6.24	□□□□□ -1.41
TRP1	YDR007W	YDL073W	Q07454	984 aa		6.24	□□□□□ -1.41
TRP1	YDR007W	PSK2	Q08217	1101 aa		6.24	□□□□□ -1.41
TRP1	YDR007W	ETT1	Q08421	412 aa	Known RBP	6.24	□□□□□ -1.41
TRP1	YDR007W	SCM3	Q12334	223 aa		6.24	□□□□□ -1.41
TRP1	YDR007W	SNQ2	P32568	1501 aa	Known RBP	6.24	□□□□□ -1.41
TRP1	YDR007W	GCN4	P03069	281 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	SUI3	P09064	285 aa	Known RBP	6.23	□□□□□ -1.41
TRP1	YDR007W	YML003W	P0CF16	290 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	FUR1	P18562	216 aa	Known RBP	6.23	□□□□□ -1.41
TRP1	YDR007W	CLB1	P24868	471 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	LRE1	P25579	583 aa	Known RBP	6.23	□□□□□ -1.41
TRP1	YDR007W	TFC3	P34111	1160 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	GLG1	P36143	616 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	GEX2	P36173	615 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	CIN4	P39110	191 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	ARF3	P40994	183 aa	RIP-Chip data	6.23	□□□□□ -1.41	not detected
TRP1	YDR007W	AAD10	P47182	288 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	SPC98	P53540	846 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	MDG1	P53885	366 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	MUB1	Q03162	620 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	TAF11	Q04226	346 aa		6.23	□□□□□ -1.41
TRP1	YDR007W	TY1B-H	O13535	1793 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-DR5	P0C2I2	1755 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-DR6	P0C2I3	1755 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-LR2	P0C2I5	1755 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-PR2	P0C2J0	1756 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-JR1	P47098	1755 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-ML2	Q03434	1755 aa	Known RBP	6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-ER1	Q03612	1755 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-ML1	Q04711	1755 aa	Known RBP	6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-GR2	Q12269	1755 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-OL	Q12273	1755 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	TY1B-PL	Q12414	1755 aa	Known RBP	6.22	□□□□□ -1.41
TRP1	YDR007W	AAC1	P04710	309 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	YCK1	P23291	538 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	DEP1	P31385	405 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	SIP1	P32578	815 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	YPT10	P38146	199 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	YHL017W	P38745	532 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	NPR2	P39923	615 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	SLZ1	P40167	298 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	PMT6	P42934	759 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	YGR079W	P53249	370 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	RPT6	Q01939	405 aa	Known RBP	6.22	□□□□□ -1.41
TRP1	YDR007W	SYF1	Q04048	859 aa	Predicted RBP	6.22	□□□□□ -1.41
TRP1	YDR007W	ARP9	Q05123	467 aa		6.22	□□□□□ -1.41
TRP1	YDR007W	LYS21	Q12122	440 aa	Known RBP	6.22	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms