RNA–Protein interactions for RNA: YDR002W

YRB1, Transcript of Ran GTPase binding protein, yeast

Gene YRB1, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRB1	YDR002W	BMH2	P34730	273 aa	Known RBP	2.45	□□□□□ -2.02
YRB1	YDR002W	YUH1	P35127	236 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	SET3	P36124	751 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	BET3	P36149	193 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	YSW1	P38280	609 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	RTS1	P38903	757 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	YHB1	P39676	399 aa	Known RBP	2.45	□□□□□ -2.02
YRB1	YDR002W	YEL068C	P39977	110 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	EMP65	P40085	556 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	ARG2	P40360	574 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	VHR1	P40522	640 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	PKP1	P40530	394 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	INA22	P40576	216 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	ARF3	P40994	183 aa	RIP-Chip data	2.45	□□□□□ -2.02	not detected
YRB1	YDR002W	QRI7	P43122	407 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	ALR2	P43553	858 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	UBC9	P50623	157 aa	Predicted RBP	2.45	□□□□□ -2.02
YRB1	YDR002W	UBC11	P52492	156 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	MAL11	P53048	616 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	UTP8	P53276	713 aa	Known RBP	2.45	□□□□□ -2.02
YRB1	YDR002W	YGR266W	P53326	701 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	EOS1	P53938	366 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	DAK1	P54838	584 aa	Known RBP	2.45	□□□□□ -2.02
YRB1	YDR002W	TIM10	P87108	93 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	MGR3	Q04472	501 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	ASM4	Q05166	528 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	UTP21	Q06078	939 aa	Predicted RBP	2.45	□□□□□ -2.02
YRB1	YDR002W	CRN1	Q06440	651 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	YTM1	Q12024	460 aa	Predicted RBP	2.45	□□□□□ -2.02
YRB1	YDR002W	RTC5	Q12108	567 aa	Known RBP	2.45	□□□□□ -2.02
YRB1	YDR002W	MDY2	Q12285	212 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	MDM12	Q92328	271 aa		2.45	□□□□□ -2.02
YRB1	YDR002W	DNF3	Q12674	1656 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	GEA1	P47102	1408 aa	Predicted RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	CKA1	P15790	372 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	THR1	P17423	357 aa	Known RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	CBP3	P21560	335 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	PRE8	P23639	250 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	ITR1	P30605	584 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	GPI10	P30777	616 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	RME1	P32338	300 aa	Known RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	MEI5	P32489	222 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	NGG1	P32494	702 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	CBF2	P32504	956 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	DOA4	P32571	926 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	YKU70	P32807	602 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	RPT3	P33298	428 aa	Known RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	XRS2	P33301	854 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	SLC1	P33333	303 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	MCD4	P36051	919 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	DID4	P36108	232 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	TAF5	P38129	798 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	PEX32	P38292	413 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	TSL1	P38427	1098 aa	Known RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	PPE1	P38796	400 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	UTP9	P38882	575 aa	Known RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	LSM5	P40089	93 aa	Known RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	LCB2	P40970	561 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	PFD1	P46988	109 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	MLC1	P53141	149 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	RPN14	P53196	417 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	OGG1	P53397	376 aa	Predicted RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	YNR061C	P53747	219 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	CNM67	P53865	581 aa	Known RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	YML119W	Q03208	357 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	YMR155W	Q03795	547 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	RRP17	Q04031	235 aa	Predicted RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	RBA50	Q04418	439 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	ATG26	Q06321	1198 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	ARR1	Q06596	294 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	ARR2	Q06597	130 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.44	□□□□□ -2.02	not detected
YRB1	YDR002W	KEL3	Q08979	651 aa	Predicted RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	PDH1	Q12428	516 aa	Known RBP	2.44	□□□□□ -2.02
YRB1	YDR002W	FRE6	Q12473	712 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	YOR019W	Q99248	730 aa		2.44	□□□□□ -2.02
YRB1	YDR002W	CET1	O13297	549 aa	Predicted RBP	2.43	□□□□□ -2.02
YRB1	YDR002W	SRD1	P09007	221 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	BIK1	P11709	440 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	SEC18	P18759	758 aa	Known RBP	2.43	□□□□□ -2.02
YRB1	YDR002W	PWP1	P21304	576 aa	Known RBP	2.43	□□□□□ -2.02
YRB1	YDR002W	STE50	P25344	346 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	NPP1	P25353	742 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	PRD1	P25375	712 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	VBA3	P25594	458 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	YJU2	P28320	278 aa	Predicted RBP	2.43	□□□□□ -2.02
YRB1	YDR002W	HMX1	P32339	317 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	HEM12	P32347	362 aa	Predicted RBP	2.43	□□□□□ -2.02
YRB1	YDR002W	ERG3	P32353	365 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	SRB4	P32569	687 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	GYP6	P32806	458 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	YEL1	P34225	687 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	UBP11	P36026	717 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	LAS1	P36146	502 aa	Predicted RBP	2.43	□□□□□ -2.02
YRB1	YDR002W	PXL1	P36166	706 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	VBA5	P36172	582 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	MRPL40	P36534	297 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	STV1	P37296	890 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	YBR138C	P38277	524 aa		2.43	□□□□□ -2.02
YRB1	YDR002W	BIT2	P38346	545 aa		2.43	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms