RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	TMA16	Q08687	178 aa		6.32	□□□□□ -1.4
SIR2	YDL042C	AI5_ALPHA	Q9ZZX1	630 aa		6.32	□□□□□ -1.4
SIR2	YDL042C	TY1B-BR	Q12193	1756 aa		6.32	□□□□□ -1.4
SIR2	YDL042C	TY1B-GR3	Q12316	1755 aa		6.32	□□□□□ -1.4
SIR2	YDL042C	TY1B-OR	Q92393	1755 aa		6.32	□□□□□ -1.4
SIR2	YDL042C	UBX6	P47049	396 aa		6.31	□□□□□ -1.4
SIR2	YDL042C	DNF1	P32660	1571 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	YLR302C	O13544	120 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	CHS3	P29465	1165 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	VBA2	P38358	474 aa	Known RBP	6.3	□□□□□ -1.4
SIR2	YDL042C	YJL043W	P47053	257 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	SNO4	Q04902	237 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	ARO10	Q06408	635 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	HSP33	Q08914	237 aa	Known RBP	6.3	□□□□□ -1.4
SIR2	YDL042C	HSP32	Q08992	237 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	AQY1	P0CD91	305 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	YML003W	P0CF16	290 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	ILV6	P25605	309 aa	Known RBP	6.3	□□□□□ -1.4
SIR2	YDL042C	CBF2	P32504	956 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	HES1	P35843	434 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	DJP1	P40564	432 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	CYK3	Q07533	885 aa		6.3	□□□□□ -1.4
SIR2	YDL042C	SES1	P07284	462 aa	Known RBP	6.29	□□□□□ -1.4
SIR2	YDL042C	RFA2	P26754	273 aa	Known RBP	6.29	□□□□□ -1.4
SIR2	YDL042C	LAC1	P28496	418 aa		6.29	□□□□□ -1.4
SIR2	YDL042C	GEX2	P36173	615 aa		6.29	□□□□□ -1.4
SIR2	YDL042C	RIX1	P38883	763 aa	Predicted RBP	6.29	□□□□□ -1.4
SIR2	YDL042C	CIR1	P42940	261 aa		6.29	□□□□□ -1.4
SIR2	YDL042C	YDR109C	Q04585	715 aa		6.29	□□□□□ -1.4
SIR2	YDL042C	ERG27	Q12452	347 aa	Known RBP	6.29	□□□□□ -1.4
SIR2	YDL042C	GFD2	P25370	566 aa	Known RBP	6.28	□□□□□ -1.4
SIR2	YDL042C	KES1	P35844	434 aa	Known RBP	6.28	□□□□□ -1.4
SIR2	YDL042C	MNT3	P40549	630 aa		6.28	□□□□□ -1.4
SIR2	YDL042C	REG1	Q00816	1014 aa		6.28	□□□□□ -1.4
SIR2	YDL042C	RKR1	Q04781	1562 aa		6.28	□□□□□ -1.4
SIR2	YDL042C	TY2B-B	Q12491	1770 aa		6.28	□□□□□ -1.4
SIR2	YDL042C	TY1B-DR3	Q99231	1755 aa		6.28	□□□□□ -1.4
SIR2	YDL042C	BNR1	P40450	1375 aa		6.27	□□□□□ -1.4
SIR2	YDL042C	TUB1	P09733	447 aa	Known RBP	6.27	□□□□□ -1.41
SIR2	YDL042C	DPH1	P40487	425 aa	Known RBP	6.27	□□□□□ -1.41
SIR2	YDL042C	YNL058C	P53947	316 aa		6.27	□□□□□ -1.41
SIR2	YDL042C	YAT1	P80235	687 aa		6.27	□□□□□ -1.41
SIR2	YDL042C	TMA64	Q04600	565 aa	Known RBP	6.27	□□□□□ -1.41
SIR2	YDL042C	YDR056C	Q12025	205 aa		6.27	□□□□□ -1.41
SIR2	YDL042C	BAG7	Q12128	409 aa		6.27	□□□□□ -1.41
SIR2	YDL042C	YOL087C	Q99247	1116 aa		6.27	□□□□□ -1.41
SIR2	YDL042C	PAN1	P32521	1480 aa		6.27	□□□□□ -1.41
SIR2	YDL042C	PFK26	P40433	827 aa	Known RBP	6.26	□□□□□ -1.41
SIR2	YDL042C	MSY1	P48527	492 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	RTC1	Q08281	1341 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-H	O13535	1793 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-DR5	P0C2I2	1755 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-DR6	P0C2I3	1755 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-LR2	P0C2I5	1755 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-PR2	P0C2J0	1756 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-JR1	P47098	1755 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-ML2	Q03434	1755 aa	Known RBP	6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-ER1	Q03612	1755 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-ML1	Q04711	1755 aa	Known RBP	6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-GR2	Q12269	1755 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-OL	Q12273	1755 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	TY1B-PL	Q12414	1755 aa	Known RBP	6.26	□□□□□ -1.41
SIR2	YDL042C	YOR1	P53049	1477 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	BI2	P03873	423 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	FUM1	P08417	488 aa	Known RBP	6.26	□□□□□ -1.41
SIR2	YDL042C	ERG8	P24521	451 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	FLO10	P36170	1169 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	SAE2	P46946	345 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	NBP2	Q12163	236 aa		6.26	□□□□□ -1.41
SIR2	YDL042C	ILV2	P07342	687 aa	Known RBP	6.25	□□□□□ -1.41
SIR2	YDL042C	GSY2	P27472	705 aa		6.25	□□□□□ -1.41
SIR2	YDL042C	PSD1	P39006	500 aa		6.25	□□□□□ -1.41
SIR2	YDL042C	TAX4	P47030	604 aa		6.25	□□□□□ -1.41
SIR2	YDL042C	VPS4	P52917	437 aa		6.25	□□□□□ -1.41
SIR2	YDL042C	VCX1	Q99385	411 aa		6.25	□□□□□ -1.41
SIR2	YDL042C	MET5	P47169	1442 aa		6.25	□□□□□ -1.41
SIR2	YDL042C	SMC4	Q12267	1418 aa		6.25	□□□□□ -1.41
SIR2	YDL042C	STU1	P38198	1513 aa		6.24	□□□□□ -1.41
SIR2	YDL042C	RPB2	P08518	1224 aa	Known RBP	6.24	□□□□□ -1.41
SIR2	YDL042C	PTC6	P25646	442 aa		6.24	□□□□□ -1.41
SIR2	YDL042C	MRP20	P32387	263 aa		6.24	□□□□□ -1.41
SIR2	YDL042C	RCO1	Q04779	684 aa		6.24	□□□□□ -1.41
SIR2	YDL042C	NUS1	Q12063	375 aa		6.24	□□□□□ -1.41
SIR2	YDL042C	YSP3	P25036	478 aa		6.23	□□□□□ -1.41
SIR2	YDL042C	TFC3	P34111	1160 aa		6.23	□□□□□ -1.41
SIR2	YDL042C	MUD2	P36084	527 aa	Known RBP	6.23	□□□□□ -1.41
SIR2	YDL042C	APD1	P38281	316 aa		6.23	□□□□□ -1.41
SIR2	YDL042C	YJR061W	P40355	935 aa		6.23	□□□□□ -1.41
SIR2	YDL042C	TMA108	P40462	946 aa		6.23	□□□□□ -1.41
SIR2	YDL042C	RDL1	Q12305	139 aa	Known RBP	6.23	□□□□□ -1.41
SIR2	YDL042C	MMS22	Q06164	1454 aa		6.23	□□□□□ -1.41
SIR2	YDL042C	RPA190	P10964	1664 aa	Known RBP	6.23	□□□□□ -1.41
SIR2	YDL042C	UBP7	P40453	1071 aa		6.23	□□□□□ -1.41
SIR2	YDL042C	DCP2	P53550	970 aa	Known RBP	6.23	□□□□□ -1.41
SIR2	YDL042C	RAD34	Q06665	692 aa		6.23	□□□□□ -1.41
SIR2	YDL042C	SWA2	Q06677	668 aa		6.23	□□□□□ -1.41
SIR2	YDL042C	YOR389W	Q08912	624 aa		6.23	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms