RNA–Protein interactions for RNA: YCR085W

YCR085W, Transcript of Dubious open reading frame, yeast

Gene YCR085W, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR085W	YCR085W	ORC2	P32833	620 aa		4.26	□□□□□ -1.73
YCR085W	YCR085W	SKG6	P32900	734 aa	Predicted RBP	4.26	□□□□□ -1.73
YCR085W	YCR085W	LEU5	P38702	357 aa		4.26	□□□□□ -1.73
YCR085W	YCR085W	MUP3	P38734	546 aa		4.26	□□□□□ -1.73
YCR085W	YCR085W	ERC1	P38767	581 aa		4.26	□□□□□ -1.73
YCR085W	YCR085W	MAL11	P53048	616 aa		4.26	□□□□□ -1.73
YCR085W	YCR085W	RTT102	P53330	157 aa		4.26	□□□□□ -1.73
YCR085W	YCR085W	REC102	Q02721	264 aa		4.26	□□□□□ -1.73
YCR085W	YCR085W	YPQ1	Q12010	308 aa		4.26	□□□□□ -1.73
YCR085W	YCR085W	RPL4A	P10664	362 aa	Known RBP	4.25	□□□□□ -1.73
YCR085W	YCR085W	VPS34	P22543	875 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	GSY1	P23337	708 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	ERG6	P25087	383 aa	Known RBP	4.25	□□□□□ -1.73
YCR085W	YCR085W	PRR1	P28708	518 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	SWE1	P32944	819 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	SIF2	P38262	535 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	GDH3	P39708	457 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	GET2	P40056	285 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	PCI8	P40512	444 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	VTC2	P43585	828 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	RMD8	P43620	662 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	RPL4B	P49626	362 aa	Known RBP	4.25	□□□□□ -1.73
YCR085W	YCR085W	UBC9	P50623	157 aa	Predicted RBP	4.25	□□□□□ -1.73
YCR085W	YCR085W	CWC21	Q03375	135 aa	Known RBP	4.25	□□□□□ -1.73
YCR085W	YCR085W	HER2	Q03557	464 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	CSM3	Q04659	317 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	ECM7	Q06200	448 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	FPR4	Q06205	392 aa	Predicted RBP	4.25	□□□□□ -1.73
YCR085W	YCR085W	MEC1	P38111	2368 aa		4.25	□□□□□ -1.73
YCR085W	YCR085W	POL2	P21951	2222 aa	Known RBP	4.25	□□□□□ -1.73
YCR085W	YCR085W	GAL80	P04387	435 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	VAS1	P07806	1104 aa	Known RBP	4.24	□□□□□ -1.73
YCR085W	YCR085W	TCP1	P12612	559 aa	Known RBP	4.24	□□□□□ -1.73
YCR085W	YCR085W	PPH22	P23595	377 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	GAC1	P28006	793 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	CCR4	P31384	837 aa	Known RBP	4.24	□□□□□ -1.73
YCR085W	YCR085W	TFB1	P32776	642 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	SEC6	P32844	805 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	CSE1	P33307	960 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	CRP1	P38845	465 aa	Known RBP	4.24	□□□□□ -1.73
YCR085W	YCR085W	CAF16	P43569	289 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	IES1	P43579	692 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	YGL138C	P53122	345 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	CUL3	P53202	744 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	NCS2	P53923	493 aa	Predicted RBP	4.24	□□□□□ -1.73
YCR085W	YCR085W	TRS130	Q03660	1102 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	SEG1	Q04279	960 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	HEL2	Q05580	639 aa	Known RBP	4.24	□□□□□ -1.73
YCR085W	YCR085W	RGC1	Q06108	1083 aa	Known RBP	4.24	□□□□□ -1.73
YCR085W	YCR085W	NKP2	Q06162	153 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	BSP1	Q06604	576 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	YAP7	Q08182	245 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	OSW1	Q08692	278 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	HRT3	Q12347	344 aa		4.24	□□□□□ -1.73
YCR085W	YCR085W	RAD16	P31244	790 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	SFP1	P32432	683 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	COT1	P32798	439 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	YBR056W	P38081	501 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	PPE1	P38796	400 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	DOT6	P40059	670 aa	Known RBP	4.23	□□□□□ -1.73
YCR085W	YCR085W	LTP1	P40347	161 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	FYV8	P46949	817 aa	Known RBP	4.23	□□□□□ -1.73
YCR085W	YCR085W	POL31	P46957	487 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	GLO1	P50107	326 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	CAF130	P53280	1122 aa	Predicted RBP	4.23	□□□□□ -1.73
YCR085W	YCR085W	RET3	P53600	189 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	PGA2	P53903	129 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	SEC5	P89102	971 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	SNP1	Q00916	300 aa	Predicted RBP	4.23	□□□□□ -1.73
YCR085W	YCR085W	SNU56	Q03782	492 aa	Known RBP	4.23	□□□□□ -1.73
YCR085W	YCR085W	SHS1	Q07657	551 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	ZRT2	Q12436	422 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	MDM12	Q92328	271 aa		4.23	□□□□□ -1.73
YCR085W	YCR085W	MTF1	P14908	341 aa	Known RBP	4.22	□□□□□ -1.73
YCR085W	YCR085W	RNR1	P21524	888 aa	Known RBP	4.22	□□□□□ -1.73
YCR085W	YCR085W	VPS3	P23643	1011 aa		4.22	□□□□□ -1.73
YCR085W	YCR085W	MIH1	P23748	554 aa		4.22	□□□□□ -1.73
YCR085W	YCR085W	STO1	P34160	861 aa	Known RBP	4.22	□□□□□ -1.73
YCR085W	YCR085W	GMH1	P36125	273 aa		4.22	□□□□□ -1.73
YCR085W	YCR085W	BTT1	P40314	149 aa	Predicted RBP	4.22	□□□□□ -1.73
YCR085W	YCR085W	DUG1	P43616	481 aa	Known RBP	4.22	□□□□□ -1.73
YCR085W	YCR085W	BNA3	P47039	444 aa	Known RBP	4.22	□□□□□ -1.73
YCR085W	YCR085W	VPS25	P47142	202 aa		4.22	□□□□□ -1.73
YCR085W	YCR085W	CTF3	Q12748	733 aa		4.22	□□□□□ -1.73
YCR085W	YCR085W	TPM1	P17536	199 aa	Known RBP	4.21	□□□□□ -1.74
YCR085W	YCR085W	PRP28	P23394	588 aa		4.21	□□□□□ -1.74
YCR085W	YCR085W	SWI4	P25302	1093 aa	Known RBP	4.21	□□□□□ -1.74
YCR085W	YCR085W	SET3	P36124	751 aa		4.21	□□□□□ -1.74
YCR085W	YCR085W	YKR051W	P36142	418 aa		4.21	□□□□□ -1.74
YCR085W	YCR085W	TIF5	P38431	405 aa	Known RBP	4.21	□□□□□ -1.74
YCR085W	YCR085W	NOP9	P47077	666 aa	Known RBP	4.21	□□□□□ -1.74
YCR085W	YCR085W	ORC5	P50874	479 aa		4.21	□□□□□ -1.74
YCR085W	YCR085W	YGR266W	P53326	701 aa		4.21	□□□□□ -1.74
YCR085W	YCR085W	ARK1	P53974	638 aa		4.21	□□□□□ -1.74
YCR085W	YCR085W	SMA1	Q02651	245 aa		4.21	□□□□□ -1.74
YCR085W	YCR085W	RIM13	Q03792	727 aa		4.21	□□□□□ -1.74
YCR085W	YCR085W	YLH47	Q06493	454 aa		4.21	□□□□□ -1.74
YCR085W	YCR085W	CDD1	Q06549	142 aa		4.21	□□□□□ -1.74
YCR085W	YCR085W	FPR1	P20081	114 aa	Known RBP	4.2	□□□□□ -1.74
YCR085W	YCR085W	SRX1	P36077	127 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 169.1 ms