RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT2	YBR229C	JIP4	Q03361	876 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	ENT5	Q03769	411 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	SEC10	Q06245	871 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	BUD20	Q08004	166 aa	Predicted RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	MET7	Q08645	548 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	NSL1	Q12143	216 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	VPS3	P23643	1011 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	GCD11	P32481	527 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	BUD2	P33314	1104 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	EAP1	P36041	632 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	SRP68	P38687	599 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	UBP7	P40453	1071 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	RPS10B	P46784	105 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	BNA3	P47039	444 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	AIF1	P52923	378 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	IMA1	P53051	589 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	REX2	P54964	269 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	MUK1	Q02866	612 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	HPT1	Q04178	221 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	SYT1	Q06836	1226 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	YDL121C	Q07541	149 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	YEH2	Q07950	538 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	RPS10A	Q08745	105 aa	Predicted RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	SPE1	P08432	466 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	SUI3	P09064	285 aa	Known RBP	4.93	□□□□□ -1.62
ROT2	YBR229C	NMT1	P14743	455 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	CNA1	P23287	553 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	DPB2	P24482	689 aa	Predicted RBP	4.93	□□□□□ -1.62
ROT2	YBR229C	PHO91	P27514	894 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	PAH1	P32567	862 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	CSE1	P33307	960 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	TIF3	P34167	436 aa	Known RBP	4.93	□□□□□ -1.62
ROT2	YBR229C	FUI1	P38196	639 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	AMN1	P38285	549 aa	Predicted RBP	4.93	□□□□□ -1.62
ROT2	YBR229C	UBX7	P38349	436 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	SEO1	P39709	593 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	SPR3	P41901	512 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	YFL040W	P43562	540 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	NCS6	P53088	359 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	GND2	P53319	492 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	YNL011C	P53980	444 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	STP1	Q00947	519 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	CSN9	Q03981	162 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	RAD30	Q04049	632 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	HSP31	Q04432	237 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	HEL2	Q05580	639 aa	Known RBP	4.93	□□□□□ -1.62
ROT2	YBR229C	ESA1	Q08649	445 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	COX6	P00427	148 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	MET16	P18408	261 aa	Predicted RBP	4.93	□□□□□ -1.62
ROT2	YBR229C	YCR090C	P25654	182 aa	Known RBP	4.93	□□□□□ -1.62
ROT2	YBR229C	ASH1	P34233	588 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	KAP104	P38217	918 aa	Known RBP	4.93	□□□□□ -1.62
ROT2	YBR229C	RPS0B	P46654	252 aa	Known RBP	4.93	□□□□□ -1.62
ROT2	YBR229C	DAN4	P47179	1161 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	STB4	P50104	949 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
ROT2	YBR229C	LSM3	P57743	89 aa	Known RBP	4.93	□□□□□ -1.62
ROT2	YBR229C	ARA2	Q04212	335 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	DDC1	Q08949	612 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	NBP2	Q12163	236 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	MSH5	Q12175	901 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	YOR342C	Q12182	319 aa		4.93	□□□□□ -1.62
ROT2	YBR229C	GAL80	P04387	435 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	MSS18	P08593	268 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	SBP1	P10080	294 aa	Known RBP	4.92	□□□□□ -1.62
ROT2	YBR229C	RSA4	P25382	515 aa	Known RBP	4.92	□□□□□ -1.62
ROT2	YBR229C	ADY2	P25613	283 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	PUP2	P32379	260 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	PTC1	P35182	281 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	ASK1	P35734	292 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	DIA3	P52290	468 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	NOP19	P53317	196 aa	Predicted RBP	4.92	□□□□□ -1.62
ROT2	YBR229C	YNL134C	P53912	376 aa	Known RBP	4.92	□□□□□ -1.62
ROT2	YBR229C	SKI8	Q02793	397 aa	Predicted RBP	4.92	□□□□□ -1.62
ROT2	YBR229C	SRL4	Q03085	281 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	GMC2	Q06201	188 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	YLR413W	Q06689	675 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	MUM3	Q08750	479 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	CCP1	P00431	361 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	ERG20	P08524	352 aa	Known RBP	4.92	□□□□□ -1.62
ROT2	YBR229C	HVG1	P0CE11	249 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	SNF4	P12904	322 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	APE1	P14904	514 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	PAT1	P25644	796 aa	Known RBP	4.92	□□□□□ -1.62
ROT2	YBR229C	YBR241C	P38142	488 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	MRP21	P38175	177 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	CYC2	P38909	366 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	YCK3	P39962	524 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	ECM10	P39987	644 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	ELO3	P40319	345 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	COA1	P40452	197 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	VHR1	P40522	640 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	CDC1	P40986	491 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	AGP3	P43548	558 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	GUF1	P46943	645 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	EMC2	P47133	292 aa	Known RBP	4.92	□□□□□ -1.62
ROT2	YBR229C	PEX8	P53248	589 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	SIW14	P53965	281 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	HRD3	Q05787	833 aa		4.92	□□□□□ -1.62
ROT2	YBR229C	GPM2	Q12008	311 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms