RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Krtap12-1Q9Z287 130 aa7.42□□□□□ -1.22
Smarcc1-207ENSMUST00000199896 Csmd3Q80T79 3707 aa7.38□□□□□ -1.23
Smarcc1-207ENSMUST00000199896 Dnah17Q69Z23 4481 aa7.32□□□□□ -1.24
Smarcc1-207ENSMUST00000199896 Hspg2Q05793 3707 aaKnown RBP7.26□□□□□ -1.25
Smarcc1-207ENSMUST00000199896 Sprr2gO70558 76 aa7.19□□□□□ -1.26
Smarcc1-207ENSMUST00000199896 Lce1mQ9CR91 182 aa7.18□□□□□ -1.26
Smarcc1-207ENSMUST00000199896 TnxbO35452 4006 aa7.17□□□□□ -1.26
Smarcc1-207ENSMUST00000199896 Dnah7bL7N1Y0 4068 aa7.14□□□□□ -1.27
Smarcc1-207ENSMUST00000199896 SacsQ9JLC8 4582 aa7.13□□□□□ -1.27
Smarcc1-207ENSMUST00000199896 Dnah6E9Q0B6 4144 aa7.13□□□□□ -1.27
Smarcc1-207ENSMUST00000199896 Dnah3Q8BW94 4083 aa7.1□□□□□ -1.27
Smarcc1-207ENSMUST00000199896 Mycbp2Q7TPH6 4711 aa7.1□□□□□ -1.27
Smarcc1-207ENSMUST00000199896 Kmt2aP55200 3966 aa7.1□□□□□ -1.27
Smarcc1-207ENSMUST00000199896 Ryr1E9PZQ0 5035 aa7.09□□□□□ -1.27
Smarcc1-207ENSMUST00000199896 Dnah11E9Q7N9 4488 aa7.08□□□□□ -1.28
Smarcc1-207ENSMUST00000199896 Dync1h1Q9JHU4 4644 aaKnown RBP7.06□□□□□ -1.28
Smarcc1-207ENSMUST00000199896 ApobE9Q414 4505 aa7.04□□□□□ -1.28
Smarcc1-207ENSMUST00000199896 Dync2h1Q45VK7 4306 aa7.03□□□□□ -1.28
Smarcc1-207ENSMUST00000199896 Dnah9B1AR51 4484 aa6.99□□□□□ -1.29
Smarcc1-207ENSMUST00000199896 Krtap9-5A2A5X3 358 aa6.98□□□□□ -1.29
Smarcc1-207ENSMUST00000199896 Dnah2P0C6F1 4456 aa6.97□□□□□ -1.29
Smarcc1-207ENSMUST00000199896 Fat1A0A1L1SQU7 4645 aa6.95□□□□□ -1.3
Smarcc1-207ENSMUST00000199896 PrkdcP97313 4128 aa6.95□□□□□ -1.3
Smarcc1-207ENSMUST00000199896 Krtap19-3Q925H6 87 aa6.92□□□□□ -1.3
Smarcc1-207ENSMUST00000199896 Krtap16-3Q8C1I6 86 aa6.91□□□□□ -1.3
Smarcc1-207ENSMUST00000199896 Dnah1E9Q8T7 4250 aa6.91□□□□□ -1.3
Smarcc1-207ENSMUST00000199896 Lce3bQ9CQM7 98 aa6.87□□□□□ -1.31
Smarcc1-207ENSMUST00000199896 Lrp1bQ9JI18 4599 aa6.85□□□□□ -1.31
Smarcc1-207ENSMUST00000199896 Prm1P02319 51 aa6.78□□□□□ -1.32
Smarcc1-207ENSMUST00000199896 Lce3cQ91V05 98 aa6.75□□□□□ -1.33
Smarcc1-207ENSMUST00000199896 Krtap19-1Q925H2 87 aa6.73□□□□□ -1.33
Smarcc1-207ENSMUST00000199896 Dnah8Q91XQ0 4731 aa6.72□□□□□ -1.33
Smarcc1-207ENSMUST00000199896 Gm10272F7CZ33 110 aa6.71□□□□□ -1.34
Smarcc1-207ENSMUST00000199896 Pkd1O08852 4293 aa6.66□□□□□ -1.34
Smarcc1-207ENSMUST00000199896 Fat3Q8BNA6 4555 aa6.62□□□□□ -1.35
Smarcc1-207ENSMUST00000199896 Gm10100J3QK64 120 aa6.61□□□□□ -1.35
Smarcc1-207ENSMUST00000199896 Ryr3A2AGL3 4863 aa6.6□□□□□ -1.35
Smarcc1-207ENSMUST00000199896 Fras1Q80T14 4010 aa6.6□□□□□ -1.35
Smarcc1-207ENSMUST00000199896 HydinQ80W93 5154 aa6.6□□□□□ -1.35
Smarcc1-207ENSMUST00000199896 Krtap22-2J3QNX6 67 aa6.6□□□□□ -1.35
Smarcc1-207ENSMUST00000199896 Gm38119A0A0A6YX29 146 aa6.59□□□□□ -1.35
Smarcc1-207ENSMUST00000199896 Mt2P02798 61 aa6.59□□□□□ -1.35
Smarcc1-207ENSMUST00000199896 2310046K23RikA0A0A6YVW6 87 aa6.59□□□□□ -1.35
Smarcc1-207ENSMUST00000199896 Dnhd1D3Z2X2 4750 aa6.57□□□□□ -1.36
Smarcc1-207ENSMUST00000199896 Herc2Q4U2R1 4836 aa6.55□□□□□ -1.36
Smarcc1-207ENSMUST00000199896 Gm7735D3YX18 52 aa6.53□□□□□ -1.36
Smarcc1-207ENSMUST00000199896 Hectd4E9Q2E4 4418 aa6.52□□□□□ -1.37
Smarcc1-207ENSMUST00000199896 Lce3eF8VQJ0 98 aa6.52□□□□□ -1.37
Smarcc1-207ENSMUST00000199896 Lce3fQ6PAI4 98 aa6.52□□□□□ -1.37
Smarcc1-207ENSMUST00000199896 Dnah7cA0A087WR13 4024 aa6.51□□□□□ -1.37
Smarcc1-207ENSMUST00000199896 Kiaa1109A2AAE1 5005 aa6.51□□□□□ -1.37
Smarcc1-207ENSMUST00000199896 Lrp1Q91ZX7 4545 aaKnown RBP6.5□□□□□ -1.37
Smarcc1-207ENSMUST00000199896 Lrp2A2ARV4 4660 aa6.5□□□□□ -1.37
Smarcc1-207ENSMUST00000199896 Dnah7aE9Q0T8 4024 aa6.47□□□□□ -1.37
Smarcc1-207ENSMUST00000199896 Krtap19-2Q925I0 141 aa6.46□□□□□ -1.37
Smarcc1-207ENSMUST00000199896 Lce3dE9Q8V1 98 aa6.44□□□□□ -1.38
Smarcc1-207ENSMUST00000199896 Krtap1-3A2A588 173 aa6.44□□□□□ -1.38
Smarcc1-207ENSMUST00000199896 Sprr2iO70560 76 aa6.43□□□□□ -1.38
Smarcc1-207ENSMUST00000199896 Gm10142J3KMP7 120 aa6.4□□□□□ -1.38
Smarcc1-207ENSMUST00000199896 Ryr2E9Q401 4966 aaKnown RBP6.4□□□□□ -1.38
Smarcc1-207ENSMUST00000199896 Gm9789Q8BIG3 52 aa6.34□□□□□ -1.39
Smarcc1-207ENSMUST00000199896 Lce3aQ497I5 98 aa6.33□□□□□ -1.4
Smarcc1-207ENSMUST00000199896 PcloQ9QYX7 5068 aa6.32□□□□□ -1.4
Smarcc1-207ENSMUST00000199896 Lce1jD3YUU5 139 aa6.31□□□□□ -1.4
Smarcc1-207ENSMUST00000199896 Fat2Q5F226 4351 aa6.3□□□□□ -1.4
Smarcc1-207ENSMUST00000199896 Lce1gQ9D195 139 aa6.29□□□□□ -1.4
Smarcc1-207ENSMUST00000199896 Lce1iQ9D6P5 149 aa6.29□□□□□ -1.4
Smarcc1-207ENSMUST00000199896 Lce1hQ9D6R3 140 aa6.29□□□□□ -1.4
Smarcc1-207ENSMUST00000199896 Gm10061D3Z714 54 aa6.22□□□□□ -1.41
Smarcc1-207ENSMUST00000199896 Vps13bQ80TY5 3993 aa6.21□□□□□ -1.42
Smarcc1-207ENSMUST00000199896 Lce1fB9EJP6 147 aa6.19□□□□□ -1.42
Smarcc1-207ENSMUST00000199896 Lce1cQ9D1C5 147 aa6.19□□□□□ -1.42
Smarcc1-207ENSMUST00000199896 Lce1lQ9D1G7 135 aa6.19□□□□□ -1.42
Smarcc1-207ENSMUST00000199896 Lce1dQ9D731 133 aa6.19□□□□□ -1.42
Smarcc1-207ENSMUST00000199896 Lce1bQ9D149 137 aa6.18□□□□□ -1.42
Smarcc1-207ENSMUST00000199896 Gm11569B1AQB1 180 aa6.18□□□□□ -1.42
Smarcc1-207ENSMUST00000199896 Kmt2cQ8BRH4 4903 aa6.18□□□□□ -1.42
Smarcc1-207ENSMUST00000199896 Mdn1A2ANY6 5589 aaKnown RBP6.07□□□□□ -1.44
Smarcc1-207ENSMUST00000199896 Herc1E9PZP8 4859 aa6.06□□□□□ -1.44
Smarcc1-207ENSMUST00000199896 Sprr2fO70557 76 aa6.04□□□□□ -1.44
Smarcc1-207ENSMUST00000199896 Sprr2eO70556 76 aa6.04□□□□□ -1.44
Smarcc1-207ENSMUST00000199896 Lce1eQ9D139 143 aa6.04□□□□□ -1.44
Smarcc1-207ENSMUST00000199896 Pkhd1E9PZ36 4059 aa6.01□□□□□ -1.45
Smarcc1-207ENSMUST00000199896 Gm10024A0A0A0MQA4 119 aa5.98□□□□□ -1.45
Smarcc1-207ENSMUST00000199896 Mt4P47945 62 aa5.98□□□□□ -1.45
Smarcc1-207ENSMUST00000199896 Birc6O88738 4882 aa5.97□□□□□ -1.45
Smarcc1-207ENSMUST00000199896 Krtap4-2B1AQ85 167 aa5.94□□□□□ -1.46
Smarcc1-207ENSMUST00000199896 Pkhd1l1Q80ZA4 4249 aa5.92□□□□□ -1.46
Smarcc1-207ENSMUST00000199896 Abca13Q5SSE9 5034 aa5.89□□□□□ -1.47
Smarcc1-207ENSMUST00000199896 Krtap4-6Q3V4B7 195 aa5.87□□□□□ -1.47
Smarcc1-207ENSMUST00000199896 Krtap9-3Q3V2C1 136 aa5.84□□□□□ -1.47
Smarcc1-207ENSMUST00000199896 Krtap19-4Q925H7 84 aa5.79□□□□□ -1.48
Smarcc1-207ENSMUST00000199896 4932415D10RikA0A1W2P6U8 4986 aa5.73□□□□□ -1.49
Smarcc1-207ENSMUST00000199896 Syne1Q6ZWR6 8799 aa5.69□□□□□ -1.5
Smarcc1-207ENSMUST00000199896 Lce1a2Q9D1K4 149 aa5.68□□□□□ -1.5
Smarcc1-207ENSMUST00000199896 Ubr4A2AN08 5180 aa5.67□□□□□ -1.5
Smarcc1-207ENSMUST00000199896 Krtap4-1Q3UUY3 169 aa5.61□□□□□ -1.51
Smarcc1-207ENSMUST00000199896 Fat4Q2PZL6 4981 aa5.54□□□□□ -1.52
Smarcc1-207ENSMUST00000199896 Gm11596B1AQB0 205 aa5.53□□□□□ -1.52
Smarcc1-207ENSMUST00000199896 Gm11564A2A4L9 201 aa5.49□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms