RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Dync2h1Q45VK7 4306 aa5.47□□□□□ -1.53
Pcdha8-201ENSMUST00000194038 Lce1mQ9CR91 182 aa5.42□□□□□ -1.54
Pcdha8-201ENSMUST00000194038 2310046K23RikA0A0A6YVW6 87 aa5.4□□□□□ -1.54
Pcdha8-201ENSMUST00000194038 Dync1h1Q9JHU4 4644 aaKnown RBP5.4□□□□□ -1.55
Pcdha8-201ENSMUST00000194038 PrkdcP97313 4128 aa5.39□□□□□ -1.55
Pcdha8-201ENSMUST00000194038 Sprr2kO70562 68 aa5.39□□□□□ -1.55
Pcdha8-201ENSMUST00000194038 Dnah11E9Q7N9 4488 aa5.36□□□□□ -1.55
Pcdha8-201ENSMUST00000194038 Dnah2P0C6F1 4456 aa5.35□□□□□ -1.55
Pcdha8-201ENSMUST00000194038 Xirp2Q4U4S6 3784 aa5.34□□□□□ -1.55
Pcdha8-201ENSMUST00000194038 Pkd1O08852 4293 aa5.33□□□□□ -1.56
Pcdha8-201ENSMUST00000194038 SacsQ9JLC8 4582 aa5.33□□□□□ -1.56
Pcdha8-201ENSMUST00000194038 Dnah3Q8BW94 4083 aa5.32□□□□□ -1.56
Pcdha8-201ENSMUST00000194038 Csmd3Q80T79 3707 aa5.31□□□□□ -1.56
Pcdha8-201ENSMUST00000194038 Gm10100J3QK64 120 aa5.31□□□□□ -1.56
Pcdha8-201ENSMUST00000194038 Dnah1E9Q8T7 4250 aa5.31□□□□□ -1.56
Pcdha8-201ENSMUST00000194038 ApobE9Q414 4505 aa5.3□□□□□ -1.56
Pcdha8-201ENSMUST00000194038 CubnQ9JLB4 3623 aa5.29□□□□□ -1.56
Pcdha8-201ENSMUST00000194038 Dnah9B1AR51 4484 aa5.28□□□□□ -1.56
Pcdha8-201ENSMUST00000194038 Krtap16-3Q8C1I6 86 aa5.26□□□□□ -1.57
Pcdha8-201ENSMUST00000194038 Kmt2aP55200 3966 aa5.26□□□□□ -1.57
Pcdha8-201ENSMUST00000194038 Dnah6E9Q0B6 4144 aa5.24□□□□□ -1.57
Pcdha8-201ENSMUST00000194038 Krtap19-3Q925H6 87 aa5.24□□□□□ -1.57
Pcdha8-201ENSMUST00000194038 Hspg2Q05793 3707 aaKnown RBP5.23□□□□□ -1.57
Pcdha8-201ENSMUST00000194038 Lce3bQ9CQM7 98 aa5.21□□□□□ -1.57
Pcdha8-201ENSMUST00000194038 Krtap9-5A2A5X3 358 aa5.19□□□□□ -1.58
Pcdha8-201ENSMUST00000194038 Gm10142J3KMP7 120 aa5.19□□□□□ -1.58
Pcdha8-201ENSMUST00000194038 Lce3cQ91V05 98 aa5.18□□□□□ -1.58
Pcdha8-201ENSMUST00000194038 Gm10272F7CZ33 110 aa5.18□□□□□ -1.58
Pcdha8-201ENSMUST00000194038 Lrp1bQ9JI18 4599 aa5.16□□□□□ -1.58
Pcdha8-201ENSMUST00000194038 Fat1A0A1L1SQU7 4645 aa5.16□□□□□ -1.58
Pcdha8-201ENSMUST00000194038 Ryr1E9PZQ0 5035 aa5.16□□□□□ -1.58
Pcdha8-201ENSMUST00000194038 Dnah8Q91XQ0 4731 aa5.16□□□□□ -1.58
Pcdha8-201ENSMUST00000194038 Krtap19-1Q925H2 87 aa5.13□□□□□ -1.59
Pcdha8-201ENSMUST00000194038 Prm1P02319 51 aa5.13□□□□□ -1.59
Pcdha8-201ENSMUST00000194038 Dnah7bL7N1Y0 4068 aa5.12□□□□□ -1.59
Pcdha8-201ENSMUST00000194038 Sprr2gO70558 76 aa5.12□□□□□ -1.59
Pcdha8-201ENSMUST00000194038 Lce3eF8VQJ0 98 aa5.06□□□□□ -1.6
Pcdha8-201ENSMUST00000194038 Lce3fQ6PAI4 98 aa5.06□□□□□ -1.6
Pcdha8-201ENSMUST00000194038 Mycbp2Q7TPH6 4711 aa5.05□□□□□ -1.6
Pcdha8-201ENSMUST00000194038 Fras1Q80T14 4010 aa5.04□□□□□ -1.6
Pcdha8-201ENSMUST00000194038 Hectd4E9Q2E4 4418 aa5.01□□□□□ -1.61
Pcdha8-201ENSMUST00000194038 Krtap22-2J3QNX6 67 aa5.01□□□□□ -1.61
Pcdha8-201ENSMUST00000194038 Fat3Q8BNA6 4555 aa5□□□□□ -1.61
Pcdha8-201ENSMUST00000194038 Lce3dE9Q8V1 98 aa4.99□□□□□ -1.61
Pcdha8-201ENSMUST00000194038 Mt2P02798 61 aa4.99□□□□□ -1.61
Pcdha8-201ENSMUST00000194038 Ryr3A2AGL3 4863 aa4.99□□□□□ -1.61
Pcdha8-201ENSMUST00000194038 Ryr2E9Q401 4966 aaKnown RBP4.96□□□□□ -1.62
Pcdha8-201ENSMUST00000194038 Gm7735D3YX18 52 aa4.94□□□□□ -1.62
Pcdha8-201ENSMUST00000194038 Lce3aQ497I5 98 aa4.93□□□□□ -1.62
Pcdha8-201ENSMUST00000194038 Lrp1Q91ZX7 4545 aaKnown RBP4.91□□□□□ -1.62
Pcdha8-201ENSMUST00000194038 Herc2Q4U2R1 4836 aa4.88□□□□□ -1.63
Pcdha8-201ENSMUST00000194038 Krtap19-2Q925I0 141 aa4.87□□□□□ -1.63
Pcdha8-201ENSMUST00000194038 Gm9789Q8BIG3 52 aa4.85□□□□□ -1.63
Pcdha8-201ENSMUST00000194038 Dnah7cA0A087WR13 4024 aa4.82□□□□□ -1.64
Pcdha8-201ENSMUST00000194038 Dnah7aE9Q0T8 4024 aa4.82□□□□□ -1.64
Pcdha8-201ENSMUST00000194038 Krtap9-3Q3V2C1 136 aa4.81□□□□□ -1.64
Pcdha8-201ENSMUST00000194038 Dnhd1D3Z2X2 4750 aa4.8□□□□□ -1.64
Pcdha8-201ENSMUST00000194038 Lce1jD3YUU5 139 aa4.79□□□□□ -1.64
Pcdha8-201ENSMUST00000194038 Kiaa1109A2AAE1 5005 aa4.79□□□□□ -1.64
Pcdha8-201ENSMUST00000194038 Krtap19-4Q925H7 84 aa4.76□□□□□ -1.65
Pcdha8-201ENSMUST00000194038 Krtap1-3A2A588 173 aa4.76□□□□□ -1.65
Pcdha8-201ENSMUST00000194038 Sprr2iO70560 76 aa4.75□□□□□ -1.65
Pcdha8-201ENSMUST00000194038 Fat2Q5F226 4351 aa4.75□□□□□ -1.65
Pcdha8-201ENSMUST00000194038 Gm10024A0A0A0MQA4 119 aa4.74□□□□□ -1.65
Pcdha8-201ENSMUST00000194038 Herc1E9PZP8 4859 aa4.71□□□□□ -1.66
Pcdha8-201ENSMUST00000194038 Lce1gQ9D195 139 aa4.68□□□□□ -1.66
Pcdha8-201ENSMUST00000194038 Lce1iQ9D6P5 149 aa4.68□□□□□ -1.66
Pcdha8-201ENSMUST00000194038 Lce1hQ9D6R3 140 aa4.68□□□□□ -1.66
Pcdha8-201ENSMUST00000194038 Birc6O88738 4882 aa4.67□□□□□ -1.66
Pcdha8-201ENSMUST00000194038 Gm38119A0A0A6YX29 146 aa4.66□□□□□ -1.66
Pcdha8-201ENSMUST00000194038 Lrp2A2ARV4 4660 aa4.65□□□□□ -1.67
Pcdha8-201ENSMUST00000194038 Vps13bQ80TY5 3993 aa4.64□□□□□ -1.67
Pcdha8-201ENSMUST00000194038 A0A1Y7VLE6 161 aa4.63□□□□□ -1.67
Pcdha8-201ENSMUST00000194038 Pkhd1l1Q80ZA4 4249 aa4.63□□□□□ -1.67
Pcdha8-201ENSMUST00000194038 Lce1fB9EJP6 147 aa4.61□□□□□ -1.67
Pcdha8-201ENSMUST00000194038 Lce1cQ9D1C5 147 aa4.61□□□□□ -1.67
Pcdha8-201ENSMUST00000194038 Lce1lQ9D1G7 135 aa4.61□□□□□ -1.67
Pcdha8-201ENSMUST00000194038 Lce1dQ9D731 133 aa4.61□□□□□ -1.67
Pcdha8-201ENSMUST00000194038 HydinQ80W93 5154 aa4.59□□□□□ -1.67
Pcdha8-201ENSMUST00000194038 Gm10061D3Z714 54 aa4.58□□□□□ -1.68
Pcdha8-201ENSMUST00000194038 Lce1eQ9D139 143 aa4.58□□□□□ -1.68
Pcdha8-201ENSMUST00000194038 Lce1bQ9D149 137 aa4.55□□□□□ -1.68
Pcdha8-201ENSMUST00000194038 Sprr2eO70556 76 aa4.53□□□□□ -1.68
Pcdha8-201ENSMUST00000194038 Gm11569B1AQB1 180 aa4.52□□□□□ -1.69
Pcdha8-201ENSMUST00000194038 Kmt2cQ8BRH4 4903 aa4.5□□□□□ -1.69
Pcdha8-201ENSMUST00000194038 PcloQ9QYX7 5068 aa4.43□□□□□ -1.7
Pcdha8-201ENSMUST00000194038 Sprr2hO70559 108 aa4.4□□□□□ -1.71
Pcdha8-201ENSMUST00000194038 Sprr2dO70555 85 aa4.39□□□□□ -1.71
Pcdha8-201ENSMUST00000194038 Pkhd1E9PZ36 4059 aa4.39□□□□□ -1.71
Pcdha8-201ENSMUST00000194038 Krtap4-2B1AQ85 167 aa4.36□□□□□ -1.71
Pcdha8-201ENSMUST00000194038 Sprr2fO70557 76 aa4.36□□□□□ -1.71
Pcdha8-201ENSMUST00000194038 Lce1a2Q9D1K4 149 aa4.35□□□□□ -1.71
Pcdha8-201ENSMUST00000194038 4932415D10RikA0A1W2P6U8 4986 aa4.35□□□□□ -1.71
Pcdha8-201ENSMUST00000194038 Krtap31-1Q9D644 177 aa4.34□□□□□ -1.71
Pcdha8-201ENSMUST00000194038 Gm11938Q9D3H4 131 aa4.28□□□□□ -1.72
Pcdha8-201ENSMUST00000194038 Abca13Q5SSE9 5034 aa4.28□□□□□ -1.72
Pcdha8-201ENSMUST00000194038 Syne1Q6ZWR6 8799 aa4.26□□□□□ -1.73
Pcdha8-201ENSMUST00000194038 Krtap4-6Q3V4B7 195 aa4.22□□□□□ -1.73
Pcdha8-201ENSMUST00000194038 A030003K21RikA0A1Y7VIM3 128 aa4.19□□□□□ -1.74
Pcdha8-201ENSMUST00000194038 Mt4P47945 62 aa4.18□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 62.6 ms