RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Krtap3-1A2A591 98 aa14□□□□□ -0.17
Ldb1-208ENSMUST00000185355 2210017I01RikA0A0A6YVV1 95 aa14□□□□□ -0.17
Ldb1-208ENSMUST00000185355 HydinQ80W93 5154 aa13.98□□□□□ -0.17
Ldb1-208ENSMUST00000185355 Gm3880A0A1B0GSB3 72 aa13.91□□□□□ -0.18
Ldb1-208ENSMUST00000185355 PcloQ9QYX7 5068 aa13.81□□□□□ -0.2
Ldb1-208ENSMUST00000185355 Sec61bQ9CQS8 96 aaKnown RBP13.71□□□□□ -0.21
Ldb1-208ENSMUST00000185355 Lrp2A2ARV4 4660 aa13.64□□□□□ -0.23
Ldb1-208ENSMUST00000185355 Krtap13-1Q8K198 168 aa13.6□□□□□ -0.23
Ldb1-208ENSMUST00000185355 Lce1mQ9CR91 182 aa13.55□□□□□ -0.24
Ldb1-208ENSMUST00000185355 2310057N15RikQ9D6T8 200 aa13.54□□□□□ -0.24
Ldb1-208ENSMUST00000185355 BC029722A0A0N4SW31 51 aa13.47□□□□□ -0.25
Ldb1-208ENSMUST00000185355 Gm12216A0A1W2P827 62 aa13.4□□□□□ -0.27
Ldb1-208ENSMUST00000185355 Krtap1-5A2A590 122 aa13.38□□□□□ -0.27
Ldb1-208ENSMUST00000185355 Herc1E9PZP8 4859 aa13.35□□□□□ -0.27
Ldb1-208ENSMUST00000185355 Romo1P60603 79 aa13.34□□□□□ -0.27
Ldb1-208ENSMUST00000185355 B930094E09RikQ8C4T2 136 aa13.21□□□□□ -0.29
Ldb1-208ENSMUST00000185355 Fam229aB2KGE5 128 aa13.2□□□□□ -0.3
Ldb1-208ENSMUST00000185355 Gm17402F6Z0L5 76 aa13.14□□□□□ -0.31
Ldb1-208ENSMUST00000185355 Krtap16-3Q8C1I6 86 aa13.14□□□□□ -0.31
Ldb1-208ENSMUST00000185355 Gm19426M0QWC7 77 aa13.09□□□□□ -0.31
Ldb1-208ENSMUST00000185355 Gm18596A0A1W2P860 280 aa13.06□□□□□ -0.32
Ldb1-208ENSMUST00000185355 CriptO70333 101 aa13.06□□□□□ -0.32
Ldb1-208ENSMUST00000185355 Krtap19-1Q925H2 87 aa13□□□□□ -0.33
Ldb1-208ENSMUST00000185355 Crct1Q6PAI5 102 aa12.92□□□□□ -0.34
Ldb1-208ENSMUST00000185355 Gm21887J3QQ04 176 aa12.9□□□□□ -0.34
Ldb1-208ENSMUST00000185355 Krtap19-3Q925H6 87 aa12.89□□□□□ -0.35
Ldb1-208ENSMUST00000185355 Gm10318A0A1W2P728 225 aa12.84□□□□□ -0.35
Ldb1-208ENSMUST00000185355 Ush2AQ2QI47 5193 aa12.79□□□□□ -0.36
Ldb1-208ENSMUST00000185355 Sprr2a3Q4KL71 83 aa12.76□□□□□ -0.37
Ldb1-208ENSMUST00000185355 Sprr2a1Q9CQK8 83 aa12.76□□□□□ -0.37
Ldb1-208ENSMUST00000185355 Spink7Q6IE32 76 aa12.73□□□□□ -0.37
Ldb1-208ENSMUST00000185355 Gm19402J3QJV4 266 aa12.67□□□□□ -0.38
Ldb1-208ENSMUST00000185355 Hmcn2A2AJ76 5100 aa12.63□□□□□ -0.39
Ldb1-208ENSMUST00000185355 Prm1P02319 51 aa12.59□□□□□ -0.39
Ldb1-208ENSMUST00000185355 Gm9789Q8BIG3 52 aa12.58□□□□□ -0.39
Ldb1-208ENSMUST00000185355 Krtap1-4Q3V2D6 188 aa12.54□□□□□ -0.4
Ldb1-208ENSMUST00000185355 Ubr4A2AN08 5180 aa12.53□□□□□ -0.4
Ldb1-208ENSMUST00000185355 Gm7735D3YX18 52 aa12.52□□□□□ -0.41
Ldb1-208ENSMUST00000185355 Krtap1-3A2A588 173 aa12.42□□□□□ -0.42
Ldb1-208ENSMUST00000185355 ZanO88799 5376 aa12.32□□□□□ -0.44
Ldb1-208ENSMUST00000185355 4932415D10RikA0A1W2P6U8 4986 aa12.3□□□□□ -0.44
Ldb1-208ENSMUST00000185355 Krtap7-1Q9D3I6 87 aa12.23□□□□□ -0.45
Ldb1-208ENSMUST00000185355 Gm40193A0A1B0GT39 78 aa12.15□□□□□ -0.46
Ldb1-208ENSMUST00000185355 Mp68P56379 58 aa12.14□□□□□ -0.47
Ldb1-208ENSMUST00000185355 LorP18165 486 aa12.09□□□□□ -0.47
Ldb1-208ENSMUST00000185355 Camk2n1Q6QWF9 78 aa12.09□□□□□ -0.47
Ldb1-208ENSMUST00000185355 Lce1jD3YUU5 139 aa12.01□□□□□ -0.49
Ldb1-208ENSMUST00000185355 Krtap12-1Q9Z287 130 aa12.01□□□□□ -0.49
Ldb1-208ENSMUST00000185355 Gm19668J3QMD1 248 aa11.99□□□□□ -0.49
Ldb1-208ENSMUST00000185355 Krtap19-9aF8WH65 55 aa11.97□□□□□ -0.49
Ldb1-208ENSMUST00000185355 Gm20538F6Z9R1 75 aa11.95□□□□□ -0.5
Ldb1-208ENSMUST00000185355 Rnf213E9Q555 5152 aaKnown RBP11.9□□□□□ -0.5
Ldb1-208ENSMUST00000185355 Fat4Q2PZL6 4981 aa11.88□□□□□ -0.51
Ldb1-208ENSMUST00000185355 Prm2P07978 107 aa11.62□□□□□ -0.55
Ldb1-208ENSMUST00000185355 SspoQ8CG65 4998 aa11.47□□□□□ -0.57
Ldb1-208ENSMUST00000185355 Krtap19-2Q925I0 141 aa11.43□□□□□ -0.58
Ldb1-208ENSMUST00000185355 Krtap17-1A2A5X6 109 aa11.39□□□□□ -0.59
Ldb1-208ENSMUST00000185355 Krtap9-5A2A5X3 358 aa11.32□□□□□ -0.6
Ldb1-208ENSMUST00000185355 Krtap8-1O08633 61 aa11.31□□□□□ -0.6
Ldb1-208ENSMUST00000185355 Ndufaf8A2AMZ4 74 aa11.29□□□□□ -0.6
Ldb1-208ENSMUST00000185355 Lce1iQ9D6P5 149 aa11.29□□□□□ -0.6
Ldb1-208ENSMUST00000185355 Tnp1P10856 55 aa11.28□□□□□ -0.6
Ldb1-208ENSMUST00000185355 Gm10061D3Z714 54 aa11.24□□□□□ -0.61
Ldb1-208ENSMUST00000185355 Lce1a2Q9D1K4 149 aa11.18□□□□□ -0.62
Ldb1-208ENSMUST00000185355 Krtap19-9bQ99NG9 58 aa11.15□□□□□ -0.63
Ldb1-208ENSMUST00000185355 Gm11569B1AQB1 180 aa10.79□□□□□ -0.68
Ldb1-208ENSMUST00000185355 2310046K23RikA0A0A6YVW6 87 aa10.73□□□□□ -0.69
Ldb1-208ENSMUST00000185355 Gm6358A0A087WPH4 74 aa10.72□□□□□ -0.69
Ldb1-208ENSMUST00000185355 Muc5bE9Q5I3 4800 aa10.7□□□□□ -0.7
Ldb1-208ENSMUST00000185355 Mt2P02798 61 aa10.64□□□□□ -0.71
Ldb1-208ENSMUST00000185355 Krtap9-3Q3V2C1 136 aa10.55□□□□□ -0.72
Ldb1-208ENSMUST00000185355 Lce1hQ9D6R3 140 aa10.48□□□□□ -0.73
Ldb1-208ENSMUST00000185355 Krtap4-2B1AQ85 167 aa10.13□□□□□ -0.79
Ldb1-208ENSMUST00000185355 Lce1gQ9D195 139 aa10.08□□□□□ -0.8
Ldb1-208ENSMUST00000185355 Krtap22-2J3QNX6 67 aa10.04□□□□□ -0.8
Ldb1-208ENSMUST00000185355 Mdn1A2ANY6 5589 aaKnown RBP10.02□□□□□ -0.81
Ldb1-208ENSMUST00000185355 Gm9112A2AI92 75 aa10□□□□□ -0.81
Ldb1-208ENSMUST00000185355 Gm11555B1AQ89 175 aa9.95□□□□□ -0.82
Ldb1-208ENSMUST00000185355 Krtap4-6Q3V4B7 195 aa9.89□□□□□ -0.83
Ldb1-208ENSMUST00000185355 Gm11562A0PK51 136 aa9.87□□□□□ -0.83
Ldb1-208ENSMUST00000185355 Syne2Q6ZWQ0 6874 aaKnown RBP9.77□□□□□ -0.85
Ldb1-208ENSMUST00000185355 Gm11596B1AQB0 205 aa9.76□□□□□ -0.85
Ldb1-208ENSMUST00000185355 Krtap4-1Q3UUY3 169 aa9.7□□□□□ -0.86
Ldb1-208ENSMUST00000185355 Gm10272F7CZ33 110 aa9.63□□□□□ -0.87
Ldb1-208ENSMUST00000185355 Sprr2gO70558 76 aa9.62□□□□□ -0.87
Ldb1-208ENSMUST00000185355 Lce1dQ9D731 133 aa9.58□□□□□ -0.88
Ldb1-208ENSMUST00000185355 Sprr2dO70555 85 aa9.49□□□□□ -0.89
Ldb1-208ENSMUST00000185355 Gm11564A2A4L9 201 aa9.43□□□□□ -0.9
Ldb1-208ENSMUST00000185355 Gm11563B1AQ90 168 aa9.43□□□□□ -0.9
Ldb1-208ENSMUST00000185355 Gm11595B1AQA7 289 aa9.43□□□□□ -0.9
Ldb1-208ENSMUST00000185355 Krtap4-8B1AQA8 209 aa9.43□□□□□ -0.9
Ldb1-208ENSMUST00000185355 Gm11938Q9D3H4 131 aa9.36□□□□□ -0.91
Ldb1-208ENSMUST00000185355 4933428G20RikQ9D3X4 101 aa9.35□□□□□ -0.91
Ldb1-208ENSMUST00000185355 Lce1eQ9D139 143 aa9.32□□□□□ -0.92
Ldb1-208ENSMUST00000185355 Krtap4-9B1AQA9 244 aa9.18□□□□□ -0.94
Ldb1-208ENSMUST00000185355 Mt4P47945 62 aa9.17□□□□□ -0.94
Ldb1-208ENSMUST00000185355 Fsip2A2ARZ3 6995 aa9.05□□□□□ -0.96
Ldb1-208ENSMUST00000185355 Krtap19-4Q925H7 84 aa8.98□□□□□ -0.97
Ldb1-208ENSMUST00000185355 Lce1cQ9D1C5 147 aa8.95□□□□□ -0.98
Ldb1-208ENSMUST00000185355 Lce1bQ9D149 137 aa8.91□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 698.9 ms