RNA–Protein interactions for RNA: ENSMUST00000178564.1

Snrnp48-202, Transcript of U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

TSL 5 BASIC

Gene Snrnp48, Length 847 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48-202ENSMUST00000178564 Krtap12-1Q9Z287 130 aa8.01□□□□□ -1.13
Snrnp48-202ENSMUST00000178564 Gm19426M0QWC7 77 aa8□□□□□ -1.13
Snrnp48-202ENSMUST00000178564 Defb38Q7TNV7 63 aa8□□□□□ -1.13
Snrnp48-202ENSMUST00000178564 4930507D05RikQ8C9C9 103 aa8□□□□□ -1.13
Snrnp48-202ENSMUST00000178564 Gtf2h5Q8K2X8 71 aa8□□□□□ -1.13
Snrnp48-202ENSMUST00000178564 Krtap3-1A2A591 98 aa7.93□□□□□ -1.14
Snrnp48-202ENSMUST00000178564 A030014E15RikA0A1Y7VJV2 120 aa7.91□□□□□ -1.14
Snrnp48-202ENSMUST00000178564 Gm21798J3QNU5 87 aa7.91□□□□□ -1.14
Snrnp48-202ENSMUST00000178564 BatfO35284 125 aa7.91□□□□□ -1.14
Snrnp48-202ENSMUST00000178564 A0A1Y7VJ07 166 aa7.9□□□□□ -1.14
Snrnp48-202ENSMUST00000178564 Pxt1Q8K459 51 aa7.87□□□□□ -1.15
Snrnp48-202ENSMUST00000178564 Spint4Q9D263 159 aa7.86□□□□□ -1.15
Snrnp48-202ENSMUST00000178564 Gm11564A2A4L9 201 aa7.85□□□□□ -1.15
Snrnp48-202ENSMUST00000178564 Gm11595B1AQA7 289 aa7.85□□□□□ -1.15
Snrnp48-202ENSMUST00000178564 Krtap4-8B1AQA8 209 aa7.85□□□□□ -1.15
Snrnp48-202ENSMUST00000178564 Pla2g10Q9QXX3 151 aa7.85□□□□□ -1.15
Snrnp48-202ENSMUST00000178564 Gm6358A0A087WPH4 74 aa7.83□□□□□ -1.16
Snrnp48-202ENSMUST00000178564 Prm2P07978 107 aa7.82□□□□□ -1.16
Snrnp48-202ENSMUST00000178564 Bud31Q6PGH1 103 aa7.8□□□□□ -1.16
Snrnp48-202ENSMUST00000178564 Krtap19-9aF8WH65 55 aa7.79□□□□□ -1.16
Snrnp48-202ENSMUST00000178564 Ndufc1Q9CQY9 76 aa7.78□□□□□ -1.16
Snrnp48-202ENSMUST00000178564 Defb1P56386 69 aa7.72□□□□□ -1.17
Snrnp48-202ENSMUST00000178564 Gm7544A0A1Y7VJ58 118 aa7.7□□□□□ -1.18
Snrnp48-202ENSMUST00000178564 Gm10160F6Y577 67 aa7.69□□□□□ -1.18
Snrnp48-202ENSMUST00000178564 Cox6b2Q80ZN9 88 aa7.69□□□□□ -1.18
Snrnp48-202ENSMUST00000178564 Atox1O08997 68 aaKnown RBP7.68□□□□□ -1.18
Snrnp48-202ENSMUST00000178564 Gm17606F6ZL36 78 aa7.66□□□□□ -1.18
Snrnp48-202ENSMUST00000178564 Gm10643Q3URG9 111 aa7.66□□□□□ -1.18
Snrnp48-202ENSMUST00000178564 BC029722A0A0N4SW31 51 aa7.65□□□□□ -1.18
Snrnp48-202ENSMUST00000178564 A030005L19RikA0A1Y7VIU2 113 aa7.65□□□□□ -1.18
Snrnp48-202ENSMUST00000178564 Gm20537G3UYK7 97 aa7.63□□□□□ -1.19
Snrnp48-202ENSMUST00000178564 Krtap4-9B1AQA9 244 aa7.61□□□□□ -1.19
Snrnp48-202ENSMUST00000178564 CriptO70333 101 aa7.6□□□□□ -1.19
Snrnp48-202ENSMUST00000178564 Lce1dQ9D731 133 aa7.6□□□□□ -1.19
Snrnp48-202ENSMUST00000178564 Krtap31-2Q8CAY5 177 aa7.59□□□□□ -1.19
Snrnp48-202ENSMUST00000178564 Gm10382Q3V0T5 144 aa7.55□□□□□ -1.2
Snrnp48-202ENSMUST00000178564 Coa6Q8BGD8 79 aa7.55□□□□□ -1.2
Snrnp48-202ENSMUST00000178564 Lce1iQ9D6P5 149 aa7.55□□□□□ -1.2
Snrnp48-202ENSMUST00000178564 Fam240bJ3QMB3 78 aa7.53□□□□□ -1.2
Snrnp48-202ENSMUST00000178564 4930518I15RikQ3V2W7 57 aa7.53□□□□□ -1.2
Snrnp48-202ENSMUST00000178564 Spink7Q6IE32 76 aa7.53□□□□□ -1.2
Snrnp48-202ENSMUST00000178564 Lce1lQ9D1G7 135 aa7.52□□□□□ -1.21
Snrnp48-202ENSMUST00000178564 Mt4P47945 62 aa7.47□□□□□ -1.21
Snrnp48-202ENSMUST00000178564 Lce1hQ9D6R3 140 aa7.46□□□□□ -1.22
Snrnp48-202ENSMUST00000178564 SptssbQ925E8 76 aa7.44□□□□□ -1.22
Snrnp48-202ENSMUST00000178564 Lce1a2Q9D1K4 149 aa7.42□□□□□ -1.22
Snrnp48-202ENSMUST00000178564 Atp5eP56382 52 aa7.41□□□□□ -1.22
Snrnp48-202ENSMUST00000178564 Mt2P02798 61 aa7.4□□□□□ -1.22
Snrnp48-202ENSMUST00000178564 Fsip2A2ARZ3 6995 aa7.4□□□□□ -1.23
Snrnp48-202ENSMUST00000178564 B230307C23RikQ8BLB2 64 aa7.38□□□□□ -1.23
Snrnp48-202ENSMUST00000178564 Gm45213A0A0U1RNZ6 101 aa7.36□□□□□ -1.23
Snrnp48-202ENSMUST00000178564 Krtap9-3Q3V2C1 136 aa7.36□□□□□ -1.23
Snrnp48-202ENSMUST00000178564 Krtap4-13Q9D7P3 165 aa7.34□□□□□ -1.23
Snrnp48-202ENSMUST00000178564 Serp2Q6TAW2 65 aa7.33□□□□□ -1.24
Snrnp48-202ENSMUST00000178564 Limd2Q8BGB5 128 aa7.33□□□□□ -1.24
Snrnp48-202ENSMUST00000178564 Krtap6-3A0A087WQL6 57 aa7.29□□□□□ -1.24
Snrnp48-202ENSMUST00000178564 Coa5Q99M07 74 aa7.29□□□□□ -1.24
Snrnp48-202ENSMUST00000178564 Krtap8-1O08633 61 aa7.28□□□□□ -1.24
Snrnp48-202ENSMUST00000178564 Lce1bQ9D149 137 aa7.2□□□□□ -1.26
Snrnp48-202ENSMUST00000178564 Gm21887J3QQ04 176 aa7.18□□□□□ -1.26
Snrnp48-202ENSMUST00000178564 Sprr2kO70562 68 aa7.12□□□□□ -1.27
Snrnp48-202ENSMUST00000178564 Sprr2a3Q4KL71 83 aa7.1□□□□□ -1.27
Snrnp48-202ENSMUST00000178564 Sprr2a1Q9CQK8 83 aa7.1□□□□□ -1.27
Snrnp48-202ENSMUST00000178564 Smim20D3Z7Q2 69 aa7.05□□□□□ -1.28
Snrnp48-202ENSMUST00000178564 Anapc13Q8R034 74 aa7.05□□□□□ -1.28
Snrnp48-202ENSMUST00000178564 2300003K06RikA2A4M0 262 aa7.04□□□□□ -1.28
Snrnp48-202ENSMUST00000178564 Krtap22-2J3QNX6 67 aa7.04□□□□□ -1.28
Snrnp48-202ENSMUST00000178564 Gm20661K7N787 53 aa7.04□□□□□ -1.28
Snrnp48-202ENSMUST00000178564 Gm17402F6Z0L5 76 aa6.92□□□□□ -1.3
Snrnp48-202ENSMUST00000178564 Gm9955Q8CEJ8 102 aa6.87□□□□□ -1.31
Snrnp48-202ENSMUST00000178564 Sec61gP60060 68 aa6.86□□□□□ -1.31
Snrnp48-202ENSMUST00000178564 H2al1aQ5M8Q2 105 aa6.85□□□□□ -1.31
Snrnp48-202ENSMUST00000178564 H2al1eQ810S6 105 aa6.85□□□□□ -1.31
Snrnp48-202ENSMUST00000178564 Serp1Q9Z1W5 66 aa6.84□□□□□ -1.31
Snrnp48-202ENSMUST00000178564 Smlr1J3QMJ4 66 aa6.81□□□□□ -1.32
Snrnp48-202ENSMUST00000178564 Krtap31-1Q9D644 177 aa6.81□□□□□ -1.32
Snrnp48-202ENSMUST00000178564 SnurfQ9WU12 71 aa6.81□□□□□ -1.32
Snrnp48-202ENSMUST00000178564 Lce1eQ9D139 143 aa6.78□□□□□ -1.32
Snrnp48-202ENSMUST00000178564 Uqcr11Q9CPX8 56 aa6.76□□□□□ -1.33
Snrnp48-202ENSMUST00000178564 Cdc42se1Q8BHL7 80 aa6.74□□□□□ -1.33
Snrnp48-202ENSMUST00000178564 Pet100P0DJE0 76 aa6.73□□□□□ -1.33
Snrnp48-202ENSMUST00000178564 Sprr2gO70558 76 aa6.67□□□□□ -1.34
Snrnp48-202ENSMUST00000178564 Krtap20-2E9Q0A8 60 aa6.65□□□□□ -1.34
Snrnp48-202ENSMUST00000178564 H2al1bA0A087WP11 105 aa6.64□□□□□ -1.35
Snrnp48-202ENSMUST00000178564 Phxr4P15974 95 aa6.63□□□□□ -1.35
Snrnp48-202ENSMUST00000178564 Gm10197F6QEY5 67 aa6.62□□□□□ -1.35
Snrnp48-202ENSMUST00000178564 Krtap19-9bQ99NG9 58 aa6.61□□□□□ -1.35
Snrnp48-202ENSMUST00000178564 Gm11559Q9D3H7 191 aa6.6□□□□□ -1.35
Snrnp48-202ENSMUST00000178564 Tmem258P61166 79 aa6.57□□□□□ -1.36
Snrnp48-202ENSMUST00000178564 Ndufb1P0DN34 57 aa6.47□□□□□ -1.37
Snrnp48-202ENSMUST00000178564 Camk2n1Q6QWF9 78 aa6.46□□□□□ -1.38
Snrnp48-202ENSMUST00000178564 2310046K23RikA0A0A6YVW6 87 aa6.43□□□□□ -1.38
Snrnp48-202ENSMUST00000178564 Gm19935A0A1B0GSF9 52 aa6.43□□□□□ -1.38
Snrnp48-202ENSMUST00000178564 SmcpP15265 143 aa6.41□□□□□ -1.38
Snrnp48-202ENSMUST00000178564 Brk1Q91VR8 75 aa6.34□□□□□ -1.39
Snrnp48-202ENSMUST00000178564 A0A286YCP9 139 aa6.32□□□□□ -1.4
Snrnp48-202ENSMUST00000178564 Krtap5-2Q9D5Z7 189 aa6.28□□□□□ -1.4
Snrnp48-202ENSMUST00000178564 Gm10100J3QK64 120 aa6.25□□□□□ -1.41
Snrnp48-202ENSMUST00000178564 Sprr2iO70560 76 aa6.18□□□□□ -1.42
Snrnp48-202ENSMUST00000178564 Lce1kJ3QP15 125 aa6.16□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 89.4 ms