RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Rpl37Q9D823 97 aa3.27□□□□□ -1.89
Lig4-202ENSMUST00000170033 Fat1A0A1L1SQU7 4645 aa3.27□□□□□ -1.89
Lig4-202ENSMUST00000170033 A0A1Y7VLE6 161 aa3.26□□□□□ -1.89
Lig4-202ENSMUST00000170033 Vps13bQ80TY5 3993 aa3.24□□□□□ -1.89
Lig4-202ENSMUST00000170033 Gm2696A0A1W2P709 240 aa3.24□□□□□ -1.89
Lig4-202ENSMUST00000170033 Gm17606F6ZL36 78 aa3.23□□□□□ -1.89
Lig4-202ENSMUST00000170033 Krtap28-13A0A087WQP5 138 aa3.21□□□□□ -1.9
Lig4-202ENSMUST00000170033 Krtap19-5O08632 62 aa3.2□□□□□ -1.9
Lig4-202ENSMUST00000170033 Gm10382Q3V0T5 144 aa3.19□□□□□ -1.9
Lig4-202ENSMUST00000170033 Ryr1E9PZQ0 5035 aa3.18□□□□□ -1.9
Lig4-202ENSMUST00000170033 B930094E09RikQ8C4T2 136 aa3.15□□□□□ -1.91
Lig4-202ENSMUST00000170033 Gm17402F6Z0L5 76 aa3.15□□□□□ -1.91
Lig4-202ENSMUST00000170033 Krtap7-1Q9D3I6 87 aa3.15□□□□□ -1.91
Lig4-202ENSMUST00000170033 Dnah8Q91XQ0 4731 aa3.12□□□□□ -1.91
Lig4-202ENSMUST00000170033 Ryr2E9Q401 4966 aaKnown RBP3.11□□□□□ -1.91
Lig4-202ENSMUST00000170033 A030005K14RikA0A1Y7VNY1 122 aa3.1□□□□□ -1.91
Lig4-202ENSMUST00000170033 A030005L19RikA0A1Y7VIU2 113 aa3.1□□□□□ -1.91
Lig4-202ENSMUST00000170033 Fat3Q8BNA6 4555 aa3.08□□□□□ -1.92
Lig4-202ENSMUST00000170033 Dnhd1D3Z2X2 4750 aa3.08□□□□□ -1.92
Lig4-202ENSMUST00000170033 Lrp1Q91ZX7 4545 aaKnown RBP3.07□□□□□ -1.92
Lig4-202ENSMUST00000170033 BC029722A0A0N4SW31 51 aa3.05□□□□□ -1.92
Lig4-202ENSMUST00000170033 Gm7544A0A1Y7VJ58 118 aa3.04□□□□□ -1.92
Lig4-202ENSMUST00000170033 Kmt2cQ8BRH4 4903 aa3.03□□□□□ -1.92
Lig4-202ENSMUST00000170033 Ryr3A2AGL3 4863 aa3.01□□□□□ -1.93
Lig4-202ENSMUST00000170033 Gm40193A0A1B0GT39 78 aa3.01□□□□□ -1.93
Lig4-202ENSMUST00000170033 Krtap1-5A2A590 122 aa3□□□□□ -1.93
Lig4-202ENSMUST00000170033 Gm19426M0QWC7 77 aa2.99□□□□□ -1.93
Lig4-202ENSMUST00000170033 Krtap4-1Q3UUY3 169 aa2.99□□□□□ -1.93
Lig4-202ENSMUST00000170033 Gm9736A0A1W2P7N1 277 aa2.99□□□□□ -1.93
Lig4-202ENSMUST00000170033 Krtap13-1Q8K198 168 aa2.96□□□□□ -1.94
Lig4-202ENSMUST00000170033 LorP18165 486 aa2.94□□□□□ -1.94
Lig4-202ENSMUST00000170033 Sprr2a3Q4KL71 83 aa2.91□□□□□ -1.94
Lig4-202ENSMUST00000170033 Sprr2a1Q9CQK8 83 aa2.91□□□□□ -1.94
Lig4-202ENSMUST00000170033 Birc6O88738 4882 aa2.9□□□□□ -1.94
Lig4-202ENSMUST00000170033 Mycbp2Q7TPH6 4711 aa2.88□□□□□ -1.95
Lig4-202ENSMUST00000170033 Gm11555B1AQ89 175 aa2.87□□□□□ -1.95
Lig4-202ENSMUST00000170033 Gm19402J3QJV4 266 aa2.86□□□□□ -1.95
Lig4-202ENSMUST00000170033 Abca13Q5SSE9 5034 aa2.86□□□□□ -1.95
Lig4-202ENSMUST00000170033 PcloQ9QYX7 5068 aa2.84□□□□□ -1.95
Lig4-202ENSMUST00000170033 A0A1Y7VJ07 166 aa2.82□□□□□ -1.96
Lig4-202ENSMUST00000170033 Herc2Q4U2R1 4836 aa2.81□□□□□ -1.96
Lig4-202ENSMUST00000170033 Lce1mQ9CR91 182 aa2.81□□□□□ -1.96
Lig4-202ENSMUST00000170033 Krtap16-3Q8C1I6 86 aa2.79□□□□□ -1.96
Lig4-202ENSMUST00000170033 Krtap19-1Q925H2 87 aa2.78□□□□□ -1.96
Lig4-202ENSMUST00000170033 Gm18596A0A1W2P860 280 aa2.76□□□□□ -1.97
Lig4-202ENSMUST00000170033 Gm11563B1AQ90 168 aa2.76□□□□□ -1.97
Lig4-202ENSMUST00000170033 Krtap4-7Q9D732 168 aa2.76□□□□□ -1.97
Lig4-202ENSMUST00000170033 Krtap1-4Q3V2D6 188 aa2.75□□□□□ -1.97
Lig4-202ENSMUST00000170033 Spink7Q6IE32 76 aa2.75□□□□□ -1.97
Lig4-202ENSMUST00000170033 Kiaa1109A2AAE1 5005 aa2.75□□□□□ -1.97
Lig4-202ENSMUST00000170033 Herc1E9PZP8 4859 aa2.75□□□□□ -1.97
Lig4-202ENSMUST00000170033 Lrp2A2ARV4 4660 aa2.75□□□□□ -1.97
Lig4-202ENSMUST00000170033 Krtap1-3A2A588 173 aa2.74□□□□□ -1.97
Lig4-202ENSMUST00000170033 Krtap19-3Q925H6 87 aa2.73□□□□□ -1.97
Lig4-202ENSMUST00000170033 HydinQ80W93 5154 aa2.73□□□□□ -1.97
Lig4-202ENSMUST00000170033 Lce1jD3YUU5 139 aa2.73□□□□□ -1.97
Lig4-202ENSMUST00000170033 A030014E15RikA0A1Y7VJV2 120 aa2.69□□□□□ -1.98
Lig4-202ENSMUST00000170033 4933428G20RikQ9D3X4 101 aa2.68□□□□□ -1.98
Lig4-202ENSMUST00000170033 Krtap17-1A2A5X6 109 aa2.67□□□□□ -1.98
Lig4-202ENSMUST00000170033 A030003K21RikA0A1Y7VIM3 128 aa2.66□□□□□ -1.98
Lig4-202ENSMUST00000170033 Gm6217A0A1Y7VJK9 128 aa2.66□□□□□ -1.98
Lig4-202ENSMUST00000170033 Tnp1P10856 55 aa2.66□□□□□ -1.98
Lig4-202ENSMUST00000170033 Krtap4-2B1AQ85 167 aa2.66□□□□□ -1.98
Lig4-202ENSMUST00000170033 Krtap19-9aF8WH65 55 aa2.64□□□□□ -1.99
Lig4-202ENSMUST00000170033 Ubr4A2AN08 5180 aa2.61□□□□□ -1.99
Lig4-202ENSMUST00000170033 Krtap12-1Q9Z287 130 aa2.6□□□□□ -1.99
Lig4-202ENSMUST00000170033 Lce1bQ9D149 137 aa2.6□□□□□ -1.99
Lig4-202ENSMUST00000170033 4932415D10RikA0A1W2P6U8 4986 aa2.59□□□□□ -1.99
Lig4-202ENSMUST00000170033 Ush2AQ2QI47 5193 aa2.58□□□□□ -2
Lig4-202ENSMUST00000170033 A0A286YCP9 139 aa2.58□□□□□ -2
Lig4-202ENSMUST00000170033 Krtap8-1O08633 61 aa2.58□□□□□ -2
Lig4-202ENSMUST00000170033 2310046K23RikA0A0A6YVW6 87 aa2.56□□□□□ -2
Lig4-202ENSMUST00000170033 Lce1hQ9D6R3 140 aa2.56□□□□□ -2
Lig4-202ENSMUST00000170033 Prm1P02319 51 aa2.56□□□□□ -2
Lig4-202ENSMUST00000170033 Gm9789Q8BIG3 52 aa2.56□□□□□ -2
Lig4-202ENSMUST00000170033 Gm7735D3YX18 52 aa2.55□□□□□ -2
Lig4-202ENSMUST00000170033 Hmcn2A2AJ76 5100 aa2.55□□□□□ -2
Lig4-202ENSMUST00000170033 Crct1Q6PAI5 102 aa2.53□□□□□ -2.01
Lig4-202ENSMUST00000170033 Krtap19-9bQ99NG9 58 aa2.52□□□□□ -2.01
Lig4-202ENSMUST00000170033 Rnf213E9Q555 5152 aaKnown RBP2.49□□□□□ -2.01
Lig4-202ENSMUST00000170033 Lce1gQ9D195 139 aa2.48□□□□□ -2.01
Lig4-202ENSMUST00000170033 Gm38119A0A0A6YX29 146 aa2.47□□□□□ -2.01
Lig4-202ENSMUST00000170033 Gm10318A0A1W2P728 225 aa2.46□□□□□ -2.02
Lig4-202ENSMUST00000170033 Gm11562A0PK51 136 aa2.44□□□□□ -2.02
Lig4-202ENSMUST00000170033 Lce1eQ9D139 143 aa2.43□□□□□ -2.02
Lig4-202ENSMUST00000170033 Lce1dQ9D731 133 aa2.42□□□□□ -2.02
Lig4-202ENSMUST00000170033 ZanO88799 5376 aa2.42□□□□□ -2.02
Lig4-202ENSMUST00000170033 Krtap19-2Q925I0 141 aa2.42□□□□□ -2.02
Lig4-202ENSMUST00000170033 Fat4Q2PZL6 4981 aa2.4□□□□□ -2.02
Lig4-202ENSMUST00000170033 SspoQ8CG65 4998 aa2.4□□□□□ -2.03
Lig4-202ENSMUST00000170033 Lce1iQ9D6P5 149 aa2.38□□□□□ -2.03
Lig4-202ENSMUST00000170033 Krtap9-5A2A5X3 358 aa2.36□□□□□ -2.03
Lig4-202ENSMUST00000170033 Lce1a2Q9D1K4 149 aa2.35□□□□□ -2.03
Lig4-202ENSMUST00000170033 Krtap9-3Q3V2C1 136 aa2.33□□□□□ -2.04
Lig4-202ENSMUST00000170033 Gm10272F7CZ33 110 aa2.29□□□□□ -2.04
Lig4-202ENSMUST00000170033 Gm11559Q9D3H7 191 aa2.29□□□□□ -2.04
Lig4-202ENSMUST00000170033 Gm10061D3Z714 54 aa2.26□□□□□ -2.05
Lig4-202ENSMUST00000170033 2300003K06RikA2A4M0 262 aa2.26□□□□□ -2.05
Lig4-202ENSMUST00000170033 Sprr2gO70558 76 aa2.26□□□□□ -2.05
Lig4-202ENSMUST00000170033 Mt2P02798 61 aa2.26□□□□□ -2.05
Retrieved 100 of 22,080 RNA–protein pairs in 66.1 ms