RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 Abca13Q5SSE9 5034 aa7.41□□□□□ -1.22
Tpm1-209ENSMUST00000113690 Ndufaf8A2AMZ4 74 aa7.37□□□□□ -1.23
Tpm1-209ENSMUST00000113690 Dnah8Q91XQ0 4731 aa7.34□□□□□ -1.23
Tpm1-209ENSMUST00000113690 Ryr1E9PZQ0 5035 aa7.32□□□□□ -1.24
Tpm1-209ENSMUST00000113690 Gm17416Q30KP4 66 aa7.26□□□□□ -1.25
Tpm1-209ENSMUST00000113690 Gm19426M0QWC7 77 aa7.25□□□□□ -1.25
Tpm1-209ENSMUST00000113690 Ryr2E9Q401 4966 aaKnown RBP7.24□□□□□ -1.25
Tpm1-209ENSMUST00000113690 2210017I01RikA0A0A6YVV1 95 aa7.2□□□□□ -1.26
Tpm1-209ENSMUST00000113690 B930094E09RikQ8C4T2 136 aa7.19□□□□□ -1.26
Tpm1-209ENSMUST00000113690 2310057N15RikQ9D6T8 200 aa7.19□□□□□ -1.26
Tpm1-209ENSMUST00000113690 Krtap13-1Q8K198 168 aa7.08□□□□□ -1.28
Tpm1-209ENSMUST00000113690 BC029722A0A0N4SW31 51 aa7.07□□□□□ -1.28
Tpm1-209ENSMUST00000113690 Gm19402J3QJV4 266 aa7.06□□□□□ -1.28
Tpm1-209ENSMUST00000113690 Krtap7-1Q9D3I6 87 aa7.03□□□□□ -1.28
Tpm1-209ENSMUST00000113690 HydinQ80W93 5154 aa6.98□□□□□ -1.29
Tpm1-209ENSMUST00000113690 Lrp2A2ARV4 4660 aa6.97□□□□□ -1.29
Tpm1-209ENSMUST00000113690 Kiaa1109A2AAE1 5005 aa6.96□□□□□ -1.29
Tpm1-209ENSMUST00000113690 Gm19668J3QMD1 248 aa6.96□□□□□ -1.29
Tpm1-209ENSMUST00000113690 Gm10318A0A1W2P728 225 aa6.95□□□□□ -1.3
Tpm1-209ENSMUST00000113690 Herc2Q4U2R1 4836 aa6.87□□□□□ -1.31
Tpm1-209ENSMUST00000113690 Gm9112A2AI92 75 aa6.85□□□□□ -1.31
Tpm1-209ENSMUST00000113690 PcloQ9QYX7 5068 aa6.84□□□□□ -1.31
Tpm1-209ENSMUST00000113690 Crct1Q6PAI5 102 aa6.84□□□□□ -1.31
Tpm1-209ENSMUST00000113690 Spink7Q6IE32 76 aa6.81□□□□□ -1.32
Tpm1-209ENSMUST00000113690 Fam229aB2KGE5 128 aa6.8□□□□□ -1.32
Tpm1-209ENSMUST00000113690 Dnhd1D3Z2X2 4750 aa6.79□□□□□ -1.32
Tpm1-209ENSMUST00000113690 Krtap1-5A2A590 122 aa6.78□□□□□ -1.32
Tpm1-209ENSMUST00000113690 Gm17402F6Z0L5 76 aa6.77□□□□□ -1.33
Tpm1-209ENSMUST00000113690 Sprr2a3Q4KL71 83 aa6.71□□□□□ -1.33
Tpm1-209ENSMUST00000113690 Sprr2a1Q9CQK8 83 aa6.71□□□□□ -1.33
Tpm1-209ENSMUST00000113690 Krtap17-1A2A5X6 109 aa6.71□□□□□ -1.34
Tpm1-209ENSMUST00000113690 Sec61bQ9CQS8 96 aaKnown RBP6.69□□□□□ -1.34
Tpm1-209ENSMUST00000113690 Gm40193A0A1B0GT39 78 aa6.67□□□□□ -1.34
Tpm1-209ENSMUST00000113690 Birc6O88738 4882 aa6.64□□□□□ -1.35
Tpm1-209ENSMUST00000113690 Krtap16-3Q8C1I6 86 aa6.63□□□□□ -1.35
Tpm1-209ENSMUST00000113690 Camk2n1Q6QWF9 78 aa6.54□□□□□ -1.36
Tpm1-209ENSMUST00000113690 Herc1E9PZP8 4859 aa6.51□□□□□ -1.37
Tpm1-209ENSMUST00000113690 Krtap19-1Q925H2 87 aa6.48□□□□□ -1.37
Tpm1-209ENSMUST00000113690 Krtap19-3Q925H6 87 aa6.45□□□□□ -1.38
Tpm1-209ENSMUST00000113690 Ubr4A2AN08 5180 aa6.44□□□□□ -1.38
Tpm1-209ENSMUST00000113690 Krtap1-4Q3V2D6 188 aa6.39□□□□□ -1.39
Tpm1-209ENSMUST00000113690 ZanO88799 5376 aa6.34□□□□□ -1.39
Tpm1-209ENSMUST00000113690 Fat4Q2PZL6 4981 aa6.32□□□□□ -1.4
Tpm1-209ENSMUST00000113690 4932415D10RikA0A1W2P6U8 4986 aa6.27□□□□□ -1.41
Tpm1-209ENSMUST00000113690 Lce1jD3YUU5 139 aa6.26□□□□□ -1.41
Tpm1-209ENSMUST00000113690 Tnp1P10856 55 aa6.15□□□□□ -1.43
Tpm1-209ENSMUST00000113690 Ush2AQ2QI47 5193 aa6.14□□□□□ -1.43
Tpm1-209ENSMUST00000113690 Lce1mQ9CR91 182 aa6.14□□□□□ -1.43
Tpm1-209ENSMUST00000113690 Krtap12-1Q9Z287 130 aa6.06□□□□□ -1.44
Tpm1-209ENSMUST00000113690 Gm18596A0A1W2P860 280 aa6.05□□□□□ -1.44
Tpm1-209ENSMUST00000113690 LorP18165 486 aa6.04□□□□□ -1.44
Tpm1-209ENSMUST00000113690 Hmcn2A2AJ76 5100 aa6.04□□□□□ -1.44
Tpm1-209ENSMUST00000113690 Krtap1-3A2A588 173 aa6.04□□□□□ -1.44
Tpm1-209ENSMUST00000113690 Krtap19-9aF8WH65 55 aa6.03□□□□□ -1.44
Tpm1-209ENSMUST00000113690 Rnf213E9Q555 5152 aaKnown RBP5.97□□□□□ -1.45
Tpm1-209ENSMUST00000113690 Lce1iQ9D6P5 149 aa5.84□□□□□ -1.47
Tpm1-209ENSMUST00000113690 Krtap8-1O08633 61 aa5.83□□□□□ -1.48
Tpm1-209ENSMUST00000113690 Krtap9-3Q3V2C1 136 aa5.83□□□□□ -1.48
Tpm1-209ENSMUST00000113690 Lce1a2Q9D1K4 149 aa5.83□□□□□ -1.48
Tpm1-209ENSMUST00000113690 2310046K23RikA0A0A6YVW6 87 aa5.76□□□□□ -1.49
Tpm1-209ENSMUST00000113690 Krtap19-9bQ99NG9 58 aa5.75□□□□□ -1.49
Tpm1-209ENSMUST00000113690 Lce1hQ9D6R3 140 aa5.72□□□□□ -1.49
Tpm1-209ENSMUST00000113690 Krtap9-5A2A5X3 358 aa5.68□□□□□ -1.5
Tpm1-209ENSMUST00000113690 Gm9789Q8BIG3 52 aa5.67□□□□□ -1.5
Tpm1-209ENSMUST00000113690 Krtap19-2Q925I0 141 aa5.67□□□□□ -1.5
Tpm1-209ENSMUST00000113690 Gm7735D3YX18 52 aa5.63□□□□□ -1.51
Tpm1-209ENSMUST00000113690 Prm1P02319 51 aa5.57□□□□□ -1.52
Tpm1-209ENSMUST00000113690 Lce1dQ9D731 133 aa5.51□□□□□ -1.53
Tpm1-209ENSMUST00000113690 SspoQ8CG65 4998 aa5.48□□□□□ -1.53
Tpm1-209ENSMUST00000113690 Gm11562A0PK51 136 aa5.45□□□□□ -1.54
Tpm1-209ENSMUST00000113690 Mt2P02798 61 aa5.37□□□□□ -1.55
Tpm1-209ENSMUST00000113690 Gm6358A0A087WPH4 74 aa5.3□□□□□ -1.56
Tpm1-209ENSMUST00000113690 Lce1eQ9D139 143 aa5.3□□□□□ -1.56
Tpm1-209ENSMUST00000113690 Muc5bE9Q5I3 4800 aa5.22□□□□□ -1.57
Tpm1-209ENSMUST00000113690 Sprr2gO70558 76 aa5.18□□□□□ -1.58
Tpm1-209ENSMUST00000113690 Gm10061D3Z714 54 aa5.16□□□□□ -1.58
Tpm1-209ENSMUST00000113690 Gm11938Q9D3H4 131 aa5.16□□□□□ -1.58
Tpm1-209ENSMUST00000113690 Gm10272F7CZ33 110 aa5.14□□□□□ -1.59
Tpm1-209ENSMUST00000113690 4933428G20RikQ9D3X4 101 aa5.11□□□□□ -1.59
Tpm1-209ENSMUST00000113690 Mdn1A2ANY6 5589 aaKnown RBP5.11□□□□□ -1.59
Tpm1-209ENSMUST00000113690 Lce1cQ9D1C5 147 aa5.05□□□□□ -1.6
Tpm1-209ENSMUST00000113690 Sprr2dO70555 85 aa5.02□□□□□ -1.61
Tpm1-209ENSMUST00000113690 Gm11569B1AQB1 180 aa4.98□□□□□ -1.61
Tpm1-209ENSMUST00000113690 Krtap22-2J3QNX6 67 aa4.98□□□□□ -1.61
Tpm1-209ENSMUST00000113690 Lce1fB9EJP6 147 aa4.86□□□□□ -1.63
Tpm1-209ENSMUST00000113690 Lce1a1Q9CQH5 143 aa4.86□□□□□ -1.63
Tpm1-209ENSMUST00000113690 Krtap31-1Q9D644 177 aa4.85□□□□□ -1.63
Tpm1-209ENSMUST00000113690 A0A1Y7VJH8 109 aa4.83□□□□□ -1.64
Tpm1-209ENSMUST00000113690 Gm10100J3QK64 120 aa4.83□□□□□ -1.64
Tpm1-209ENSMUST00000113690 Lce3bQ9CQM7 98 aa4.79□□□□□ -1.64
Tpm1-209ENSMUST00000113690 Syne1Q6ZWR6 8799 aa4.76□□□□□ -1.65
Tpm1-209ENSMUST00000113690 Gm10142J3KMP7 120 aa4.72□□□□□ -1.65
Tpm1-209ENSMUST00000113690 Krtap4-6Q3V4B7 195 aa4.65□□□□□ -1.66
Tpm1-209ENSMUST00000113690 Krtap19-4Q925H7 84 aa4.65□□□□□ -1.66
Tpm1-209ENSMUST00000113690 Fsip2A2ARZ3 6995 aa4.65□□□□□ -1.67
Tpm1-209ENSMUST00000113690 Syne2Q6ZWQ0 6874 aaKnown RBP4.63□□□□□ -1.67
Tpm1-209ENSMUST00000113690 Krtap28-10A0A1Y7VP58 119 aa4.63□□□□□ -1.67
Tpm1-209ENSMUST00000113690 Krtap4-2B1AQ85 167 aa4.63□□□□□ -1.67
Tpm1-209ENSMUST00000113690 Lce3cQ91V05 98 aa4.62□□□□□ -1.67
Tpm1-209ENSMUST00000113690 Lce3dE9Q8V1 98 aa4.58□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 86.4 ms