RNA–Protein interactions for RNA: ENSMUST00000113251.9

Trem1-202, Transcript of Triggering receptor expressed on myeloid cells 1, mousemouse

TSL 1 (best) BASIC

Gene Trem1, Length 2,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1-202ENSMUST00000113251 Defb1P56386 69 aa7.45□□□□□ -1.22
Trem1-202ENSMUST00000113251 Gm12216A0A1W2P827 62 aa7.45□□□□□ -1.22
Trem1-202ENSMUST00000113251 Prm1P02319 51 aa7.42□□□□□ -1.22
Trem1-202ENSMUST00000113251 Cox6b2Q80ZN9 88 aa7.38□□□□□ -1.23
Trem1-202ENSMUST00000113251 Ush2AQ2QI47 5193 aa7.37□□□□□ -1.23
Trem1-202ENSMUST00000113251 Gm9789Q8BIG3 52 aa7.37□□□□□ -1.23
Trem1-202ENSMUST00000113251 Gm7735D3YX18 52 aa7.34□□□□□ -1.23
Trem1-202ENSMUST00000113251 2310057N15RikQ9D6T8 200 aa7.34□□□□□ -1.23
Trem1-202ENSMUST00000113251 Gm17416Q30KP4 66 aa7.33□□□□□ -1.24
Trem1-202ENSMUST00000113251 Gm20537G3UYK7 97 aa7.28□□□□□ -1.24
Trem1-202ENSMUST00000113251 Hmcn2A2AJ76 5100 aa7.27□□□□□ -1.25
Trem1-202ENSMUST00000113251 Gm9955Q8CEJ8 102 aa7.21□□□□□ -1.26
Trem1-202ENSMUST00000113251 Ubr4A2AN08 5180 aa7.14□□□□□ -1.27
Trem1-202ENSMUST00000113251 Fam229aB2KGE5 128 aa7.13□□□□□ -1.27
Trem1-202ENSMUST00000113251 Gm3880A0A1B0GSB3 72 aa7.12□□□□□ -1.27
Trem1-202ENSMUST00000113251 Gm20538F6Z9R1 75 aa7.12□□□□□ -1.27
Trem1-202ENSMUST00000113251 Crct1Q6PAI5 102 aa7.09□□□□□ -1.27
Trem1-202ENSMUST00000113251 Krtap1-3A2A588 173 aa7.08□□□□□ -1.28
Trem1-202ENSMUST00000113251 Krtap16-3Q8C1I6 86 aa7.08□□□□□ -1.28
Trem1-202ENSMUST00000113251 4932415D10RikA0A1W2P6U8 4986 aa7.07□□□□□ -1.28
Trem1-202ENSMUST00000113251 2210017I01RikA0A0A6YVV1 95 aa7.07□□□□□ -1.28
Trem1-202ENSMUST00000113251 Mp68P56379 58 aa7.07□□□□□ -1.28
Trem1-202ENSMUST00000113251 Romo1P60603 79 aa7.07□□□□□ -1.28
Trem1-202ENSMUST00000113251 Gm17606F6ZL36 78 aa7.05□□□□□ -1.28
Trem1-202ENSMUST00000113251 Krtap19-1Q925H2 87 aa7.05□□□□□ -1.28
Trem1-202ENSMUST00000113251 Krtap19-3Q925H6 87 aa7.03□□□□□ -1.28
Trem1-202ENSMUST00000113251 Krtap13-1Q8K198 168 aa7□□□□□ -1.29
Trem1-202ENSMUST00000113251 CriptO70333 101 aa6.99□□□□□ -1.29
Trem1-202ENSMUST00000113251 ZanO88799 5376 aa6.97□□□□□ -1.29
Trem1-202ENSMUST00000113251 Gm10382Q3V0T5 144 aa6.96□□□□□ -1.3
Trem1-202ENSMUST00000113251 Krtap1-5A2A590 122 aa6.92□□□□□ -1.3
Trem1-202ENSMUST00000113251 Gm19402J3QJV4 266 aa6.91□□□□□ -1.3
Trem1-202ENSMUST00000113251 Gm10318A0A1W2P728 225 aa6.89□□□□□ -1.31
Trem1-202ENSMUST00000113251 LorP18165 486 aa6.89□□□□□ -1.31
Trem1-202ENSMUST00000113251 Krtap3-1A2A591 98 aa6.88□□□□□ -1.31
Trem1-202ENSMUST00000113251 Krtap1-4Q3V2D6 188 aa6.85□□□□□ -1.31
Trem1-202ENSMUST00000113251 Fat4Q2PZL6 4981 aa6.84□□□□□ -1.31
Trem1-202ENSMUST00000113251 Rnf213E9Q555 5152 aaKnown RBP6.84□□□□□ -1.31
Trem1-202ENSMUST00000113251 BC029722A0A0N4SW31 51 aa6.7□□□□□ -1.34
Trem1-202ENSMUST00000113251 Gm17402F6Z0L5 76 aa6.69□□□□□ -1.34
Trem1-202ENSMUST00000113251 Gm19426M0QWC7 77 aa6.68□□□□□ -1.34
Trem1-202ENSMUST00000113251 Prm2P07978 107 aa6.66□□□□□ -1.34
Trem1-202ENSMUST00000113251 B930094E09RikQ8C4T2 136 aa6.65□□□□□ -1.34
Trem1-202ENSMUST00000113251 Gm21887J3QQ04 176 aa6.56□□□□□ -1.36
Trem1-202ENSMUST00000113251 Gm10061D3Z714 54 aa6.56□□□□□ -1.36
Trem1-202ENSMUST00000113251 Ndufaf8A2AMZ4 74 aa6.54□□□□□ -1.36
Trem1-202ENSMUST00000113251 SspoQ8CG65 4998 aa6.54□□□□□ -1.36
Trem1-202ENSMUST00000113251 Gm40193A0A1B0GT39 78 aa6.53□□□□□ -1.36
Trem1-202ENSMUST00000113251 Spink7Q6IE32 76 aa6.43□□□□□ -1.38
Trem1-202ENSMUST00000113251 Krtap7-1Q9D3I6 87 aa6.43□□□□□ -1.38
Trem1-202ENSMUST00000113251 Krtap12-1Q9Z287 130 aa6.4□□□□□ -1.38
Trem1-202ENSMUST00000113251 Lce1jD3YUU5 139 aa6.35□□□□□ -1.39
Trem1-202ENSMUST00000113251 Krtap19-9aF8WH65 55 aa6.32□□□□□ -1.4
Trem1-202ENSMUST00000113251 Sprr2a3Q4KL71 83 aa6.32□□□□□ -1.4
Trem1-202ENSMUST00000113251 Sprr2a1Q9CQK8 83 aa6.32□□□□□ -1.4
Trem1-202ENSMUST00000113251 Krtap19-2Q925I0 141 aa6.29□□□□□ -1.4
Trem1-202ENSMUST00000113251 Gm11569B1AQB1 180 aa6.29□□□□□ -1.4
Trem1-202ENSMUST00000113251 Krtap9-5A2A5X3 358 aa6.26□□□□□ -1.41
Trem1-202ENSMUST00000113251 Gm19668J3QMD1 248 aa6.22□□□□□ -1.41
Trem1-202ENSMUST00000113251 Krtap17-1A2A5X6 109 aa6.12□□□□□ -1.43
Trem1-202ENSMUST00000113251 Muc5bE9Q5I3 4800 aa6.07□□□□□ -1.44
Trem1-202ENSMUST00000113251 Gm9112A2AI92 75 aa6.03□□□□□ -1.44
Trem1-202ENSMUST00000113251 Camk2n1Q6QWF9 78 aa5.97□□□□□ -1.45
Trem1-202ENSMUST00000113251 Gm6358A0A087WPH4 74 aa5.97□□□□□ -1.45
Trem1-202ENSMUST00000113251 Lce1iQ9D6P5 149 aa5.96□□□□□ -1.46
Trem1-202ENSMUST00000113251 Krtap4-2B1AQ85 167 aa5.91□□□□□ -1.46
Trem1-202ENSMUST00000113251 Gm11562A0PK51 136 aa5.9□□□□□ -1.46
Trem1-202ENSMUST00000113251 Lce1gQ9D195 139 aa5.9□□□□□ -1.47
Trem1-202ENSMUST00000113251 Lce1a2Q9D1K4 149 aa5.87□□□□□ -1.47
Trem1-202ENSMUST00000113251 Gm11555B1AQ89 175 aa5.84□□□□□ -1.47
Trem1-202ENSMUST00000113251 Tnp1P10856 55 aa5.8□□□□□ -1.48
Trem1-202ENSMUST00000113251 Mt2P02798 61 aa5.78□□□□□ -1.48
Trem1-202ENSMUST00000113251 Krtap4-6Q3V4B7 195 aa5.73□□□□□ -1.49
Trem1-202ENSMUST00000113251 Gm11596B1AQB0 205 aa5.69□□□□□ -1.5
Trem1-202ENSMUST00000113251 Mdn1A2ANY6 5589 aaKnown RBP5.67□□□□□ -1.5
Trem1-202ENSMUST00000113251 Krtap8-1O08633 61 aa5.66□□□□□ -1.5
Trem1-202ENSMUST00000113251 Syne2Q6ZWQ0 6874 aaKnown RBP5.66□□□□□ -1.5
Trem1-202ENSMUST00000113251 Krtap19-9bQ99NG9 58 aa5.64□□□□□ -1.51
Trem1-202ENSMUST00000113251 Krtap4-1Q3UUY3 169 aa5.62□□□□□ -1.51
Trem1-202ENSMUST00000113251 2310046K23RikA0A0A6YVW6 87 aa5.57□□□□□ -1.52
Trem1-202ENSMUST00000113251 Krtap22-2J3QNX6 67 aa5.51□□□□□ -1.53
Trem1-202ENSMUST00000113251 Gm11564A2A4L9 201 aa5.47□□□□□ -1.53
Trem1-202ENSMUST00000113251 Gm11563B1AQ90 168 aa5.47□□□□□ -1.53
Trem1-202ENSMUST00000113251 Gm11595B1AQA7 289 aa5.47□□□□□ -1.53
Trem1-202ENSMUST00000113251 Krtap4-8B1AQA8 209 aa5.47□□□□□ -1.53
Trem1-202ENSMUST00000113251 Krtap9-3Q3V2C1 136 aa5.43□□□□□ -1.54
Trem1-202ENSMUST00000113251 A0A1Y7VJH8 109 aa5.38□□□□□ -1.55
Trem1-202ENSMUST00000113251 Krtap4-9B1AQA9 244 aa5.33□□□□□ -1.56
Trem1-202ENSMUST00000113251 Mt4P47945 62 aa5.3□□□□□ -1.56
Trem1-202ENSMUST00000113251 Lce1bQ9D149 137 aa5.23□□□□□ -1.57
Trem1-202ENSMUST00000113251 Lce1hQ9D6R3 140 aa5.15□□□□□ -1.59
Trem1-202ENSMUST00000113251 Fsip2A2ARZ3 6995 aa5.14□□□□□ -1.59
Trem1-202ENSMUST00000113251 Krtap28-10A0A1Y7VP58 119 aa5.12□□□□□ -1.59
Trem1-202ENSMUST00000113251 Krtap4-13Q9D7P3 165 aa5.12□□□□□ -1.59
Trem1-202ENSMUST00000113251 Gm38119A0A0A6YX29 146 aa5.09□□□□□ -1.59
Trem1-202ENSMUST00000113251 Sprr2kO70562 68 aa5.08□□□□□ -1.6
Trem1-202ENSMUST00000113251 2300003K06RikA2A4M0 262 aa5.02□□□□□ -1.61
Trem1-202ENSMUST00000113251 Krtap6-3A0A087WQL6 57 aa5□□□□□ -1.61
Trem1-202ENSMUST00000113251 Gm7544A0A1Y7VJ58 118 aa4.96□□□□□ -1.62
Trem1-202ENSMUST00000113251 A0A1Y7VLE6 161 aa4.94□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 67.5 ms