RNA–Protein interactions for RNA: ENSMUST00000111390.7

Scarb1-202, Transcript of Scavenger receptor class B member 1, mousemouse

TSL 1 (best) BASIC

Gene Scarb1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1-202ENSMUST00000111390 Gm9955Q8CEJ8 102 aa10.88□□□□□ -0.67
Scarb1-202ENSMUST00000111390 PcloQ9QYX7 5068 aa10.87□□□□□ -0.67
Scarb1-202ENSMUST00000111390 Romo1P60603 79 aa10.87□□□□□ -0.67
Scarb1-202ENSMUST00000111390 Gm20538F6Z9R1 75 aa10.84□□□□□ -0.67
Scarb1-202ENSMUST00000111390 Gm17416Q30KP4 66 aa10.84□□□□□ -0.67
Scarb1-202ENSMUST00000111390 Mp68P56379 58 aa10.81□□□□□ -0.68
Scarb1-202ENSMUST00000111390 CriptO70333 101 aa10.72□□□□□ -0.69
Scarb1-202ENSMUST00000111390 Gm10382Q3V0T5 144 aa10.66□□□□□ -0.7
Scarb1-202ENSMUST00000111390 Gm17606F6ZL36 78 aa10.63□□□□□ -0.71
Scarb1-202ENSMUST00000111390 Sec61bQ9CQS8 96 aaKnown RBP10.63□□□□□ -0.71
Scarb1-202ENSMUST00000111390 2310057N15RikQ9D6T8 200 aa10.61□□□□□ -0.71
Scarb1-202ENSMUST00000111390 2210017I01RikA0A0A6YVV1 95 aa10.55□□□□□ -0.72
Scarb1-202ENSMUST00000111390 Lce1mQ9CR91 182 aa10.53□□□□□ -0.72
Scarb1-202ENSMUST00000111390 Herc1E9PZP8 4859 aa10.52□□□□□ -0.73
Scarb1-202ENSMUST00000111390 Krtap3-1A2A591 98 aa10.51□□□□□ -0.73
Scarb1-202ENSMUST00000111390 Krtap13-1Q8K198 168 aa10.38□□□□□ -0.75
Scarb1-202ENSMUST00000111390 Fam229aB2KGE5 128 aa10.22□□□□□ -0.77
Scarb1-202ENSMUST00000111390 Gm21887J3QQ04 176 aa10.22□□□□□ -0.77
Scarb1-202ENSMUST00000111390 Krtap16-3Q8C1I6 86 aa10.21□□□□□ -0.77
Scarb1-202ENSMUST00000111390 Crct1Q6PAI5 102 aa10.18□□□□□ -0.78
Scarb1-202ENSMUST00000111390 Krtap1-5A2A590 122 aa10.17□□□□□ -0.78
Scarb1-202ENSMUST00000111390 Ush2AQ2QI47 5193 aa10.13□□□□□ -0.79
Scarb1-202ENSMUST00000111390 Gm10318A0A1W2P728 225 aa10.12□□□□□ -0.79
Scarb1-202ENSMUST00000111390 BC029722A0A0N4SW31 51 aa10.11□□□□□ -0.79
Scarb1-202ENSMUST00000111390 Gm19426M0QWC7 77 aa10.11□□□□□ -0.79
Scarb1-202ENSMUST00000111390 Krtap19-1Q925H2 87 aa10.1□□□□□ -0.79
Scarb1-202ENSMUST00000111390 Gm18596A0A1W2P860 280 aa10.08□□□□□ -0.8
Scarb1-202ENSMUST00000111390 B930094E09RikQ8C4T2 136 aa10.07□□□□□ -0.8
Scarb1-202ENSMUST00000111390 Krtap19-3Q925H6 87 aa10.06□□□□□ -0.8
Scarb1-202ENSMUST00000111390 Hmcn2A2AJ76 5100 aa10.05□□□□□ -0.8
Scarb1-202ENSMUST00000111390 Ndufaf8A2AMZ4 74 aa9.97□□□□□ -0.81
Scarb1-202ENSMUST00000111390 Ubr4A2AN08 5180 aa9.97□□□□□ -0.81
Scarb1-202ENSMUST00000111390 Gm9789Q8BIG3 52 aa9.92□□□□□ -0.82
Scarb1-202ENSMUST00000111390 Krtap1-3A2A588 173 aa9.91□□□□□ -0.82
Scarb1-202ENSMUST00000111390 Krtap7-1Q9D3I6 87 aa9.91□□□□□ -0.82
Scarb1-202ENSMUST00000111390 ZanO88799 5376 aa9.86□□□□□ -0.83
Scarb1-202ENSMUST00000111390 Gm19402J3QJV4 266 aa9.86□□□□□ -0.83
Scarb1-202ENSMUST00000111390 Prm1P02319 51 aa9.85□□□□□ -0.83
Scarb1-202ENSMUST00000111390 4932415D10RikA0A1W2P6U8 4986 aa9.82□□□□□ -0.84
Scarb1-202ENSMUST00000111390 Gm17402F6Z0L5 76 aa9.8□□□□□ -0.84
Scarb1-202ENSMUST00000111390 Prm2P07978 107 aa9.79□□□□□ -0.84
Scarb1-202ENSMUST00000111390 Gm7735D3YX18 52 aa9.78□□□□□ -0.84
Scarb1-202ENSMUST00000111390 Gm40193A0A1B0GT39 78 aa9.75□□□□□ -0.85
Scarb1-202ENSMUST00000111390 LorP18165 486 aa9.66□□□□□ -0.86
Scarb1-202ENSMUST00000111390 Spink7Q6IE32 76 aa9.64□□□□□ -0.87
Scarb1-202ENSMUST00000111390 Krtap1-4Q3V2D6 188 aa9.59□□□□□ -0.87
Scarb1-202ENSMUST00000111390 Fat4Q2PZL6 4981 aa9.53□□□□□ -0.88
Scarb1-202ENSMUST00000111390 Rnf213E9Q555 5152 aaKnown RBP9.5□□□□□ -0.89
Scarb1-202ENSMUST00000111390 Sprr2a3Q4KL71 83 aa9.5□□□□□ -0.89
Scarb1-202ENSMUST00000111390 Sprr2a1Q9CQK8 83 aa9.5□□□□□ -0.89
Scarb1-202ENSMUST00000111390 Gm19668J3QMD1 248 aa9.46□□□□□ -0.9
Scarb1-202ENSMUST00000111390 Lce1jD3YUU5 139 aa9.31□□□□□ -0.92
Scarb1-202ENSMUST00000111390 Krtap12-1Q9Z287 130 aa9.27□□□□□ -0.93
Scarb1-202ENSMUST00000111390 Krtap19-9aF8WH65 55 aa9.19□□□□□ -0.94
Scarb1-202ENSMUST00000111390 Gm9112A2AI92 75 aa9.14□□□□□ -0.95
Scarb1-202ENSMUST00000111390 SspoQ8CG65 4998 aa9.14□□□□□ -0.95
Scarb1-202ENSMUST00000111390 Camk2n1Q6QWF9 78 aa9.05□□□□□ -0.96
Scarb1-202ENSMUST00000111390 Krtap17-1A2A5X6 109 aa8.99□□□□□ -0.97
Scarb1-202ENSMUST00000111390 Krtap19-2Q925I0 141 aa8.94□□□□□ -0.98
Scarb1-202ENSMUST00000111390 Krtap9-5A2A5X3 358 aa8.91□□□□□ -0.98
Scarb1-202ENSMUST00000111390 Gm10061D3Z714 54 aa8.91□□□□□ -0.98
Scarb1-202ENSMUST00000111390 Lce1iQ9D6P5 149 aa8.74□□□□□ -1.01
Scarb1-202ENSMUST00000111390 Tnp1P10856 55 aa8.71□□□□□ -1.01
Scarb1-202ENSMUST00000111390 Lce1a2Q9D1K4 149 aa8.64□□□□□ -1.03
Scarb1-202ENSMUST00000111390 Muc5bE9Q5I3 4800 aa8.56□□□□□ -1.04
Scarb1-202ENSMUST00000111390 Krtap8-1O08633 61 aa8.48□□□□□ -1.05
Scarb1-202ENSMUST00000111390 Gm6358A0A087WPH4 74 aa8.44□□□□□ -1.06
Scarb1-202ENSMUST00000111390 Gm11569B1AQB1 180 aa8.42□□□□□ -1.06
Scarb1-202ENSMUST00000111390 Krtap19-9bQ99NG9 58 aa8.41□□□□□ -1.06
Scarb1-202ENSMUST00000111390 2310046K23RikA0A0A6YVW6 87 aa8.3□□□□□ -1.08
Scarb1-202ENSMUST00000111390 Mt2P02798 61 aa8.29□□□□□ -1.08
Scarb1-202ENSMUST00000111390 Krtap9-3Q3V2C1 136 aa7.99□□□□□ -1.13
Scarb1-202ENSMUST00000111390 Mdn1A2ANY6 5589 aaKnown RBP7.97□□□□□ -1.13
Scarb1-202ENSMUST00000111390 Lce1hQ9D6R3 140 aa7.91□□□□□ -1.14
Scarb1-202ENSMUST00000111390 Krtap22-2J3QNX6 67 aa7.84□□□□□ -1.15
Scarb1-202ENSMUST00000111390 Krtap4-6Q3V4B7 195 aa7.68□□□□□ -1.18
Scarb1-202ENSMUST00000111390 Gm11555B1AQ89 175 aa7.67□□□□□ -1.18
Scarb1-202ENSMUST00000111390 Lce1gQ9D195 139 aa7.65□□□□□ -1.18
Scarb1-202ENSMUST00000111390 Krtap4-2B1AQ85 167 aa7.61□□□□□ -1.19
Scarb1-202ENSMUST00000111390 Krtap4-1Q3UUY3 169 aa7.52□□□□□ -1.21
Scarb1-202ENSMUST00000111390 Lce1dQ9D731 133 aa7.49□□□□□ -1.21
Scarb1-202ENSMUST00000111390 Gm11596B1AQB0 205 aa7.45□□□□□ -1.22
Scarb1-202ENSMUST00000111390 Syne2Q6ZWQ0 6874 aaKnown RBP7.4□□□□□ -1.23
Scarb1-202ENSMUST00000111390 Sprr2gO70558 76 aa7.39□□□□□ -1.23
Scarb1-202ENSMUST00000111390 4933428G20RikQ9D3X4 101 aa7.38□□□□□ -1.23
Scarb1-202ENSMUST00000111390 Gm10272F7CZ33 110 aa7.35□□□□□ -1.23
Scarb1-202ENSMUST00000111390 Gm11562A0PK51 136 aa7.29□□□□□ -1.24
Scarb1-202ENSMUST00000111390 Gm11564A2A4L9 201 aa7.29□□□□□ -1.24
Scarb1-202ENSMUST00000111390 Gm11563B1AQ90 168 aa7.29□□□□□ -1.24
Scarb1-202ENSMUST00000111390 Gm11595B1AQA7 289 aa7.29□□□□□ -1.24
Scarb1-202ENSMUST00000111390 Krtap4-8B1AQA8 209 aa7.29□□□□□ -1.24
Scarb1-202ENSMUST00000111390 Gm11938Q9D3H4 131 aa7.24□□□□□ -1.25
Scarb1-202ENSMUST00000111390 Lce1eQ9D139 143 aa7.23□□□□□ -1.25
Scarb1-202ENSMUST00000111390 Sprr2dO70555 85 aa7.22□□□□□ -1.25
Scarb1-202ENSMUST00000111390 Mt4P47945 62 aa7.18□□□□□ -1.26
Scarb1-202ENSMUST00000111390 Krtap4-9B1AQA9 244 aa7.12□□□□□ -1.27
Scarb1-202ENSMUST00000111390 Lce1bQ9D149 137 aa7.05□□□□□ -1.28
Scarb1-202ENSMUST00000111390 Fsip2A2ARZ3 6995 aa7.04□□□□□ -1.28
Scarb1-202ENSMUST00000111390 Gm38119A0A0A6YX29 146 aa7.02□□□□□ -1.29
Scarb1-202ENSMUST00000111390 Syne1Q6ZWR6 8799 aa6.95□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms