RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Gm3880A0A1B0GSB3 72 aa7.87□□□□□ -1.15
Vcan-201ENSMUST00000109543 Gm9955Q8CEJ8 102 aa7.86□□□□□ -1.15
Vcan-201ENSMUST00000109543 Krtap3-1A2A591 98 aa7.83□□□□□ -1.16
Vcan-201ENSMUST00000109543 2210017I01RikA0A0A6YVV1 95 aa7.77□□□□□ -1.17
Vcan-201ENSMUST00000109543 Lrp2A2ARV4 4660 aa7.73□□□□□ -1.17
Vcan-201ENSMUST00000109543 2310057N15RikQ9D6T8 200 aa7.66□□□□□ -1.18
Vcan-201ENSMUST00000109543 PcloQ9QYX7 5068 aa7.62□□□□□ -1.19
Vcan-201ENSMUST00000109543 Krtap13-1Q8K198 168 aa7.62□□□□□ -1.19
Vcan-201ENSMUST00000109543 Sec61bQ9CQS8 96 aaKnown RBP7.58□□□□□ -1.2
Vcan-201ENSMUST00000109543 Gm12216A0A1W2P827 62 aa7.5□□□□□ -1.21
Vcan-201ENSMUST00000109543 BC029722A0A0N4SW31 51 aa7.5□□□□□ -1.21
Vcan-201ENSMUST00000109543 CriptO70333 101 aa7.48□□□□□ -1.21
Vcan-201ENSMUST00000109543 Romo1P60603 79 aa7.46□□□□□ -1.21
Vcan-201ENSMUST00000109543 Krtap1-5A2A590 122 aa7.44□□□□□ -1.22
Vcan-201ENSMUST00000109543 B930094E09RikQ8C4T2 136 aa7.38□□□□□ -1.23
Vcan-201ENSMUST00000109543 Gm10318A0A1W2P728 225 aa7.36□□□□□ -1.23
Vcan-201ENSMUST00000109543 Crct1Q6PAI5 102 aa7.35□□□□□ -1.23
Vcan-201ENSMUST00000109543 Krtap16-3Q8C1I6 86 aa7.35□□□□□ -1.23
Vcan-201ENSMUST00000109543 Fam229aB2KGE5 128 aa7.33□□□□□ -1.24
Vcan-201ENSMUST00000109543 Gm19426M0QWC7 77 aa7.33□□□□□ -1.24
Vcan-201ENSMUST00000109543 Gm21887J3QQ04 176 aa7.3□□□□□ -1.24
Vcan-201ENSMUST00000109543 Herc1E9PZP8 4859 aa7.29□□□□□ -1.24
Vcan-201ENSMUST00000109543 Krtap19-1Q925H2 87 aa7.25□□□□□ -1.25
Vcan-201ENSMUST00000109543 Gm17402F6Z0L5 76 aa7.23□□□□□ -1.25
Vcan-201ENSMUST00000109543 Krtap19-3Q925H6 87 aa7.21□□□□□ -1.26
Vcan-201ENSMUST00000109543 Gm19402J3QJV4 266 aa7.18□□□□□ -1.26
Vcan-201ENSMUST00000109543 Lce1mQ9CR91 182 aa7.16□□□□□ -1.26
Vcan-201ENSMUST00000109543 Spink7Q6IE32 76 aa7.15□□□□□ -1.27
Vcan-201ENSMUST00000109543 Sprr2a3Q4KL71 83 aa7.1□□□□□ -1.27
Vcan-201ENSMUST00000109543 Sprr2a1Q9CQK8 83 aa7.1□□□□□ -1.27
Vcan-201ENSMUST00000109543 Ush2AQ2QI47 5193 aa7.06□□□□□ -1.28
Vcan-201ENSMUST00000109543 ZanO88799 5376 aa7.06□□□□□ -1.28
Vcan-201ENSMUST00000109543 Hmcn2A2AJ76 5100 aa7.04□□□□□ -1.28
Vcan-201ENSMUST00000109543 Ubr4A2AN08 5180 aa7.01□□□□□ -1.29
Vcan-201ENSMUST00000109543 Krtap1-4Q3V2D6 188 aa6.99□□□□□ -1.29
Vcan-201ENSMUST00000109543 4932415D10RikA0A1W2P6U8 4986 aa6.98□□□□□ -1.29
Vcan-201ENSMUST00000109543 Krtap1-3A2A588 173 aa6.95□□□□□ -1.3
Vcan-201ENSMUST00000109543 Krtap7-1Q9D3I6 87 aa6.87□□□□□ -1.31
Vcan-201ENSMUST00000109543 Fat4Q2PZL6 4981 aa6.83□□□□□ -1.32
Vcan-201ENSMUST00000109543 Gm20538F6Z9R1 75 aa6.83□□□□□ -1.32
Vcan-201ENSMUST00000109543 Gm18596A0A1W2P860 280 aa6.82□□□□□ -1.32
Vcan-201ENSMUST00000109543 LorP18165 486 aa6.82□□□□□ -1.32
Vcan-201ENSMUST00000109543 Mp68P56379 58 aa6.82□□□□□ -1.32
Vcan-201ENSMUST00000109543 Gm9789Q8BIG3 52 aa6.8□□□□□ -1.32
Vcan-201ENSMUST00000109543 Lce1jD3YUU5 139 aa6.77□□□□□ -1.33
Vcan-201ENSMUST00000109543 Camk2n1Q6QWF9 78 aa6.76□□□□□ -1.33
Vcan-201ENSMUST00000109543 Rnf213E9Q555 5152 aaKnown RBP6.72□□□□□ -1.33
Vcan-201ENSMUST00000109543 Gm40193A0A1B0GT39 78 aa6.7□□□□□ -1.34
Vcan-201ENSMUST00000109543 Krtap12-1Q9Z287 130 aa6.7□□□□□ -1.34
Vcan-201ENSMUST00000109543 Gm19668J3QMD1 248 aa6.69□□□□□ -1.34
Vcan-201ENSMUST00000109543 Prm1P02319 51 aa6.68□□□□□ -1.34
Vcan-201ENSMUST00000109543 Krtap19-9aF8WH65 55 aa6.66□□□□□ -1.34
Vcan-201ENSMUST00000109543 Gm7735D3YX18 52 aa6.65□□□□□ -1.34
Vcan-201ENSMUST00000109543 Prm2P07978 107 aa6.58□□□□□ -1.36
Vcan-201ENSMUST00000109543 Krtap17-1A2A5X6 109 aa6.51□□□□□ -1.37
Vcan-201ENSMUST00000109543 SspoQ8CG65 4998 aa6.46□□□□□ -1.38
Vcan-201ENSMUST00000109543 Ndufaf8A2AMZ4 74 aa6.41□□□□□ -1.38
Vcan-201ENSMUST00000109543 Krtap19-2Q925I0 141 aa6.38□□□□□ -1.39
Vcan-201ENSMUST00000109543 Krtap9-5A2A5X3 358 aa6.35□□□□□ -1.39
Vcan-201ENSMUST00000109543 Lce1iQ9D6P5 149 aa6.35□□□□□ -1.39
Vcan-201ENSMUST00000109543 Lce1a2Q9D1K4 149 aa6.3□□□□□ -1.4
Vcan-201ENSMUST00000109543 Tnp1P10856 55 aa6.28□□□□□ -1.4
Vcan-201ENSMUST00000109543 Krtap8-1O08633 61 aa6.27□□□□□ -1.41
Vcan-201ENSMUST00000109543 Krtap19-9bQ99NG9 58 aa6.19□□□□□ -1.42
Vcan-201ENSMUST00000109543 Gm10061D3Z714 54 aa6.14□□□□□ -1.43
Vcan-201ENSMUST00000109543 Muc5bE9Q5I3 4800 aa6.06□□□□□ -1.44
Vcan-201ENSMUST00000109543 Gm6358A0A087WPH4 74 aa5.99□□□□□ -1.45
Vcan-201ENSMUST00000109543 Krtap9-3Q3V2C1 136 aa5.99□□□□□ -1.45
Vcan-201ENSMUST00000109543 Mt2P02798 61 aa5.96□□□□□ -1.46
Vcan-201ENSMUST00000109543 2310046K23RikA0A0A6YVW6 87 aa5.94□□□□□ -1.46
Vcan-201ENSMUST00000109543 Lce1hQ9D6R3 140 aa5.92□□□□□ -1.46
Vcan-201ENSMUST00000109543 Krtap4-1Q3UUY3 169 aa5.81□□□□□ -1.48
Vcan-201ENSMUST00000109543 Gm9112A2AI92 75 aa5.77□□□□□ -1.49
Vcan-201ENSMUST00000109543 Gm11569B1AQB1 180 aa5.75□□□□□ -1.49
Vcan-201ENSMUST00000109543 A0A1Y7VJH8 109 aa5.7□□□□□ -1.5
Vcan-201ENSMUST00000109543 Krtap22-2J3QNX6 67 aa5.59□□□□□ -1.51
Vcan-201ENSMUST00000109543 Mdn1A2ANY6 5589 aaKnown RBP5.56□□□□□ -1.52
Vcan-201ENSMUST00000109543 Gm11555B1AQ89 175 aa5.48□□□□□ -1.53
Vcan-201ENSMUST00000109543 Krtap28-10A0A1Y7VP58 119 aa5.46□□□□□ -1.54
Vcan-201ENSMUST00000109543 Lce1dQ9D731 133 aa5.44□□□□□ -1.54
Vcan-201ENSMUST00000109543 Gm10272F7CZ33 110 aa5.43□□□□□ -1.54
Vcan-201ENSMUST00000109543 A0A1Y7VLE6 161 aa5.4□□□□□ -1.55
Vcan-201ENSMUST00000109543 Gm11563B1AQ90 168 aa5.37□□□□□ -1.55
Vcan-201ENSMUST00000109543 Krtap4-7Q9D732 168 aa5.37□□□□□ -1.55
Vcan-201ENSMUST00000109543 Krtap28-13A0A087WQP5 138 aa5.34□□□□□ -1.56
Vcan-201ENSMUST00000109543 Sprr2gO70558 76 aa5.34□□□□□ -1.56
Vcan-201ENSMUST00000109543 Lce1eQ9D139 143 aa5.28□□□□□ -1.56
Vcan-201ENSMUST00000109543 Sprr2dO70555 85 aa5.25□□□□□ -1.57
Vcan-201ENSMUST00000109543 Krtap4-6Q3V4B7 195 aa5.24□□□□□ -1.57
Vcan-201ENSMUST00000109543 A030005K14RikA0A1Y7VNY1 122 aa5.22□□□□□ -1.57
Vcan-201ENSMUST00000109543 Gm11938Q9D3H4 131 aa5.21□□□□□ -1.58
Vcan-201ENSMUST00000109543 Gm11562A0PK51 136 aa5.18□□□□□ -1.58
Vcan-201ENSMUST00000109543 4933428G20RikQ9D3X4 101 aa5.17□□□□□ -1.58
Vcan-201ENSMUST00000109543 Lce1gQ9D195 139 aa5.09□□□□□ -1.59
Vcan-201ENSMUST00000109543 Lce1cQ9D1C5 147 aa5.09□□□□□ -1.59
Vcan-201ENSMUST00000109543 Krtap4-2B1AQ85 167 aa5.03□□□□□ -1.6
Vcan-201ENSMUST00000109543 Syne1Q6ZWR6 8799 aa5□□□□□ -1.61
Vcan-201ENSMUST00000109543 A030005L19RikA0A1Y7VIU2 113 aa4.99□□□□□ -1.61
Vcan-201ENSMUST00000109543 Gm11596B1AQB0 205 aa4.99□□□□□ -1.61
Vcan-201ENSMUST00000109543 Krtap19-4Q925H7 84 aa4.97□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms