RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gm18596A0A1W2P860 280 aa9.6□□□□□ -0.87
Trim47-202ENSMUST00000106441 Gm9955Q8CEJ8 102 aa9.57□□□□□ -0.88
Trim47-202ENSMUST00000106441 Romo1P60603 79 aa9.56□□□□□ -0.88
Trim47-202ENSMUST00000106441 Gm20538F6Z9R1 75 aa9.55□□□□□ -0.88
Trim47-202ENSMUST00000106441 Mp68P56379 58 aa9.51□□□□□ -0.89
Trim47-202ENSMUST00000106441 Gm17606F6ZL36 78 aa9.45□□□□□ -0.9
Trim47-202ENSMUST00000106441 Rnase13Q5GAM7 153 aa9.44□□□□□ -0.9
Trim47-202ENSMUST00000106441 Krtap15-1Q9QZU5 150 aa9.43□□□□□ -0.9
Trim47-202ENSMUST00000106441 Gm10382Q3V0T5 144 aa9.38□□□□□ -0.91
Trim47-202ENSMUST00000106441 Rpl37Q9D823 97 aa9.37□□□□□ -0.91
Trim47-202ENSMUST00000106441 CriptO70333 101 aa9.33□□□□□ -0.92
Trim47-202ENSMUST00000106441 Ush2AQ2QI47 5193 aa9.29□□□□□ -0.92
Trim47-202ENSMUST00000106441 Gm17416Q30KP4 66 aa9.29□□□□□ -0.92
Trim47-202ENSMUST00000106441 Prm1P02319 51 aa9.26□□□□□ -0.93
Trim47-202ENSMUST00000106441 Gm9789Q8BIG3 52 aa9.22□□□□□ -0.93
Trim47-202ENSMUST00000106441 Gm7735D3YX18 52 aa9.2□□□□□ -0.94
Trim47-202ENSMUST00000106441 Krtap3-1A2A591 98 aa9.19□□□□□ -0.94
Trim47-202ENSMUST00000106441 Sec61bQ9CQS8 96 aaKnown RBP9.19□□□□□ -0.94
Trim47-202ENSMUST00000106441 2310057N15RikQ9D6T8 200 aa9.16□□□□□ -0.94
Trim47-202ENSMUST00000106441 Hmcn2A2AJ76 5100 aa9.16□□□□□ -0.94
Trim47-202ENSMUST00000106441 2210017I01RikA0A0A6YVV1 95 aa9.08□□□□□ -0.96
Trim47-202ENSMUST00000106441 Ubr4A2AN08 5180 aa9.07□□□□□ -0.96
Trim47-202ENSMUST00000106441 4932415D10RikA0A1W2P6U8 4986 aa8.97□□□□□ -0.97
Trim47-202ENSMUST00000106441 Gm21887J3QQ04 176 aa8.92□□□□□ -0.98
Trim47-202ENSMUST00000106441 Crct1Q6PAI5 102 aa8.91□□□□□ -0.98
Trim47-202ENSMUST00000106441 Gm19426M0QWC7 77 aa8.87□□□□□ -0.99
Trim47-202ENSMUST00000106441 Krtap1-3A2A588 173 aa8.85□□□□□ -0.99
Trim47-202ENSMUST00000106441 B930094E09RikQ8C4T2 136 aa8.85□□□□□ -0.99
Trim47-202ENSMUST00000106441 BC029722A0A0N4SW31 51 aa8.83□□□□□ -1
Trim47-202ENSMUST00000106441 Krtap16-3Q8C1I6 86 aa8.79□□□□□ -1
Trim47-202ENSMUST00000106441 Ndufaf8A2AMZ4 74 aa8.74□□□□□ -1.01
Trim47-202ENSMUST00000106441 Krtap19-1Q925H2 87 aa8.74□□□□□ -1.01
Trim47-202ENSMUST00000106441 Fam229aB2KGE5 128 aa8.73□□□□□ -1.01
Trim47-202ENSMUST00000106441 Gm17402F6Z0L5 76 aa8.73□□□□□ -1.01
Trim47-202ENSMUST00000106441 Krtap13-1Q8K198 168 aa8.73□□□□□ -1.01
Trim47-202ENSMUST00000106441 Krtap19-3Q925H6 87 aa8.72□□□□□ -1.01
Trim47-202ENSMUST00000106441 Krtap7-1Q9D3I6 87 aa8.7□□□□□ -1.02
Trim47-202ENSMUST00000106441 ZanO88799 5376 aa8.7□□□□□ -1.02
Trim47-202ENSMUST00000106441 Gm10318A0A1W2P728 225 aa8.69□□□□□ -1.02
Trim47-202ENSMUST00000106441 Gm40193A0A1B0GT39 78 aa8.65□□□□□ -1.03
Trim47-202ENSMUST00000106441 LorP18165 486 aa8.63□□□□□ -1.03
Trim47-202ENSMUST00000106441 Fat4Q2PZL6 4981 aa8.58□□□□□ -1.04
Trim47-202ENSMUST00000106441 Krtap1-5A2A590 122 aa8.58□□□□□ -1.04
Trim47-202ENSMUST00000106441 Prm2P07978 107 aa8.56□□□□□ -1.04
Trim47-202ENSMUST00000106441 Gm19402J3QJV4 266 aa8.55□□□□□ -1.04
Trim47-202ENSMUST00000106441 Rnf213E9Q555 5152 aaKnown RBP8.53□□□□□ -1.04
Trim47-202ENSMUST00000106441 Krtap1-4Q3V2D6 188 aa8.45□□□□□ -1.06
Trim47-202ENSMUST00000106441 Sprr2a3Q4KL71 83 aa8.39□□□□□ -1.07
Trim47-202ENSMUST00000106441 Sprr2a1Q9CQK8 83 aa8.39□□□□□ -1.07
Trim47-202ENSMUST00000106441 Spink7Q6IE32 76 aa8.27□□□□□ -1.09
Trim47-202ENSMUST00000106441 Gm19668J3QMD1 248 aa8.24□□□□□ -1.09
Trim47-202ENSMUST00000106441 Gm10061D3Z714 54 aa8.2□□□□□ -1.1
Trim47-202ENSMUST00000106441 SspoQ8CG65 4998 aa8.17□□□□□ -1.1
Trim47-202ENSMUST00000106441 Camk2n1Q6QWF9 78 aa8.04□□□□□ -1.12
Trim47-202ENSMUST00000106441 Gm9112A2AI92 75 aa8.03□□□□□ -1.12
Trim47-202ENSMUST00000106441 Gm11569B1AQB1 180 aa7.91□□□□□ -1.14
Trim47-202ENSMUST00000106441 Lce1jD3YUU5 139 aa7.89□□□□□ -1.15
Trim47-202ENSMUST00000106441 Krtap12-1Q9Z287 130 aa7.89□□□□□ -1.15
Trim47-202ENSMUST00000106441 Krtap19-2Q925I0 141 aa7.81□□□□□ -1.16
Trim47-202ENSMUST00000106441 Krtap9-5A2A5X3 358 aa7.78□□□□□ -1.16
Trim47-202ENSMUST00000106441 Krtap19-9aF8WH65 55 aa7.76□□□□□ -1.17
Trim47-202ENSMUST00000106441 Krtap17-1A2A5X6 109 aa7.74□□□□□ -1.17
Trim47-202ENSMUST00000106441 Tnp1P10856 55 aa7.68□□□□□ -1.18
Trim47-202ENSMUST00000106441 Muc5bE9Q5I3 4800 aa7.57□□□□□ -1.2
Trim47-202ENSMUST00000106441 Krtap4-2B1AQ85 167 aa7.52□□□□□ -1.21
Trim47-202ENSMUST00000106441 Lce1gQ9D195 139 aa7.46□□□□□ -1.21
Trim47-202ENSMUST00000106441 Gm11562A0PK51 136 aa7.45□□□□□ -1.22
Trim47-202ENSMUST00000106441 Gm6358A0A087WPH4 74 aa7.42□□□□□ -1.22
Trim47-202ENSMUST00000106441 Lce1iQ9D6P5 149 aa7.4□□□□□ -1.22
Trim47-202ENSMUST00000106441 Krtap8-1O08633 61 aa7.36□□□□□ -1.23
Trim47-202ENSMUST00000106441 Gm11555B1AQ89 175 aa7.34□□□□□ -1.23
Trim47-202ENSMUST00000106441 2310046K23RikA0A0A6YVW6 87 aa7.32□□□□□ -1.24
Trim47-202ENSMUST00000106441 Syne2Q6ZWQ0 6874 aaKnown RBP7.31□□□□□ -1.24
Trim47-202ENSMUST00000106441 Lce1a2Q9D1K4 149 aa7.29□□□□□ -1.24
Trim47-202ENSMUST00000106441 Krtap4-6Q3V4B7 195 aa7.25□□□□□ -1.25
Trim47-202ENSMUST00000106441 Krtap19-9bQ99NG9 58 aa7.23□□□□□ -1.25
Trim47-202ENSMUST00000106441 Mdn1A2ANY6 5589 aaKnown RBP7.23□□□□□ -1.25
Trim47-202ENSMUST00000106441 Gm11596B1AQB0 205 aa7.21□□□□□ -1.26
Trim47-202ENSMUST00000106441 Mt2P02798 61 aa7.16□□□□□ -1.26
Trim47-202ENSMUST00000106441 Krtap4-1Q3UUY3 169 aa7.1□□□□□ -1.27
Trim47-202ENSMUST00000106441 Gm11564A2A4L9 201 aa6.92□□□□□ -1.3
Trim47-202ENSMUST00000106441 Gm11563B1AQ90 168 aa6.92□□□□□ -1.3
Trim47-202ENSMUST00000106441 Gm11595B1AQA7 289 aa6.92□□□□□ -1.3
Trim47-202ENSMUST00000106441 Krtap4-8B1AQA8 209 aa6.92□□□□□ -1.3
Trim47-202ENSMUST00000106441 Krtap9-3Q3V2C1 136 aa6.88□□□□□ -1.31
Trim47-202ENSMUST00000106441 Lce1hQ9D6R3 140 aa6.84□□□□□ -1.32
Trim47-202ENSMUST00000106441 Krtap22-2J3QNX6 67 aa6.8□□□□□ -1.32
Trim47-202ENSMUST00000106441 Krtap4-9B1AQA9 244 aa6.72□□□□□ -1.33
Trim47-202ENSMUST00000106441 Mt4P47945 62 aa6.69□□□□□ -1.34
Trim47-202ENSMUST00000106441 Fsip2A2ARZ3 6995 aa6.65□□□□□ -1.35
Trim47-202ENSMUST00000106441 4933428G20RikQ9D3X4 101 aa6.54□□□□□ -1.36
Trim47-202ENSMUST00000106441 Lce1dQ9D731 133 aa6.52□□□□□ -1.36
Trim47-202ENSMUST00000106441 Lce1bQ9D149 137 aa6.51□□□□□ -1.37
Trim47-202ENSMUST00000106441 Sprr2gO70558 76 aa6.51□□□□□ -1.37
Trim47-202ENSMUST00000106441 Krtap4-13Q9D7P3 165 aa6.48□□□□□ -1.37
Trim47-202ENSMUST00000106441 Gm38119A0A0A6YX29 146 aa6.43□□□□□ -1.38
Trim47-202ENSMUST00000106441 Sprr2kO70562 68 aa6.39□□□□□ -1.39
Trim47-202ENSMUST00000106441 Sprr2dO70555 85 aa6.36□□□□□ -1.39
Trim47-202ENSMUST00000106441 Gm11938Q9D3H4 131 aa6.35□□□□□ -1.39
Trim47-202ENSMUST00000106441 2300003K06RikA2A4M0 262 aa6.32□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms