RNA–Protein interactions for RNA: ENSMUST00000102501.9

Vps39-202, Transcript of Vam6/Vps39-like protein, mousemouse

TSL 1 (best) BASIC

Gene Vps39, Length 4,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39-202ENSMUST00000102501 Lrp2A2ARV4 4660 aa3.9□□□□□ -1.79
Vps39-202ENSMUST00000102501 Abca13Q5SSE9 5034 aa3.89□□□□□ -1.79
Vps39-202ENSMUST00000102501 Crct1Q6PAI5 102 aa3.87□□□□□ -1.79
Vps39-202ENSMUST00000102501 Pkd1O08852 4293 aa3.87□□□□□ -1.79
Vps39-202ENSMUST00000102501 Gm19426M0QWC7 77 aa3.86□□□□□ -1.79
Vps39-202ENSMUST00000102501 Gm20537G3UYK7 97 aa3.86□□□□□ -1.79
Vps39-202ENSMUST00000102501 SacsQ9JLC8 4582 aa3.86□□□□□ -1.79
Vps39-202ENSMUST00000102501 Ndufaf8A2AMZ4 74 aa3.85□□□□□ -1.79
Vps39-202ENSMUST00000102501 Vps13bQ80TY5 3993 aa3.8□□□□□ -1.8
Vps39-202ENSMUST00000102501 Camk2n1Q6QWF9 78 aa3.8□□□□□ -1.8
Vps39-202ENSMUST00000102501 Krtap3-2Q9D638 99 aa3.8□□□□□ -1.8
Vps39-202ENSMUST00000102501 Krtap3-3Q9D7P0 99 aa3.8□□□□□ -1.8
Vps39-202ENSMUST00000102501 Gm9112A2AI92 75 aa3.79□□□□□ -1.8
Vps39-202ENSMUST00000102501 PcloQ9QYX7 5068 aa3.79□□□□□ -1.8
Vps39-202ENSMUST00000102501 Fat2Q5F226 4351 aa3.77□□□□□ -1.81
Vps39-202ENSMUST00000102501 Kmt2cQ8BRH4 4903 aa3.76□□□□□ -1.81
Vps39-202ENSMUST00000102501 Gm17416Q30KP4 66 aa3.75□□□□□ -1.81
Vps39-202ENSMUST00000102501 Dnah8Q91XQ0 4731 aa3.74□□□□□ -1.81
Vps39-202ENSMUST00000102501 Dnhd1D3Z2X2 4750 aa3.71□□□□□ -1.81
Vps39-202ENSMUST00000102501 Gm18596A0A1W2P860 280 aa3.71□□□□□ -1.82
Vps39-202ENSMUST00000102501 Pkhd1l1Q80ZA4 4249 aa3.7□□□□□ -1.82
Vps39-202ENSMUST00000102501 2210017I01RikA0A0A6YVV1 95 aa3.69□□□□□ -1.82
Vps39-202ENSMUST00000102501 Herc1E9PZP8 4859 aa3.69□□□□□ -1.82
Vps39-202ENSMUST00000102501 B930094E09RikQ8C4T2 136 aa3.66□□□□□ -1.82
Vps39-202ENSMUST00000102501 Birc6O88738 4882 aa3.64□□□□□ -1.83
Vps39-202ENSMUST00000102501 Pkhd1E9PZ36 4059 aa3.64□□□□□ -1.83
Vps39-202ENSMUST00000102501 Lce1mQ9CR91 182 aa3.63□□□□□ -1.83
Vps39-202ENSMUST00000102501 Krtap13-1Q8K198 168 aa3.62□□□□□ -1.83
Vps39-202ENSMUST00000102501 Ubr4A2AN08 5180 aa3.59□□□□□ -1.83
Vps39-202ENSMUST00000102501 Krtap3-1A2A591 98 aa3.58□□□□□ -1.84
Vps39-202ENSMUST00000102501 LorP18165 486 aa3.56□□□□□ -1.84
Vps39-202ENSMUST00000102501 Gm17402F6Z0L5 76 aa3.48□□□□□ -1.85
Vps39-202ENSMUST00000102501 Gm40193A0A1B0GT39 78 aa3.46□□□□□ -1.86
Vps39-202ENSMUST00000102501 Ush2AQ2QI47 5193 aa3.44□□□□□ -1.86
Vps39-202ENSMUST00000102501 Krtap16-3Q8C1I6 86 aa3.44□□□□□ -1.86
Vps39-202ENSMUST00000102501 Tnp1P10856 55 aa3.42□□□□□ -1.86
Vps39-202ENSMUST00000102501 Krtap19-3Q925H6 87 aa3.4□□□□□ -1.86
Vps39-202ENSMUST00000102501 4932415D10RikA0A1W2P6U8 4986 aa3.39□□□□□ -1.87
Vps39-202ENSMUST00000102501 Gm19402J3QJV4 266 aa3.39□□□□□ -1.87
Vps39-202ENSMUST00000102501 ZanO88799 5376 aa3.37□□□□□ -1.87
Vps39-202ENSMUST00000102501 Krtap19-1Q925H2 87 aa3.37□□□□□ -1.87
Vps39-202ENSMUST00000102501 Fat4Q2PZL6 4981 aa3.37□□□□□ -1.87
Vps39-202ENSMUST00000102501 Krtap1-5A2A590 122 aa3.37□□□□□ -1.87
Vps39-202ENSMUST00000102501 Krtap1-3A2A588 173 aa3.36□□□□□ -1.87
Vps39-202ENSMUST00000102501 Gm19668J3QMD1 248 aa3.34□□□□□ -1.87
Vps39-202ENSMUST00000102501 Gm7735D3YX18 52 aa3.34□□□□□ -1.87
Vps39-202ENSMUST00000102501 Prm1P02319 51 aa3.32□□□□□ -1.88
Vps39-202ENSMUST00000102501 Gm9789Q8BIG3 52 aa3.3□□□□□ -1.88
Vps39-202ENSMUST00000102501 Rnf213E9Q555 5152 aaKnown RBP3.3□□□□□ -1.88
Vps39-202ENSMUST00000102501 Hmcn2A2AJ76 5100 aa3.29□□□□□ -1.88
Vps39-202ENSMUST00000102501 Mdn1A2ANY6 5589 aaKnown RBP3.28□□□□□ -1.88
Vps39-202ENSMUST00000102501 Krtap1-4Q3V2D6 188 aa3.28□□□□□ -1.89
Vps39-202ENSMUST00000102501 Sprr2a3Q4KL71 83 aa3.28□□□□□ -1.89
Vps39-202ENSMUST00000102501 Sprr2a1Q9CQK8 83 aa3.28□□□□□ -1.89
Vps39-202ENSMUST00000102501 Krtap7-1Q9D3I6 87 aa3.23□□□□□ -1.89
Vps39-202ENSMUST00000102501 Krtap12-1Q9Z287 130 aa3.22□□□□□ -1.89
Vps39-202ENSMUST00000102501 Lce1jD3YUU5 139 aa3.19□□□□□ -1.9
Vps39-202ENSMUST00000102501 Krtap19-9aF8WH65 55 aa3.18□□□□□ -1.9
Vps39-202ENSMUST00000102501 Krtap9-5A2A5X3 358 aa3.16□□□□□ -1.9
Vps39-202ENSMUST00000102501 Krtap17-1A2A5X6 109 aa3.14□□□□□ -1.91
Vps39-202ENSMUST00000102501 Gm10061D3Z714 54 aa3.09□□□□□ -1.92
Vps39-202ENSMUST00000102501 Krtap19-2Q925I0 141 aa3.07□□□□□ -1.92
Vps39-202ENSMUST00000102501 Gm11569B1AQB1 180 aa3□□□□□ -1.93
Vps39-202ENSMUST00000102501 Krtap19-9bQ99NG9 58 aa3□□□□□ -1.93
Vps39-202ENSMUST00000102501 Krtap8-1O08633 61 aa2.95□□□□□ -1.94
Vps39-202ENSMUST00000102501 Lce1iQ9D6P5 149 aa2.94□□□□□ -1.94
Vps39-202ENSMUST00000102501 Krtap31-1Q9D644 177 aa2.93□□□□□ -1.94
Vps39-202ENSMUST00000102501 Mt2P02798 61 aa2.93□□□□□ -1.94
Vps39-202ENSMUST00000102501 Krtap31-2Q8CAY5 177 aa2.92□□□□□ -1.94
Vps39-202ENSMUST00000102501 Lce1a2Q9D1K4 149 aa2.91□□□□□ -1.94
Vps39-202ENSMUST00000102501 Gm6358A0A087WPH4 74 aa2.9□□□□□ -1.95
Vps39-202ENSMUST00000102501 4933428G20RikQ9D3X4 101 aa2.9□□□□□ -1.95
Vps39-202ENSMUST00000102501 Fsip2A2ARZ3 6995 aa2.89□□□□□ -1.95
Vps39-202ENSMUST00000102501 Krtap4-6Q3V4B7 195 aa2.84□□□□□ -1.95
Vps39-202ENSMUST00000102501 Krtap4-2B1AQ85 167 aa2.84□□□□□ -1.96
Vps39-202ENSMUST00000102501 SspoQ8CG65 4998 aa2.82□□□□□ -1.96
Vps39-202ENSMUST00000102501 Sprr2kO70562 68 aa2.8□□□□□ -1.96
Vps39-202ENSMUST00000102501 Krtap22-2J3QNX6 67 aa2.78□□□□□ -1.96
Vps39-202ENSMUST00000102501 Krtap4-1Q3UUY3 169 aa2.77□□□□□ -1.97
Vps39-202ENSMUST00000102501 Lce1gQ9D195 139 aa2.77□□□□□ -1.97
Vps39-202ENSMUST00000102501 Muc5bE9Q5I3 4800 aa2.77□□□□□ -1.97
Vps39-202ENSMUST00000102501 2310046K23RikA0A0A6YVW6 87 aa2.76□□□□□ -1.97
Vps39-202ENSMUST00000102501 Syne1Q6ZWR6 8799 aa2.76□□□□□ -1.97
Vps39-202ENSMUST00000102501 Gm38119A0A0A6YX29 146 aa2.75□□□□□ -1.97
Vps39-202ENSMUST00000102501 Krtap9-3Q3V2C1 136 aa2.73□□□□□ -1.97
Vps39-202ENSMUST00000102501 Syne2Q6ZWQ0 6874 aaKnown RBP2.72□□□□□ -1.97
Vps39-202ENSMUST00000102501 Mt4P47945 62 aa2.71□□□□□ -1.98
Vps39-202ENSMUST00000102501 Gm11596B1AQB0 205 aa2.7□□□□□ -1.98
Vps39-202ENSMUST00000102501 Gm10272F7CZ33 110 aa2.7□□□□□ -1.98
Vps39-202ENSMUST00000102501 Muc16A0A140LJ72 8478 aa2.69□□□□□ -1.98
Vps39-202ENSMUST00000102501 Lce1hQ9D6R3 140 aa2.66□□□□□ -1.98
Vps39-202ENSMUST00000102501 Gm11564A2A4L9 201 aa2.65□□□□□ -1.98
Vps39-202ENSMUST00000102501 Gm11563B1AQ90 168 aa2.65□□□□□ -1.98
Vps39-202ENSMUST00000102501 Gm11595B1AQA7 289 aa2.65□□□□□ -1.98
Vps39-202ENSMUST00000102501 Krtap4-8B1AQA8 209 aa2.65□□□□□ -1.98
Vps39-202ENSMUST00000102501 Krtap4-9B1AQA9 244 aa2.64□□□□□ -1.99
Vps39-202ENSMUST00000102501 Krtap4-7Q9D732 168 aa2.6□□□□□ -1.99
Vps39-202ENSMUST00000102501 Lce3bQ9CQM7 98 aa2.59□□□□□ -1.99
Vps39-202ENSMUST00000102501 Krtap4-13Q9D7P3 165 aa2.58□□□□□ -2
Vps39-202ENSMUST00000102501 Macf1Q9QXZ0 7354 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 22,080 RNA–protein pairs in 7 ms