RNA–Protein interactions for RNA: ENSMUST00000100237.3

Ttf1-201, Transcript of Transcription termination factor 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ttf1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttf1-201ENSMUST00000100237 Ryr1E9PZQ0 5035 aa3.7□□□□□ -1.82
Ttf1-201ENSMUST00000100237 Mt3P28184 68 aa3.69□□□□□ -1.82
Ttf1-201ENSMUST00000100237 2310079G19RikQ9D6L6 185 aa3.65□□□□□ -1.82
Ttf1-201ENSMUST00000100237 A030005L19RikA0A1Y7VIU2 113 aa3.64□□□□□ -1.83
Ttf1-201ENSMUST00000100237 Gm9736A0A1W2P7N1 277 aa3.6□□□□□ -1.83
Ttf1-201ENSMUST00000100237 Hspg2Q05793 3707 aaKnown RBP3.58□□□□□ -1.84
Ttf1-201ENSMUST00000100237 Krtap17-1A2A5X6 109 aa3.54□□□□□ -1.84
Ttf1-201ENSMUST00000100237 B930094E09RikQ8C4T2 136 aa3.52□□□□□ -1.85
Ttf1-201ENSMUST00000100237 Gm9918Q8BUR5 174 aa3.5□□□□□ -1.85
Ttf1-201ENSMUST00000100237 Lce1kJ3QP15 125 aa3.49□□□□□ -1.85
Ttf1-201ENSMUST00000100237 Gm17416Q30KP4 66 aa3.48□□□□□ -1.85
Ttf1-201ENSMUST00000100237 Dnah6E9Q0B6 4144 aa3.47□□□□□ -1.85
Ttf1-201ENSMUST00000100237 Dnah10D3YYQ8 4591 aa3.47□□□□□ -1.85
Ttf1-201ENSMUST00000100237 Kmt2aP55200 3966 aa3.46□□□□□ -1.86
Ttf1-201ENSMUST00000100237 Krtap7-1Q9D3I6 87 aa3.45□□□□□ -1.86
Ttf1-201ENSMUST00000100237 Dnah14A0A140LIJ4 4489 aa3.45□□□□□ -1.86
Ttf1-201ENSMUST00000100237 Krtap19-5O08632 62 aa3.44□□□□□ -1.86
Ttf1-201ENSMUST00000100237 Dnah11E9Q7N9 4488 aa3.42□□□□□ -1.86
Ttf1-201ENSMUST00000100237 Gm40193A0A1B0GT39 78 aa3.42□□□□□ -1.86
Ttf1-201ENSMUST00000100237 Krtap1-5A2A590 122 aa3.42□□□□□ -1.86
Ttf1-201ENSMUST00000100237 Dnah3Q8BW94 4083 aa3.4□□□□□ -1.86
Ttf1-201ENSMUST00000100237 Gm10142J3KMP7 120 aa3.4□□□□□ -1.87
Ttf1-201ENSMUST00000100237 Sprr2kO70562 68 aa3.39□□□□□ -1.87
Ttf1-201ENSMUST00000100237 Dnah17Q69Z23 4481 aa3.37□□□□□ -1.87
Ttf1-201ENSMUST00000100237 Crct1Q6PAI5 102 aa3.37□□□□□ -1.87
Ttf1-201ENSMUST00000100237 Huwe1Q7TMY8 4377 aaKnown RBP3.36□□□□□ -1.87
Ttf1-201ENSMUST00000100237 Krtap12-1Q9Z287 130 aa3.35□□□□□ -1.87
Ttf1-201ENSMUST00000100237 Dnah7bL7N1Y0 4068 aa3.35□□□□□ -1.87
Ttf1-201ENSMUST00000100237 2300003K06RikA2A4M0 262 aa3.33□□□□□ -1.88
Ttf1-201ENSMUST00000100237 Gm17402F6Z0L5 76 aa3.33□□□□□ -1.88
Ttf1-201ENSMUST00000100237 Dnah1E9Q8T7 4250 aa3.31□□□□□ -1.88
Ttf1-201ENSMUST00000100237 Tnp1P10856 55 aa3.31□□□□□ -1.88
Ttf1-201ENSMUST00000100237 Dync2h1Q45VK7 4306 aa3.31□□□□□ -1.88
Ttf1-201ENSMUST00000100237 PrkdcP97313 4128 aa3.3□□□□□ -1.88
Ttf1-201ENSMUST00000100237 Prm1P02319 51 aa3.3□□□□□ -1.88
Ttf1-201ENSMUST00000100237 4933428G20RikQ9D3X4 101 aa3.3□□□□□ -1.88
Ttf1-201ENSMUST00000100237 PlecQ9QXS1 4691 aaKnown RBP3.28□□□□□ -1.88
Ttf1-201ENSMUST00000100237 Dnah9B1AR51 4484 aa3.27□□□□□ -1.89
Ttf1-201ENSMUST00000100237 Lce1fB9EJP6 147 aa3.27□□□□□ -1.89
Ttf1-201ENSMUST00000100237 Lce1cQ9D1C5 147 aa3.27□□□□□ -1.89
Ttf1-201ENSMUST00000100237 Gm10318A0A1W2P728 225 aa3.27□□□□□ -1.89
Ttf1-201ENSMUST00000100237 Dnah5Q8VHE6 4621 aa3.26□□□□□ -1.89
Ttf1-201ENSMUST00000100237 Fras1Q80T14 4010 aa3.25□□□□□ -1.89
Ttf1-201ENSMUST00000100237 Krtap13-1Q8K198 168 aa3.24□□□□□ -1.89
Ttf1-201ENSMUST00000100237 Vps13dB1ART2 4390 aa3.23□□□□□ -1.89
Ttf1-201ENSMUST00000100237 Sprr2gO70558 76 aa3.22□□□□□ -1.89
Ttf1-201ENSMUST00000100237 Hectd4E9Q2E4 4418 aa3.22□□□□□ -1.89
Ttf1-201ENSMUST00000100237 Gm7735D3YX18 52 aa3.21□□□□□ -1.9
Ttf1-201ENSMUST00000100237 Dnah7aE9Q0T8 4024 aa3.19□□□□□ -1.9
Ttf1-201ENSMUST00000100237 Herc2Q4U2R1 4836 aa3.19□□□□□ -1.9
Ttf1-201ENSMUST00000100237 Stard9Q80TF6 4561 aa3.18□□□□□ -1.9
Ttf1-201ENSMUST00000100237 Dnah7cA0A087WR13 4024 aa3.16□□□□□ -1.9
Ttf1-201ENSMUST00000100237 Pkd1O08852 4293 aa3.16□□□□□ -1.9
Ttf1-201ENSMUST00000100237 Kiaa1109A2AAE1 5005 aa3.15□□□□□ -1.9
Ttf1-201ENSMUST00000100237 Gm11567Q9D141 195 aa3.15□□□□□ -1.91
Ttf1-201ENSMUST00000100237 HydinQ80W93 5154 aa3.14□□□□□ -1.91
Ttf1-201ENSMUST00000100237 A0A286YCP9 139 aa3.13□□□□□ -1.91
Ttf1-201ENSMUST00000100237 Dnah2P0C6F1 4456 aa3.13□□□□□ -1.91
Ttf1-201ENSMUST00000100237 Dnah8Q91XQ0 4731 aa3.13□□□□□ -1.91
Ttf1-201ENSMUST00000100237 Vps13bQ80TY5 3993 aa3.12□□□□□ -1.91
Ttf1-201ENSMUST00000100237 PcloQ9QYX7 5068 aa3.12□□□□□ -1.91
Ttf1-201ENSMUST00000100237 Gm10272F7CZ33 110 aa3.11□□□□□ -1.91
Ttf1-201ENSMUST00000100237 ApobE9Q414 4505 aa3.1□□□□□ -1.91
Ttf1-201ENSMUST00000100237 Ryr3A2AGL3 4863 aa3.09□□□□□ -1.91
Ttf1-201ENSMUST00000100237 Lrp1bQ9JI18 4599 aa3.09□□□□□ -1.91
Ttf1-201ENSMUST00000100237 Mycbp2Q7TPH6 4711 aa3.09□□□□□ -1.92
Ttf1-201ENSMUST00000100237 Dync1h1Q9JHU4 4644 aaKnown RBP3.08□□□□□ -1.92
Ttf1-201ENSMUST00000100237 Ryr2E9Q401 4966 aaKnown RBP3.07□□□□□ -1.92
Ttf1-201ENSMUST00000100237 4932415D10RikA0A1W2P6U8 4986 aa3.05□□□□□ -1.92
Ttf1-201ENSMUST00000100237 Mdn1A2ANY6 5589 aaKnown RBP3.04□□□□□ -1.92
Ttf1-201ENSMUST00000100237 Fat1A0A1L1SQU7 4645 aa3.04□□□□□ -1.92
Ttf1-201ENSMUST00000100237 2310046K23RikA0A0A6YVW6 87 aa3.04□□□□□ -1.92
Ttf1-201ENSMUST00000100237 Krtap8-1O08633 61 aa3.03□□□□□ -1.92
Ttf1-201ENSMUST00000100237 Sprr2a3Q4KL71 83 aa3.02□□□□□ -1.93
Ttf1-201ENSMUST00000100237 Sprr2a1Q9CQK8 83 aa3.02□□□□□ -1.93
Ttf1-201ENSMUST00000100237 Pkhd1l1Q80ZA4 4249 aa3.01□□□□□ -1.93
Ttf1-201ENSMUST00000100237 Pkhd1E9PZ36 4059 aa3.01□□□□□ -1.93
Ttf1-201ENSMUST00000100237 Gm9789Q8BIG3 52 aa3.01□□□□□ -1.93
Ttf1-201ENSMUST00000100237 Dnhd1D3Z2X2 4750 aa3□□□□□ -1.93
Ttf1-201ENSMUST00000100237 SacsQ9JLC8 4582 aa2.99□□□□□ -1.93
Ttf1-201ENSMUST00000100237 Gm11562A0PK51 136 aa2.98□□□□□ -1.93
Ttf1-201ENSMUST00000100237 Lrp2A2ARV4 4660 aa2.98□□□□□ -1.93
Ttf1-201ENSMUST00000100237 Lrp1Q91ZX7 4545 aaKnown RBP2.93□□□□□ -1.94
Ttf1-201ENSMUST00000100237 Gm11569B1AQB1 180 aa2.93□□□□□ -1.94
Ttf1-201ENSMUST00000100237 Fat2Q5F226 4351 aa2.92□□□□□ -1.94
Ttf1-201ENSMUST00000100237 Kmt2cQ8BRH4 4903 aa2.91□□□□□ -1.94
Ttf1-201ENSMUST00000100237 Krtap1-4Q3V2D6 188 aa2.91□□□□□ -1.94
Ttf1-201ENSMUST00000100237 Krtap4-9B1AQA9 244 aa2.89□□□□□ -1.95
Ttf1-201ENSMUST00000100237 Gm11595B1AQA7 289 aa2.89□□□□□ -1.95
Ttf1-201ENSMUST00000100237 Gm2431E9Q8S1 172 aa2.89□□□□□ -1.95
Ttf1-201ENSMUST00000100237 Fat3Q8BNA6 4555 aa2.88□□□□□ -1.95
Ttf1-201ENSMUST00000100237 Krtap19-9aF8WH65 55 aa2.87□□□□□ -1.95
Ttf1-201ENSMUST00000100237 Ubr4A2AN08 5180 aa2.86□□□□□ -1.95
Ttf1-201ENSMUST00000100237 Gm10061D3Z714 54 aa2.86□□□□□ -1.95
Ttf1-201ENSMUST00000100237 Birc6O88738 4882 aa2.85□□□□□ -1.95
Ttf1-201ENSMUST00000100237 Gm6358A0A087WPH4 74 aa2.84□□□□□ -1.95
Ttf1-201ENSMUST00000100237 Rnf213E9Q555 5152 aaKnown RBP2.84□□□□□ -1.95
Ttf1-201ENSMUST00000100237 Abca13Q5SSE9 5034 aa2.83□□□□□ -1.96
Ttf1-201ENSMUST00000100237 Gm11596B1AQB0 205 aa2.82□□□□□ -1.96
Ttf1-201ENSMUST00000100237 Gm11554B1AQB2 190 aa2.81□□□□□ -1.96
Retrieved 100 of 22,080 RNA–protein pairs in 88.4 ms