RNA–Protein interactions for RNA: ENSMUST00000100237.3

Ttf1-201, Transcript of Transcription termination factor 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ttf1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttf1-201ENSMUST00000100237 Chic1Q8CBW7 227 aa16.22■□□□□ 0.19
Ttf1-201ENSMUST00000100237 Mapk8ip2Q9ERE9 830 aa15.72■□□□□ 0.11
Ttf1-201ENSMUST00000100237 Phf23Q8BSN5 401 aa14.43□□□□□ -0.1
Ttf1-201ENSMUST00000100237 Plppr3Q7TPB0 716 aa14.33□□□□□ -0.12
Ttf1-201ENSMUST00000100237 Gab3Q8BSM5 595 aa14.16□□□□□ -0.14
Ttf1-201ENSMUST00000100237 Senp3Q9EP97 568 aaKnown RBP13.34□□□□□ -0.27
Ttf1-201ENSMUST00000100237 Kcna4Q61423 654 aa13.02□□□□□ -0.33
Ttf1-201ENSMUST00000100237 Trap1aP19473 224 aa12.31□□□□□ -0.44
Ttf1-201ENSMUST00000100237 Ppargc1bQ8VHJ7 1014 aa12.26□□□□□ -0.45
Ttf1-201ENSMUST00000100237 Ube2uB1AUC4 352 aa12.17□□□□□ -0.46
Ttf1-201ENSMUST00000100237 Rhox8Q6VSS7 320 aa12.04□□□□□ -0.48
Ttf1-201ENSMUST00000100237 Fam163aQ8CAA5 168 aa11.96□□□□□ -0.49
Ttf1-201ENSMUST00000100237 Slc4a1apE9PX68 744 aa11.93□□□□□ -0.5
Ttf1-201ENSMUST00000100237 Ehmt2Q9Z148 1263 aaKnown RBP11.8□□□□□ -0.52
Ttf1-201ENSMUST00000100237 Chrna2Q91X60 512 aa11.57□□□□□ -0.56
Ttf1-201ENSMUST00000100237 Hoxd11P23813 323 aa11.54□□□□□ -0.56
Ttf1-201ENSMUST00000100237 Rsph4aQ8BYM7 716 aa11.51□□□□□ -0.57
Ttf1-201ENSMUST00000100237 Dmrt2Q8BG36 561 aa11.49□□□□□ -0.57
Ttf1-201ENSMUST00000100237 Ppp4r2Q0VGB7 417 aa11.41□□□□□ -0.58
Ttf1-201ENSMUST00000100237 Znf219Q6IQX8 726 aa11.39□□□□□ -0.59
Ttf1-201ENSMUST00000100237 1700123L14RikQ3V2K7 440 aa11.38□□□□□ -0.59
Ttf1-201ENSMUST00000100237 NischQ80TM9 1593 aa11.31□□□□□ -0.6
Ttf1-201ENSMUST00000100237 ArsiQ32KI9 573 aa11.25□□□□□ -0.61
Ttf1-201ENSMUST00000100237 DiexfQ8BTT6 772 aaKnown RBP11.23□□□□□ -0.61
Ttf1-201ENSMUST00000100237 Prm3Q62100 101 aa11.21□□□□□ -0.61
Ttf1-201ENSMUST00000100237 Rpgrip1Q9EPQ2 1331 aa11.2□□□□□ -0.62
Ttf1-201ENSMUST00000100237 Pcgf6Q99NA9 353 aa11.17□□□□□ -0.62
Ttf1-201ENSMUST00000100237 AcrbpQ3V140 540 aa11.1□□□□□ -0.63
Ttf1-201ENSMUST00000100237 Rimbp2Q80U40 1072 aa11.08□□□□□ -0.64
Ttf1-201ENSMUST00000100237 Abcc9P70170 1546 aa11.08□□□□□ -0.64
Ttf1-201ENSMUST00000100237 Gm35339A0A140LHH9 1649 aa11.04□□□□□ -0.64
Ttf1-201ENSMUST00000100237 Hs6st3Q9QYK4 470 aa10.95□□□□□ -0.66
Ttf1-201ENSMUST00000100237 Atf5O70191 283 aa10.9□□□□□ -0.67
Ttf1-201ENSMUST00000100237 CenpbP27790 599 aa10.89□□□□□ -0.67
Ttf1-201ENSMUST00000100237 Fam71e1A1L3C1 212 aa10.88□□□□□ -0.67
Ttf1-201ENSMUST00000100237 Ccdc136Q3TVA9 1136 aa10.86□□□□□ -0.67
Ttf1-201ENSMUST00000100237 Bcl11aQ9QYE3 773 aa10.85□□□□□ -0.67
Ttf1-201ENSMUST00000100237 Amer1Q7TS75 1132 aa10.83□□□□□ -0.68
Ttf1-201ENSMUST00000100237 Esf1Q3V1V3 845 aaKnown RBP10.82□□□□□ -0.68
Ttf1-201ENSMUST00000100237 Ifnlr1Q8CGK5 535 aa10.78□□□□□ -0.68
Ttf1-201ENSMUST00000100237 Las1lA2BE28 776 aaKnown RBP10.77□□□□□ -0.68
Ttf1-201ENSMUST00000100237 Myt1Q8CFC2 1127 aa10.77□□□□□ -0.69
Ttf1-201ENSMUST00000100237 Trim41Q5NCC3 630 aa10.76□□□□□ -0.69
Ttf1-201ENSMUST00000100237 Nlrp6Q91WS2 869 aa10.73□□□□□ -0.69
Ttf1-201ENSMUST00000100237 PrkcshO08795 521 aa10.73□□□□□ -0.69
Ttf1-201ENSMUST00000100237 Rtn4Q99P72 1162 aaKnown RBP10.73□□□□□ -0.69
Ttf1-201ENSMUST00000100237 Akt1s1Q9D1F4 257 aa10.72□□□□□ -0.69
Ttf1-201ENSMUST00000100237 Npm2Q80W85 207 aa10.68□□□□□ -0.7
Ttf1-201ENSMUST00000100237 Ccdc180J3QNE4 1664 aa10.66□□□□□ -0.7
Ttf1-201ENSMUST00000100237 Bach1P97302 739 aa10.66□□□□□ -0.7
Ttf1-201ENSMUST00000100237 Neurod1Q60867 357 aa10.65□□□□□ -0.7
Ttf1-201ENSMUST00000100237 Rtl1Q7M732 1744 aa10.62□□□□□ -0.71
Ttf1-201ENSMUST00000100237 Cngb1E1AZ71 1325 aa10.59□□□□□ -0.71
Ttf1-201ENSMUST00000100237 Prdm10Q3UTQ7 1184 aa10.58□□□□□ -0.72
Ttf1-201ENSMUST00000100237 Ttbk1Q6PCN3 1308 aa10.57□□□□□ -0.72
Ttf1-201ENSMUST00000100237 Acin1Q9JIX8 1338 aaKnown RBP10.57□□□□□ -0.72
Ttf1-201ENSMUST00000100237 MyclP10166 368 aa10.57□□□□□ -0.72
Ttf1-201ENSMUST00000100237 Zeb1Q64318 1117 aa10.56□□□□□ -0.72
Ttf1-201ENSMUST00000100237 HrcG5E8J6 738 aa10.52□□□□□ -0.73
Ttf1-201ENSMUST00000100237 WdpcpQ8C456 722 aa10.51□□□□□ -0.73
Ttf1-201ENSMUST00000100237 Pelp1Q9DBD5 1123 aaKnown RBP10.45□□□□□ -0.74
Ttf1-201ENSMUST00000100237 Abcc8B2RUS7 1588 aa10.44□□□□□ -0.74
Ttf1-201ENSMUST00000100237 Dnajc5bQ9CQ94 199 aa10.44□□□□□ -0.74
Ttf1-201ENSMUST00000100237 Ecm2Q5FW85 670 aa10.43□□□□□ -0.74
Ttf1-201ENSMUST00000100237 Il27Q8K3I6 234 aa10.41□□□□□ -0.74
Ttf1-201ENSMUST00000100237 Supt5hO55201 1082 aaKnown RBP10.4□□□□□ -0.75
Ttf1-201ENSMUST00000100237 Csrnp3P59055 597 aa10.39□□□□□ -0.75
Ttf1-201ENSMUST00000100237 Sox12Q04890 314 aa10.39□□□□□ -0.75
Ttf1-201ENSMUST00000100237 Tshz2Q68FE9 1030 aa10.39□□□□□ -0.75
Ttf1-201ENSMUST00000100237 Wdr66E9Q743 1299 aa10.36□□□□□ -0.75
Ttf1-201ENSMUST00000100237 Cdca7Q9D0M2 382 aa10.36□□□□□ -0.75
Ttf1-201ENSMUST00000100237 NefmP08553 848 aa10.3□□□□□ -0.76
Ttf1-201ENSMUST00000100237 G430095P16RikE9Q913 147 aa10.29□□□□□ -0.76
Ttf1-201ENSMUST00000100237 Slc34a2Q9DBP0 697 aa10.28□□□□□ -0.76
Ttf1-201ENSMUST00000100237 Ubl4bQ9CQ84 188 aa10.27□□□□□ -0.77
Ttf1-201ENSMUST00000100237 Grwd1Q810D6 446 aaKnown RBP10.27□□□□□ -0.77
Ttf1-201ENSMUST00000100237 Styxl1Q9DAR2 321 aa10.26□□□□□ -0.77
Ttf1-201ENSMUST00000100237 Gm38655A0A286YDK6 273 aa10.25□□□□□ -0.77
Ttf1-201ENSMUST00000100237 Npm1Q61937 292 aaKnown RBP10.25□□□□□ -0.77
Ttf1-201ENSMUST00000100237 Myt1lP97500 1187 aa10.25□□□□□ -0.77
Ttf1-201ENSMUST00000100237 CatipB9EKE5 520 aa10.22□□□□□ -0.77
Ttf1-201ENSMUST00000100237 Gm13697A2AK42 830 aa10.2□□□□□ -0.78
Ttf1-201ENSMUST00000100237 Zcchc6Q5BLK4 1491 aaKnown RBP10.2□□□□□ -0.78
Ttf1-201ENSMUST00000100237 Arid3aQ62431 601 aa10.18□□□□□ -0.78
Ttf1-201ENSMUST00000100237 Riok3Q9DBU3 519 aaKnown RBP10.17□□□□□ -0.78
Ttf1-201ENSMUST00000100237 Slc24a1Q91WD8 1130 aa10.17□□□□□ -0.78
Ttf1-201ENSMUST00000100237 UbtfP25976 765 aaKnown RBP10.16□□□□□ -0.78
Ttf1-201ENSMUST00000100237 Hdac5Q9Z2V6 1113 aa10.16□□□□□ -0.78
Ttf1-201ENSMUST00000100237 Pde4cQ3UEI1 686 aa10.16□□□□□ -0.78
Ttf1-201ENSMUST00000100237 Pknox2Q8BG99 474 aa10.12□□□□□ -0.79
Ttf1-201ENSMUST00000100237 MpndQ3TV65 487 aa10.11□□□□□ -0.79
Ttf1-201ENSMUST00000100237 Aplp2Q06335 707 aa10.1□□□□□ -0.79
Ttf1-201ENSMUST00000100237 Egfem1Q8C088 590 aa10.09□□□□□ -0.79
Ttf1-201ENSMUST00000100237 Skida1Q80YR3 822 aa10.07□□□□□ -0.8
Ttf1-201ENSMUST00000100237 Anks4bQ8K3X6 423 aa10.05□□□□□ -0.8
Ttf1-201ENSMUST00000100237 Abcb7Q61102 752 aaKnown RBP10.05□□□□□ -0.8
Ttf1-201ENSMUST00000100237 Skap1Q3UUV5 355 aa10.02□□□□□ -0.81
Ttf1-201ENSMUST00000100237 Dcaf1Q80TR8 1506 aa9.97□□□□□ -0.81
Ttf1-201ENSMUST00000100237 Zbtb7aO88939 569 aaKnown RBP9.96□□□□□ -0.82
Ttf1-201ENSMUST00000100237 Cdk11bP24788 784 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 116.3 ms