RNA–Protein interactions for RNA: ENSMUST00000089912.11

Casc4-202, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-202ENSMUST00000089912 Prm2P07978 107 aa6.67□□□□□ -1.34
Casc4-202ENSMUST00000089912 Krtap19-5O08632 62 aa6.65□□□□□ -1.34
Casc4-202ENSMUST00000089912 Spink7Q6IE32 76 aa6.59□□□□□ -1.35
Casc4-202ENSMUST00000089912 Ryr1E9PZQ0 5035 aa6.58□□□□□ -1.36
Casc4-202ENSMUST00000089912 BC029722A0A0N4SW31 51 aa6.54□□□□□ -1.36
Casc4-202ENSMUST00000089912 Krtap3-1A2A591 98 aa6.54□□□□□ -1.36
Casc4-202ENSMUST00000089912 Abca13Q5SSE9 5034 aa6.54□□□□□ -1.36
Casc4-202ENSMUST00000089912 HydinQ80W93 5154 aa6.53□□□□□ -1.36
Casc4-202ENSMUST00000089912 Lrp2A2ARV4 4660 aa6.5□□□□□ -1.37
Casc4-202ENSMUST00000089912 B930094E09RikQ8C4T2 136 aa6.5□□□□□ -1.37
Casc4-202ENSMUST00000089912 Crct1Q6PAI5 102 aa6.49□□□□□ -1.37
Casc4-202ENSMUST00000089912 2210017I01RikA0A0A6YVV1 95 aa6.38□□□□□ -1.39
Casc4-202ENSMUST00000089912 Gm17416Q30KP4 66 aa6.38□□□□□ -1.39
Casc4-202ENSMUST00000089912 Krtap13-1Q8K198 168 aa6.37□□□□□ -1.39
Casc4-202ENSMUST00000089912 Gm19668J3QMD1 248 aa6.37□□□□□ -1.39
Casc4-202ENSMUST00000089912 Kmt2cQ8BRH4 4903 aa6.35□□□□□ -1.39
Casc4-202ENSMUST00000089912 Kiaa1109A2AAE1 5005 aa6.35□□□□□ -1.39
Casc4-202ENSMUST00000089912 Fam229aB2KGE5 128 aa6.35□□□□□ -1.39
Casc4-202ENSMUST00000089912 Gm19402J3QJV4 266 aa6.34□□□□□ -1.39
Casc4-202ENSMUST00000089912 Dnah8Q91XQ0 4731 aa6.3□□□□□ -1.4
Casc4-202ENSMUST00000089912 Krtap7-1Q9D3I6 87 aa6.29□□□□□ -1.4
Casc4-202ENSMUST00000089912 Camk2n1Q6QWF9 78 aa6.24□□□□□ -1.41
Casc4-202ENSMUST00000089912 Gm9112A2AI92 75 aa6.21□□□□□ -1.41
Casc4-202ENSMUST00000089912 Herc2Q4U2R1 4836 aa6.21□□□□□ -1.41
Casc4-202ENSMUST00000089912 Sec61bQ9CQS8 96 aaKnown RBP6.2□□□□□ -1.42
Casc4-202ENSMUST00000089912 Ryr2E9Q401 4966 aaKnown RBP6.17□□□□□ -1.42
Casc4-202ENSMUST00000089912 Dnhd1D3Z2X2 4750 aa6.14□□□□□ -1.43
Casc4-202ENSMUST00000089912 PcloQ9QYX7 5068 aa6.05□□□□□ -1.44
Casc4-202ENSMUST00000089912 Gm40193A0A1B0GT39 78 aa6.01□□□□□ -1.45
Casc4-202ENSMUST00000089912 Gm17402F6Z0L5 76 aa5.91□□□□□ -1.46
Casc4-202ENSMUST00000089912 Krtap1-5A2A590 122 aa5.91□□□□□ -1.46
Casc4-202ENSMUST00000089912 Ubr4A2AN08 5180 aa5.9□□□□□ -1.47
Casc4-202ENSMUST00000089912 Sprr2a3Q4KL71 83 aa5.88□□□□□ -1.47
Casc4-202ENSMUST00000089912 Sprr2a1Q9CQK8 83 aa5.88□□□□□ -1.47
Casc4-202ENSMUST00000089912 Fat4Q2PZL6 4981 aa5.83□□□□□ -1.48
Casc4-202ENSMUST00000089912 Krtap16-3Q8C1I6 86 aa5.83□□□□□ -1.48
Casc4-202ENSMUST00000089912 Herc1E9PZP8 4859 aa5.77□□□□□ -1.49
Casc4-202ENSMUST00000089912 Tnp1P10856 55 aa5.71□□□□□ -1.5
Casc4-202ENSMUST00000089912 Birc6O88738 4882 aa5.68□□□□□ -1.5
Casc4-202ENSMUST00000089912 Krtap1-4Q3V2D6 188 aa5.68□□□□□ -1.5
Casc4-202ENSMUST00000089912 Krtap19-3Q925H6 87 aa5.68□□□□□ -1.5
Casc4-202ENSMUST00000089912 ZanO88799 5376 aa5.67□□□□□ -1.5
Casc4-202ENSMUST00000089912 Krtap19-1Q925H2 87 aa5.65□□□□□ -1.5
Casc4-202ENSMUST00000089912 LorP18165 486 aa5.62□□□□□ -1.51
Casc4-202ENSMUST00000089912 Ush2AQ2QI47 5193 aa5.57□□□□□ -1.52
Casc4-202ENSMUST00000089912 Lce1jD3YUU5 139 aa5.57□□□□□ -1.52
Casc4-202ENSMUST00000089912 Hmcn2A2AJ76 5100 aa5.55□□□□□ -1.52
Casc4-202ENSMUST00000089912 4932415D10RikA0A1W2P6U8 4986 aa5.51□□□□□ -1.53
Casc4-202ENSMUST00000089912 Rnf213E9Q555 5152 aaKnown RBP5.49□□□□□ -1.53
Casc4-202ENSMUST00000089912 Krtap17-1A2A5X6 109 aa5.47□□□□□ -1.53
Casc4-202ENSMUST00000089912 Krtap12-1Q9Z287 130 aa5.43□□□□□ -1.54
Casc4-202ENSMUST00000089912 Krtap19-9aF8WH65 55 aa5.4□□□□□ -1.55
Casc4-202ENSMUST00000089912 Krtap1-3A2A588 173 aa5.3□□□□□ -1.56
Casc4-202ENSMUST00000089912 Gm18596A0A1W2P860 280 aa5.24□□□□□ -1.57
Casc4-202ENSMUST00000089912 Lce1mQ9CR91 182 aa5.22□□□□□ -1.57
Casc4-202ENSMUST00000089912 Krtap9-3Q3V2C1 136 aa5.19□□□□□ -1.58
Casc4-202ENSMUST00000089912 Krtap9-5A2A5X3 358 aa5.16□□□□□ -1.58
Casc4-202ENSMUST00000089912 Krtap19-9bQ99NG9 58 aa5.14□□□□□ -1.59
Casc4-202ENSMUST00000089912 Lce1iQ9D6P5 149 aa5.14□□□□□ -1.59
Casc4-202ENSMUST00000089912 Lce1a2Q9D1K4 149 aa5.13□□□□□ -1.59
Casc4-202ENSMUST00000089912 Krtap8-1O08633 61 aa5.09□□□□□ -1.59
Casc4-202ENSMUST00000089912 Mdn1A2ANY6 5589 aaKnown RBP5.08□□□□□ -1.6
Casc4-202ENSMUST00000089912 Krtap19-2Q925I0 141 aa5.04□□□□□ -1.6
Casc4-202ENSMUST00000089912 Lce1hQ9D6R3 140 aa5.04□□□□□ -1.6
Casc4-202ENSMUST00000089912 2310046K23RikA0A0A6YVW6 87 aa5.02□□□□□ -1.61
Casc4-202ENSMUST00000089912 SspoQ8CG65 4998 aa4.94□□□□□ -1.62
Casc4-202ENSMUST00000089912 Gm6358A0A087WPH4 74 aa4.89□□□□□ -1.63
Casc4-202ENSMUST00000089912 Mt2P02798 61 aa4.86□□□□□ -1.63
Casc4-202ENSMUST00000089912 Lce1dQ9D731 133 aa4.86□□□□□ -1.63
Casc4-202ENSMUST00000089912 Prm1P02319 51 aa4.84□□□□□ -1.63
Casc4-202ENSMUST00000089912 Gm9789Q8BIG3 52 aa4.83□□□□□ -1.64
Casc4-202ENSMUST00000089912 Gm7735D3YX18 52 aa4.8□□□□□ -1.64
Casc4-202ENSMUST00000089912 Gm10272F7CZ33 110 aa4.78□□□□□ -1.64
Casc4-202ENSMUST00000089912 Syne1Q6ZWR6 8799 aa4.75□□□□□ -1.65
Casc4-202ENSMUST00000089912 4933428G20RikQ9D3X4 101 aa4.75□□□□□ -1.65
Casc4-202ENSMUST00000089912 Lce1eQ9D139 143 aa4.64□□□□□ -1.67
Casc4-202ENSMUST00000089912 Gm10061D3Z714 54 aa4.59□□□□□ -1.68
Casc4-202ENSMUST00000089912 Muc16A0A140LJ72 8478 aa4.57□□□□□ -1.68
Casc4-202ENSMUST00000089912 Gm10100J3QK64 120 aa4.53□□□□□ -1.68
Casc4-202ENSMUST00000089912 Krtap22-2J3QNX6 67 aa4.53□□□□□ -1.68
Casc4-202ENSMUST00000089912 Sprr2gO70558 76 aa4.53□□□□□ -1.68
Casc4-202ENSMUST00000089912 Gm11938Q9D3H4 131 aa4.53□□□□□ -1.68
Casc4-202ENSMUST00000089912 Lce1cQ9D1C5 147 aa4.51□□□□□ -1.69
Casc4-202ENSMUST00000089912 Muc5bE9Q5I3 4800 aa4.5□□□□□ -1.69
Casc4-202ENSMUST00000089912 Lce3bQ9CQM7 98 aa4.46□□□□□ -1.7
Casc4-202ENSMUST00000089912 Gm10142J3KMP7 120 aa4.37□□□□□ -1.71
Casc4-202ENSMUST00000089912 Fsip2A2ARZ3 6995 aa4.35□□□□□ -1.71
Casc4-202ENSMUST00000089912 Lce1fB9EJP6 147 aa4.34□□□□□ -1.71
Casc4-202ENSMUST00000089912 Lce1a1Q9CQH5 143 aa4.34□□□□□ -1.71
Casc4-202ENSMUST00000089912 Gm11569B1AQB1 180 aa4.33□□□□□ -1.72
Casc4-202ENSMUST00000089912 Lce3cQ91V05 98 aa4.32□□□□□ -1.72
Casc4-202ENSMUST00000089912 Sprr2dO70555 85 aa4.31□□□□□ -1.72
Casc4-202ENSMUST00000089912 Lce3dE9Q8V1 98 aa4.26□□□□□ -1.73
Casc4-202ENSMUST00000089912 Krtap4-2B1AQ85 167 aa4.2□□□□□ -1.74
Casc4-202ENSMUST00000089912 Gm38119A0A0A6YX29 146 aa4.19□□□□□ -1.74
Casc4-202ENSMUST00000089912 Syne2Q6ZWQ0 6874 aaKnown RBP4.18□□□□□ -1.74
Casc4-202ENSMUST00000089912 Lce3eF8VQJ0 98 aa4.18□□□□□ -1.74
Casc4-202ENSMUST00000089912 Lce3fQ6PAI4 98 aa4.18□□□□□ -1.74
Casc4-202ENSMUST00000089912 A0A1Y7VJH8 109 aa4.13□□□□□ -1.75
Casc4-202ENSMUST00000089912 Gm11562A0PK51 136 aa4.12□□□□□ -1.75
Retrieved 100 of 22,080 RNA–protein pairs in 94.4 ms