RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Dync2h1Q45VK7 4306 aa5.75□□□□□ -1.49
Col3a1-201ENSMUST00000087883 Gm19402J3QJV4 266 aa5.75□□□□□ -1.49
Col3a1-201ENSMUST00000087883 TnxbO35452 4006 aa5.75□□□□□ -1.49
Col3a1-201ENSMUST00000087883 Stard9Q80TF6 4561 aa5.74□□□□□ -1.49
Col3a1-201ENSMUST00000087883 Dnah9B1AR51 4484 aa5.74□□□□□ -1.49
Col3a1-201ENSMUST00000087883 Csmd3Q80T79 3707 aa5.73□□□□□ -1.49
Col3a1-201ENSMUST00000087883 Kmt2aP55200 3966 aa5.72□□□□□ -1.49
Col3a1-201ENSMUST00000087883 Dnah6E9Q0B6 4144 aa5.7□□□□□ -1.5
Col3a1-201ENSMUST00000087883 Dnah1E9Q8T7 4250 aa5.65□□□□□ -1.5
Col3a1-201ENSMUST00000087883 Dnah2P0C6F1 4456 aa5.64□□□□□ -1.51
Col3a1-201ENSMUST00000087883 LorP18165 486 aa5.64□□□□□ -1.51
Col3a1-201ENSMUST00000087883 ApobE9Q414 4505 aa5.63□□□□□ -1.51
Col3a1-201ENSMUST00000087883 Krtap12-1Q9Z287 130 aa5.63□□□□□ -1.51
Col3a1-201ENSMUST00000087883 PrkdcP97313 4128 aa5.58□□□□□ -1.52
Col3a1-201ENSMUST00000087883 Dync1h1Q9JHU4 4644 aaKnown RBP5.56□□□□□ -1.52
Col3a1-201ENSMUST00000087883 Sprr2kO70562 68 aa5.55□□□□□ -1.52
Col3a1-201ENSMUST00000087883 SacsQ9JLC8 4582 aa5.53□□□□□ -1.52
Col3a1-201ENSMUST00000087883 Pkd1O08852 4293 aa5.5□□□□□ -1.53
Col3a1-201ENSMUST00000087883 Gm18596A0A1W2P860 280 aa5.49□□□□□ -1.53
Col3a1-201ENSMUST00000087883 Lrp1bQ9JI18 4599 aa5.42□□□□□ -1.54
Col3a1-201ENSMUST00000087883 Hectd4E9Q2E4 4418 aa5.41□□□□□ -1.54
Col3a1-201ENSMUST00000087883 Fras1Q80T14 4010 aa5.29□□□□□ -1.56
Col3a1-201ENSMUST00000087883 Fat1A0A1L1SQU7 4645 aa5.25□□□□□ -1.57
Col3a1-201ENSMUST00000087883 Dnah7cA0A087WR13 4024 aa5.24□□□□□ -1.57
Col3a1-201ENSMUST00000087883 Sprr2gO70558 76 aa5.23□□□□□ -1.57
Col3a1-201ENSMUST00000087883 Gm10100J3QK64 120 aa5.23□□□□□ -1.57
Col3a1-201ENSMUST00000087883 Lce3bQ9CQM7 98 aa5.22□□□□□ -1.57
Col3a1-201ENSMUST00000087883 Dnah7aE9Q0T8 4024 aa5.2□□□□□ -1.58
Col3a1-201ENSMUST00000087883 Fat3Q8BNA6 4555 aa5.19□□□□□ -1.58
Col3a1-201ENSMUST00000087883 Fat2Q5F226 4351 aa5.18□□□□□ -1.58
Col3a1-201ENSMUST00000087883 Lce3cQ91V05 98 aa5.18□□□□□ -1.58
Col3a1-201ENSMUST00000087883 Gm10272F7CZ33 110 aa5.17□□□□□ -1.58
Col3a1-201ENSMUST00000087883 Mycbp2Q7TPH6 4711 aa5.16□□□□□ -1.58
Col3a1-201ENSMUST00000087883 Krtap9-5A2A5X3 358 aa5.15□□□□□ -1.58
Col3a1-201ENSMUST00000087883 Ryr1E9PZQ0 5035 aa5.14□□□□□ -1.59
Col3a1-201ENSMUST00000087883 Krtap16-3Q8C1I6 86 aa5.11□□□□□ -1.59
Col3a1-201ENSMUST00000087883 Gm10142J3KMP7 120 aa5.11□□□□□ -1.59
Col3a1-201ENSMUST00000087883 Ryr3A2AGL3 4863 aa5.1□□□□□ -1.59
Col3a1-201ENSMUST00000087883 Lce1mQ9CR91 182 aa5.09□□□□□ -1.59
Col3a1-201ENSMUST00000087883 Krtap19-3Q925H6 87 aa5.08□□□□□ -1.6
Col3a1-201ENSMUST00000087883 2310046K23RikA0A0A6YVW6 87 aa5.08□□□□□ -1.6
Col3a1-201ENSMUST00000087883 Lrp1Q91ZX7 4545 aaKnown RBP5.07□□□□□ -1.6
Col3a1-201ENSMUST00000087883 Dnah8Q91XQ0 4731 aa5.06□□□□□ -1.6
Col3a1-201ENSMUST00000087883 Lce3eF8VQJ0 98 aa5.05□□□□□ -1.6
Col3a1-201ENSMUST00000087883 Lce3fQ6PAI4 98 aa5.05□□□□□ -1.6
Col3a1-201ENSMUST00000087883 Ryr2E9Q401 4966 aaKnown RBP5.02□□□□□ -1.61
Col3a1-201ENSMUST00000087883 Vps13bQ80TY5 3993 aa5.01□□□□□ -1.61
Col3a1-201ENSMUST00000087883 Krtap19-1Q925H2 87 aa4.98□□□□□ -1.61
Col3a1-201ENSMUST00000087883 Lce3dE9Q8V1 98 aa4.98□□□□□ -1.61
Col3a1-201ENSMUST00000087883 Krtap22-2J3QNX6 67 aa4.91□□□□□ -1.62
Col3a1-201ENSMUST00000087883 Lce3aQ497I5 98 aa4.91□□□□□ -1.62
Col3a1-201ENSMUST00000087883 Mt2P02798 61 aa4.9□□□□□ -1.62
Col3a1-201ENSMUST00000087883 Pkhd1l1Q80ZA4 4249 aa4.88□□□□□ -1.63
Col3a1-201ENSMUST00000087883 Herc2Q4U2R1 4836 aa4.84□□□□□ -1.63
Col3a1-201ENSMUST00000087883 Sprr2iO70560 76 aa4.8□□□□□ -1.64
Col3a1-201ENSMUST00000087883 Prm1P02319 51 aa4.8□□□□□ -1.64
Col3a1-201ENSMUST00000087883 Gm38119A0A0A6YX29 146 aa4.79□□□□□ -1.64
Col3a1-201ENSMUST00000087883 Lce1jD3YUU5 139 aa4.79□□□□□ -1.64
Col3a1-201ENSMUST00000087883 Lce1gQ9D195 139 aa4.79□□□□□ -1.64
Col3a1-201ENSMUST00000087883 Lce1iQ9D6P5 149 aa4.79□□□□□ -1.64
Col3a1-201ENSMUST00000087883 Lce1hQ9D6R3 140 aa4.79□□□□□ -1.64
Col3a1-201ENSMUST00000087883 Pkhd1E9PZ36 4059 aa4.78□□□□□ -1.64
Col3a1-201ENSMUST00000087883 Kiaa1109A2AAE1 5005 aa4.77□□□□□ -1.65
Col3a1-201ENSMUST00000087883 Lrp2A2ARV4 4660 aa4.77□□□□□ -1.65
Col3a1-201ENSMUST00000087883 Krtap1-3A2A588 173 aa4.75□□□□□ -1.65
Col3a1-201ENSMUST00000087883 Krtap19-2Q925I0 141 aa4.74□□□□□ -1.65
Col3a1-201ENSMUST00000087883 Gm10024A0A0A0MQA4 119 aa4.73□□□□□ -1.65
Col3a1-201ENSMUST00000087883 Dnhd1D3Z2X2 4750 aa4.67□□□□□ -1.66
Col3a1-201ENSMUST00000087883 HydinQ80W93 5154 aa4.66□□□□□ -1.66
Col3a1-201ENSMUST00000087883 Gm7735D3YX18 52 aa4.65□□□□□ -1.67
Col3a1-201ENSMUST00000087883 Lce1fB9EJP6 147 aa4.64□□□□□ -1.67
Col3a1-201ENSMUST00000087883 Lce1cQ9D1C5 147 aa4.64□□□□□ -1.67
Col3a1-201ENSMUST00000087883 Lce1lQ9D1G7 135 aa4.64□□□□□ -1.67
Col3a1-201ENSMUST00000087883 Lce1dQ9D731 133 aa4.64□□□□□ -1.67
Col3a1-201ENSMUST00000087883 Kmt2cQ8BRH4 4903 aa4.63□□□□□ -1.67
Col3a1-201ENSMUST00000087883 Krtap9-3Q3V2C1 136 aa4.63□□□□□ -1.67
Col3a1-201ENSMUST00000087883 Gm9789Q8BIG3 52 aa4.63□□□□□ -1.67
Col3a1-201ENSMUST00000087883 Herc1E9PZP8 4859 aa4.62□□□□□ -1.67
Col3a1-201ENSMUST00000087883 Birc6O88738 4882 aa4.61□□□□□ -1.67
Col3a1-201ENSMUST00000087883 Lce1bQ9D149 137 aa4.59□□□□□ -1.68
Col3a1-201ENSMUST00000087883 Lce1eQ9D139 143 aa4.59□□□□□ -1.68
Col3a1-201ENSMUST00000087883 Sprr2eO70556 76 aa4.58□□□□□ -1.68
Col3a1-201ENSMUST00000087883 Krtap19-4Q925H7 84 aa4.57□□□□□ -1.68
Col3a1-201ENSMUST00000087883 Abca13Q5SSE9 5034 aa4.51□□□□□ -1.69
Col3a1-201ENSMUST00000087883 Sprr2fO70557 76 aa4.46□□□□□ -1.7
Col3a1-201ENSMUST00000087883 Gm10061D3Z714 54 aa4.41□□□□□ -1.7
Col3a1-201ENSMUST00000087883 PcloQ9QYX7 5068 aa4.39□□□□□ -1.71
Col3a1-201ENSMUST00000087883 A0A1Y7VLE6 161 aa4.38□□□□□ -1.71
Col3a1-201ENSMUST00000087883 Gm11569B1AQB1 180 aa4.31□□□□□ -1.72
Col3a1-201ENSMUST00000087883 Lce1a2Q9D1K4 149 aa4.28□□□□□ -1.72
Col3a1-201ENSMUST00000087883 Krtap31-1Q9D644 177 aa4.26□□□□□ -1.73
Col3a1-201ENSMUST00000087883 Mt4P47945 62 aa4.23□□□□□ -1.73
Col3a1-201ENSMUST00000087883 Sprr2hO70559 108 aa4.2□□□□□ -1.74
Col3a1-201ENSMUST00000087883 Krtap17-1A2A5X6 109 aa4.15□□□□□ -1.75
Col3a1-201ENSMUST00000087883 ZanO88799 5376 aa4.14□□□□□ -1.75
Col3a1-201ENSMUST00000087883 Sprr2dO70555 85 aa4.12□□□□□ -1.75
Col3a1-201ENSMUST00000087883 Fat4Q2PZL6 4981 aa4.12□□□□□ -1.75
Col3a1-201ENSMUST00000087883 4932415D10RikA0A1W2P6U8 4986 aa4.11□□□□□ -1.75
Col3a1-201ENSMUST00000087883 Syne1Q6ZWR6 8799 aa4.1□□□□□ -1.75
Col3a1-201ENSMUST00000087883 Hmcn2A2AJ76 5100 aa4.09□□□□□ -1.75
Retrieved 100 of 22,080 RNA–protein pairs in 74.6 ms