RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Spink7Q6IE32 76 aa3.66□□□□□ -1.82
Col6a6-201ENSMUST00000060896 Mycbp2Q7TPH6 4711 aa3.66□□□□□ -1.82
Col6a6-201ENSMUST00000060896 Krtap19-5O08632 62 aa3.65□□□□□ -1.83
Col6a6-201ENSMUST00000060896 Rpl37Q9D823 97 aa3.65□□□□□ -1.83
Col6a6-201ENSMUST00000060896 PcloQ9QYX7 5068 aa3.63□□□□□ -1.83
Col6a6-201ENSMUST00000060896 Gm10318A0A1W2P728 225 aa3.61□□□□□ -1.83
Col6a6-201ENSMUST00000060896 A930033H14RikG5E8X6 103 aa3.61□□□□□ -1.83
Col6a6-201ENSMUST00000060896 Gm9112A2AI92 75 aa3.6□□□□□ -1.83
Col6a6-201ENSMUST00000060896 Gm20537G3UYK7 97 aa3.57□□□□□ -1.84
Col6a6-201ENSMUST00000060896 HydinQ80W93 5154 aa3.56□□□□□ -1.84
Col6a6-201ENSMUST00000060896 Fam229aB2KGE5 128 aa3.56□□□□□ -1.84
Col6a6-201ENSMUST00000060896 BC029722A0A0N4SW31 51 aa3.56□□□□□ -1.84
Col6a6-201ENSMUST00000060896 Birc6O88738 4882 aa3.53□□□□□ -1.84
Col6a6-201ENSMUST00000060896 Fat3Q8BNA6 4555 aa3.53□□□□□ -1.84
Col6a6-201ENSMUST00000060896 Crct1Q6PAI5 102 aa3.53□□□□□ -1.85
Col6a6-201ENSMUST00000060896 Dnah8Q91XQ0 4731 aa3.52□□□□□ -1.85
Col6a6-201ENSMUST00000060896 Gm19426M0QWC7 77 aa3.51□□□□□ -1.85
Col6a6-201ENSMUST00000060896 Kiaa1109A2AAE1 5005 aa3.46□□□□□ -1.86
Col6a6-201ENSMUST00000060896 Krtap4-1Q3UUY3 169 aa3.45□□□□□ -1.86
Col6a6-201ENSMUST00000060896 Lrp2A2ARV4 4660 aa3.42□□□□□ -1.86
Col6a6-201ENSMUST00000060896 Gm17416Q30KP4 66 aa3.41□□□□□ -1.86
Col6a6-201ENSMUST00000060896 Camk2n1Q6QWF9 78 aa3.41□□□□□ -1.86
Col6a6-201ENSMUST00000060896 Herc2Q4U2R1 4836 aa3.41□□□□□ -1.86
Col6a6-201ENSMUST00000060896 Dnhd1D3Z2X2 4750 aa3.39□□□□□ -1.87
Col6a6-201ENSMUST00000060896 Krtap31-2Q8CAY5 177 aa3.38□□□□□ -1.87
Col6a6-201ENSMUST00000060896 Krtap3-1A2A591 98 aa3.38□□□□□ -1.87
Col6a6-201ENSMUST00000060896 Krtap13-1Q8K198 168 aa3.38□□□□□ -1.87
Col6a6-201ENSMUST00000060896 B930094E09RikQ8C4T2 136 aa3.35□□□□□ -1.87
Col6a6-201ENSMUST00000060896 Lce1mQ9CR91 182 aa3.34□□□□□ -1.87
Col6a6-201ENSMUST00000060896 Herc1E9PZP8 4859 aa3.34□□□□□ -1.88
Col6a6-201ENSMUST00000060896 Krtap31-1Q9D644 177 aa3.33□□□□□ -1.88
Col6a6-201ENSMUST00000060896 Lce1jD3YUU5 139 aa3.25□□□□□ -1.89
Col6a6-201ENSMUST00000060896 Gm18596A0A1W2P860 280 aa3.23□□□□□ -1.89
Col6a6-201ENSMUST00000060896 Gm11563B1AQ90 168 aa3.2□□□□□ -1.9
Col6a6-201ENSMUST00000060896 Krtap4-7Q9D732 168 aa3.2□□□□□ -1.9
Col6a6-201ENSMUST00000060896 Prm1P02319 51 aa3.2□□□□□ -1.9
Col6a6-201ENSMUST00000060896 Hmcn2A2AJ76 5100 aa3.19□□□□□ -1.9
Col6a6-201ENSMUST00000060896 Gm40193A0A1B0GT39 78 aa3.18□□□□□ -1.9
Col6a6-201ENSMUST00000060896 Ubr4A2AN08 5180 aa3.17□□□□□ -1.9
Col6a6-201ENSMUST00000060896 LorP18165 486 aa3.16□□□□□ -1.9
Col6a6-201ENSMUST00000060896 Ush2AQ2QI47 5193 aa3.16□□□□□ -1.9
Col6a6-201ENSMUST00000060896 Gm19402J3QJV4 266 aa3.15□□□□□ -1.91
Col6a6-201ENSMUST00000060896 Gm19668J3QMD1 248 aa3.14□□□□□ -1.91
Col6a6-201ENSMUST00000060896 ZanO88799 5376 aa3.12□□□□□ -1.91
Col6a6-201ENSMUST00000060896 Krtap1-5A2A590 122 aa3.11□□□□□ -1.91
Col6a6-201ENSMUST00000060896 Gm7735D3YX18 52 aa3.1□□□□□ -1.91
Col6a6-201ENSMUST00000060896 Krtap7-1Q9D3I6 87 aa3.09□□□□□ -1.91
Col6a6-201ENSMUST00000060896 Krtap16-3Q8C1I6 86 aa3.09□□□□□ -1.92
Col6a6-201ENSMUST00000060896 Gm17402F6Z0L5 76 aa3.08□□□□□ -1.92
Col6a6-201ENSMUST00000060896 Lce1bQ9D149 137 aa3.08□□□□□ -1.92
Col6a6-201ENSMUST00000060896 4932415D10RikA0A1W2P6U8 4986 aa3.07□□□□□ -1.92
Col6a6-201ENSMUST00000060896 Gm9789Q8BIG3 52 aa3.07□□□□□ -1.92
Col6a6-201ENSMUST00000060896 Fat4Q2PZL6 4981 aa3.05□□□□□ -1.92
Col6a6-201ENSMUST00000060896 Krtap19-3Q925H6 87 aa3.04□□□□□ -1.92
Col6a6-201ENSMUST00000060896 Lce1hQ9D6R3 140 aa3.04□□□□□ -1.92
Col6a6-201ENSMUST00000060896 Tnp1P10856 55 aa3.03□□□□□ -1.92
Col6a6-201ENSMUST00000060896 Krtap1-4Q3V2D6 188 aa3.03□□□□□ -1.92
Col6a6-201ENSMUST00000060896 Krtap4-2B1AQ85 167 aa3.03□□□□□ -1.92
Col6a6-201ENSMUST00000060896 Sprr2a3Q4KL71 83 aa3.01□□□□□ -1.93
Col6a6-201ENSMUST00000060896 Krtap19-1Q925H2 87 aa3.01□□□□□ -1.93
Col6a6-201ENSMUST00000060896 Sprr2a1Q9CQK8 83 aa3.01□□□□□ -1.93
Col6a6-201ENSMUST00000060896 Gm11555B1AQ89 175 aa2.97□□□□□ -1.93
Col6a6-201ENSMUST00000060896 Rnf213E9Q555 5152 aaKnown RBP2.97□□□□□ -1.93
Col6a6-201ENSMUST00000060896 Krtap12-1Q9Z287 130 aa2.94□□□□□ -1.94
Col6a6-201ENSMUST00000060896 Krtap19-9aF8WH65 55 aa2.93□□□□□ -1.94
Col6a6-201ENSMUST00000060896 Krtap1-3A2A588 173 aa2.91□□□□□ -1.94
Col6a6-201ENSMUST00000060896 Krtap17-1A2A5X6 109 aa2.91□□□□□ -1.94
Col6a6-201ENSMUST00000060896 Mdn1A2ANY6 5589 aaKnown RBP2.91□□□□□ -1.94
Col6a6-201ENSMUST00000060896 Lce1eQ9D139 143 aa2.84□□□□□ -1.95
Col6a6-201ENSMUST00000060896 Krtap9-5A2A5X3 358 aa2.84□□□□□ -1.96
Col6a6-201ENSMUST00000060896 SspoQ8CG65 4998 aa2.79□□□□□ -1.96
Col6a6-201ENSMUST00000060896 Krtap19-9bQ99NG9 58 aa2.75□□□□□ -1.97
Col6a6-201ENSMUST00000060896 Krtap19-2Q925I0 141 aa2.75□□□□□ -1.97
Col6a6-201ENSMUST00000060896 Gm6358A0A087WPH4 74 aa2.74□□□□□ -1.97
Col6a6-201ENSMUST00000060896 Gm11562A0PK51 136 aa2.73□□□□□ -1.97
Col6a6-201ENSMUST00000060896 Gm10061D3Z714 54 aa2.72□□□□□ -1.97
Col6a6-201ENSMUST00000060896 Krtap8-1O08633 61 aa2.69□□□□□ -1.98
Col6a6-201ENSMUST00000060896 Gm38119A0A0A6YX29 146 aa2.68□□□□□ -1.98
Col6a6-201ENSMUST00000060896 Gm11559Q9D3H7 191 aa2.67□□□□□ -1.98
Col6a6-201ENSMUST00000060896 Mt2P02798 61 aa2.66□□□□□ -1.98
Col6a6-201ENSMUST00000060896 Lce1iQ9D6P5 149 aa2.66□□□□□ -1.98
Col6a6-201ENSMUST00000060896 Lce1a2Q9D1K4 149 aa2.64□□□□□ -1.99
Col6a6-201ENSMUST00000060896 Gm11569B1AQB1 180 aa2.63□□□□□ -1.99
Col6a6-201ENSMUST00000060896 Krtap9-3Q3V2C1 136 aa2.56□□□□□ -2
Col6a6-201ENSMUST00000060896 Lce1gQ9D195 139 aa2.56□□□□□ -2
Col6a6-201ENSMUST00000060896 Gm10272F7CZ33 110 aa2.55□□□□□ -2
Col6a6-201ENSMUST00000060896 Muc5bE9Q5I3 4800 aa2.54□□□□□ -2
Col6a6-201ENSMUST00000060896 Syne1Q6ZWR6 8799 aa2.53□□□□□ -2
Col6a6-201ENSMUST00000060896 Krtap22-2J3QNX6 67 aa2.53□□□□□ -2
Col6a6-201ENSMUST00000060896 4933428G20RikQ9D3X4 101 aa2.51□□□□□ -2.01
Col6a6-201ENSMUST00000060896 Sprr2kO70562 68 aa2.49□□□□□ -2.01
Col6a6-201ENSMUST00000060896 Fsip2A2ARZ3 6995 aa2.47□□□□□ -2.01
Col6a6-201ENSMUST00000060896 2310046K23RikA0A0A6YVW6 87 aa2.46□□□□□ -2.02
Col6a6-201ENSMUST00000060896 Gm11596B1AQB0 205 aa2.43□□□□□ -2.02
Col6a6-201ENSMUST00000060896 Krtap4-6Q3V4B7 195 aa2.42□□□□□ -2.02
Col6a6-201ENSMUST00000060896 Muc16A0A140LJ72 8478 aa2.42□□□□□ -2.02
Col6a6-201ENSMUST00000060896 Lce3bQ9CQM7 98 aa2.39□□□□□ -2.03
Col6a6-201ENSMUST00000060896 Gm10100J3QK64 120 aa2.36□□□□□ -2.03
Col6a6-201ENSMUST00000060896 Mt4P47945 62 aa2.35□□□□□ -2.03
Col6a6-201ENSMUST00000060896 Syne2Q6ZWQ0 6874 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 22,080 RNA–protein pairs in 6.9 ms