RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 Gm9789Q8BIG3 52 aa7.7□□□□□ -1.18
Trim3-201ENSMUST00000057525 Gm7735D3YX18 52 aa7.67□□□□□ -1.18
Trim3-201ENSMUST00000057525 SptssbQ925E8 76 aa7.67□□□□□ -1.18
Trim3-201ENSMUST00000057525 Prm1P02319 51 aa7.66□□□□□ -1.18
Trim3-201ENSMUST00000057525 Phxr4P15974 95 aa7.66□□□□□ -1.18
Trim3-201ENSMUST00000057525 Krtap16-3Q8C1I6 86 aa7.66□□□□□ -1.18
Trim3-201ENSMUST00000057525 Krtap1-3A2A588 173 aa7.61□□□□□ -1.19
Trim3-201ENSMUST00000057525 Krtap13-1Q8K198 168 aa7.6□□□□□ -1.19
Trim3-201ENSMUST00000057525 Cox6b2Q80ZN9 88 aa7.59□□□□□ -1.19
Trim3-201ENSMUST00000057525 1700042G07RikB1AUF7 90 aa7.57□□□□□ -1.2
Trim3-201ENSMUST00000057525 Krtap19-1Q925H2 87 aa7.57□□□□□ -1.2
Trim3-201ENSMUST00000057525 Krtap19-3Q925H6 87 aa7.57□□□□□ -1.2
Trim3-201ENSMUST00000057525 Fat4Q2PZL6 4981 aa7.55□□□□□ -1.2
Trim3-201ENSMUST00000057525 2210017I01RikA0A0A6YVV1 95 aa7.54□□□□□ -1.2
Trim3-201ENSMUST00000057525 Fam229aB2KGE5 128 aa7.52□□□□□ -1.21
Trim3-201ENSMUST00000057525 LorP18165 486 aa7.51□□□□□ -1.21
Trim3-201ENSMUST00000057525 Krtap3-1A2A591 98 aa7.48□□□□□ -1.21
Trim3-201ENSMUST00000057525 Gm17606F6ZL36 78 aa7.48□□□□□ -1.21
Trim3-201ENSMUST00000057525 Gm10382Q3V0T5 144 aa7.47□□□□□ -1.21
Trim3-201ENSMUST00000057525 Uqcr11Q9CPX8 56 aa7.46□□□□□ -1.22
Trim3-201ENSMUST00000057525 Rnf213E9Q555 5152 aaKnown RBP7.43□□□□□ -1.22
Trim3-201ENSMUST00000057525 Ndufb1P0DN34 57 aa7.4□□□□□ -1.23
Trim3-201ENSMUST00000057525 Gm19402J3QJV4 266 aa7.39□□□□□ -1.23
Trim3-201ENSMUST00000057525 Limd2Q8BGB5 128 aa7.38□□□□□ -1.23
Trim3-201ENSMUST00000057525 4933415A04RikQ9D443 101 aa7.36□□□□□ -1.23
Trim3-201ENSMUST00000057525 Krtap1-5A2A590 122 aa7.36□□□□□ -1.23
Trim3-201ENSMUST00000057525 Gm21887J3QQ04 176 aa7.31□□□□□ -1.24
Trim3-201ENSMUST00000057525 BC029722A0A0N4SW31 51 aa7.19□□□□□ -1.26
Trim3-201ENSMUST00000057525 Prm2P07978 107 aa7.19□□□□□ -1.26
Trim3-201ENSMUST00000057525 Gm20538F6Z9R1 75 aa7.19□□□□□ -1.26
Trim3-201ENSMUST00000057525 Gm12216A0A1W2P827 62 aa7.18□□□□□ -1.26
Trim3-201ENSMUST00000057525 Gm19426M0QWC7 77 aa7.16□□□□□ -1.26
Trim3-201ENSMUST00000057525 Krtap1-4Q3V2D6 188 aa7.14□□□□□ -1.27
Trim3-201ENSMUST00000057525 Gm3646F6S692 53 aa7.11□□□□□ -1.27
Trim3-201ENSMUST00000057525 Gm20537G3UYK7 97 aa7.09□□□□□ -1.27
Trim3-201ENSMUST00000057525 Gm9955Q8CEJ8 102 aa7.08□□□□□ -1.28
Trim3-201ENSMUST00000057525 Mp68P56379 58 aa7.03□□□□□ -1.28
Trim3-201ENSMUST00000057525 Ndufs5Q99LY9 106 aa7.03□□□□□ -1.28
Trim3-201ENSMUST00000057525 Spink7Q6IE32 76 aa7.03□□□□□ -1.28
Trim3-201ENSMUST00000057525 Lce1jD3YUU5 139 aa6.99□□□□□ -1.29
Trim3-201ENSMUST00000057525 SspoQ8CG65 4998 aa6.99□□□□□ -1.29
Trim3-201ENSMUST00000057525 Gm3880A0A1B0GSB3 72 aa6.94□□□□□ -1.3
Trim3-201ENSMUST00000057525 Krtap17-1A2A5X6 109 aa6.94□□□□□ -1.3
Trim3-201ENSMUST00000057525 Gm10061D3Z714 54 aa6.93□□□□□ -1.3
Trim3-201ENSMUST00000057525 Krtap12-1Q9Z287 130 aa6.87□□□□□ -1.31
Trim3-201ENSMUST00000057525 B930094E09RikQ8C4T2 136 aa6.77□□□□□ -1.33
Trim3-201ENSMUST00000057525 Krtap9-5A2A5X3 358 aa6.76□□□□□ -1.33
Trim3-201ENSMUST00000057525 Krtap19-2Q925I0 141 aa6.75□□□□□ -1.33
Trim3-201ENSMUST00000057525 Krtap19-9aF8WH65 55 aa6.74□□□□□ -1.33
Trim3-201ENSMUST00000057525 Pla2g10Q9QXX3 151 aa6.74□□□□□ -1.33
Trim3-201ENSMUST00000057525 CriptO70333 101 aa6.72□□□□□ -1.33
Trim3-201ENSMUST00000057525 Sprr2a3Q4KL71 83 aa6.71□□□□□ -1.34
Trim3-201ENSMUST00000057525 Sprr2a1Q9CQK8 83 aa6.71□□□□□ -1.34
Trim3-201ENSMUST00000057525 Gm11569B1AQB1 180 aa6.67□□□□□ -1.34
Trim3-201ENSMUST00000057525 Gm17402F6Z0L5 76 aa6.64□□□□□ -1.35
Trim3-201ENSMUST00000057525 Romo1P60603 79 aa6.64□□□□□ -1.35
Trim3-201ENSMUST00000057525 Mdn1A2ANY6 5589 aaKnown RBP6.55□□□□□ -1.36
Trim3-201ENSMUST00000057525 Muc5bE9Q5I3 4800 aa6.53□□□□□ -1.36
Trim3-201ENSMUST00000057525 Lce1iQ9D6P5 149 aa6.53□□□□□ -1.36
Trim3-201ENSMUST00000057525 Lce1a2Q9D1K4 149 aa6.45□□□□□ -1.38
Trim3-201ENSMUST00000057525 Gm19668J3QMD1 248 aa6.42□□□□□ -1.38
Trim3-201ENSMUST00000057525 Gm6358A0A087WPH4 74 aa6.4□□□□□ -1.38
Trim3-201ENSMUST00000057525 Camk2n1Q6QWF9 78 aa6.35□□□□□ -1.39
Trim3-201ENSMUST00000057525 Ndufaf8A2AMZ4 74 aa6.35□□□□□ -1.39
Trim3-201ENSMUST00000057525 Krtap4-2B1AQ85 167 aa6.23□□□□□ -1.41
Trim3-201ENSMUST00000057525 Mt2P02798 61 aa6.23□□□□□ -1.41
Trim3-201ENSMUST00000057525 Gm9112A2AI92 75 aa6.19□□□□□ -1.42
Trim3-201ENSMUST00000057525 Lce1gQ9D195 139 aa6.18□□□□□ -1.42
Trim3-201ENSMUST00000057525 Krtap4-6Q3V4B7 195 aa6.16□□□□□ -1.42
Trim3-201ENSMUST00000057525 Syne2Q6ZWQ0 6874 aaKnown RBP6.14□□□□□ -1.43
Trim3-201ENSMUST00000057525 Gm11555B1AQ89 175 aa6.07□□□□□ -1.44
Trim3-201ENSMUST00000057525 Krtap8-1O08633 61 aa6.03□□□□□ -1.44
Trim3-201ENSMUST00000057525 Krtap4-1Q3UUY3 169 aa6.02□□□□□ -1.45
Trim3-201ENSMUST00000057525 Krtap19-9bQ99NG9 58 aa6.02□□□□□ -1.45
Trim3-201ENSMUST00000057525 Gm11596B1AQB0 205 aa6.01□□□□□ -1.45
Trim3-201ENSMUST00000057525 Fsip2A2ARZ3 6995 aa5.91□□□□□ -1.46
Trim3-201ENSMUST00000057525 Krtap7-1Q9D3I6 87 aa5.88□□□□□ -1.47
Trim3-201ENSMUST00000057525 Krtap22-2J3QNX6 67 aa5.87□□□□□ -1.47
Trim3-201ENSMUST00000057525 Krtap9-3Q3V2C1 136 aa5.87□□□□□ -1.47
Trim3-201ENSMUST00000057525 Gm11562A0PK51 136 aa5.85□□□□□ -1.47
Trim3-201ENSMUST00000057525 Gm11564A2A4L9 201 aa5.84□□□□□ -1.47
Trim3-201ENSMUST00000057525 Gm11563B1AQ90 168 aa5.84□□□□□ -1.47
Trim3-201ENSMUST00000057525 Gm11595B1AQA7 289 aa5.84□□□□□ -1.47
Trim3-201ENSMUST00000057525 Krtap4-8B1AQA8 209 aa5.84□□□□□ -1.47
Trim3-201ENSMUST00000057525 Lce1hQ9D6R3 140 aa5.76□□□□□ -1.49
Trim3-201ENSMUST00000057525 Mt4P47945 62 aa5.73□□□□□ -1.49
Trim3-201ENSMUST00000057525 Krtap4-9B1AQA9 244 aa5.71□□□□□ -1.5
Trim3-201ENSMUST00000057525 Gm40193A0A1B0GT39 78 aa5.69□□□□□ -1.5
Trim3-201ENSMUST00000057525 Tnp1P10856 55 aa5.64□□□□□ -1.51
Trim3-201ENSMUST00000057525 Gm38119A0A0A6YX29 146 aa5.57□□□□□ -1.52
Trim3-201ENSMUST00000057525 Krtap4-13Q9D7P3 165 aa5.53□□□□□ -1.52
Trim3-201ENSMUST00000057525 Lce1bQ9D149 137 aa5.44□□□□□ -1.54
Trim3-201ENSMUST00000057525 Gm10272F7CZ33 110 aa5.43□□□□□ -1.54
Trim3-201ENSMUST00000057525 Sprr2kO70562 68 aa5.42□□□□□ -1.54
Trim3-201ENSMUST00000057525 2300003K06RikA2A4M0 262 aa5.4□□□□□ -1.55
Trim3-201ENSMUST00000057525 Syne1Q6ZWR6 8799 aa5.35□□□□□ -1.55
Trim3-201ENSMUST00000057525 2310046K23RikA0A0A6YVW6 87 aa5.27□□□□□ -1.57
Trim3-201ENSMUST00000057525 Krtap4-7Q9D732 168 aa5.26□□□□□ -1.57
Trim3-201ENSMUST00000057525 Lce1lQ9D1G7 135 aa5.22□□□□□ -1.57
Trim3-201ENSMUST00000057525 Lce1dQ9D731 133 aa5.16□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 81 ms