RNA–Protein interactions for RNA: ENSMUST00000048065.5

Trem3-201, Transcript of TREM-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trem3, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3-201ENSMUST00000048065 Lce1eQ9D139 143 aa6.2□□□□□ -1.42
Trem3-201ENSMUST00000048065 Gm11596B1AQB0 205 aa6.19□□□□□ -1.42
Trem3-201ENSMUST00000048065 Samd13D3YUG0 102 aa6.19□□□□□ -1.42
Trem3-201ENSMUST00000048065 Lce1cQ9D1C5 147 aa6.19□□□□□ -1.42
Trem3-201ENSMUST00000048065 Fam229bQ8CF36 80 aa6.17□□□□□ -1.42
Trem3-201ENSMUST00000048065 Krtap31-1Q9D644 177 aa6.17□□□□□ -1.42
Trem3-201ENSMUST00000048065 Tmem254aP0DN89 123 aa6.15□□□□□ -1.42
Trem3-201ENSMUST00000048065 Tmem254bP0DN90 123 aa6.15□□□□□ -1.42
Trem3-201ENSMUST00000048065 Tmem254cP0DN91 123 aa6.15□□□□□ -1.42
Trem3-201ENSMUST00000048065 Muc5bE9Q5I3 4800 aa6.15□□□□□ -1.43
Trem3-201ENSMUST00000048065 Gm29735A0A1B0GT06 219 aa6.14□□□□□ -1.43
Trem3-201ENSMUST00000048065 Krtap1-5A2A590 122 aa6.14□□□□□ -1.43
Trem3-201ENSMUST00000048065 B930094E09RikQ8C4T2 136 aa6.14□□□□□ -1.43
Trem3-201ENSMUST00000048065 Lce1fB9EJP6 147 aa6.13□□□□□ -1.43
Trem3-201ENSMUST00000048065 Krtap4-6Q3V4B7 195 aa6.11□□□□□ -1.43
Trem3-201ENSMUST00000048065 Spink8Q09TK9 105 aa6.1□□□□□ -1.43
Trem3-201ENSMUST00000048065 Q8BGJ3 129 aa6.1□□□□□ -1.43
Trem3-201ENSMUST00000048065 Gm11567Q9D141 195 aa6.1□□□□□ -1.43
Trem3-201ENSMUST00000048065 Krtap9-5A2A5X3 358 aa6.08□□□□□ -1.44
Trem3-201ENSMUST00000048065 Gm10999F6Q4M4 69 aa6.08□□□□□ -1.44
Trem3-201ENSMUST00000048065 Gm11595B1AQA7 289 aa6.07□□□□□ -1.44
Trem3-201ENSMUST00000048065 Gm11559Q9D3H7 191 aa6.07□□□□□ -1.44
Trem3-201ENSMUST00000048065 Hist1h4aP62806 103 aaKnown RBP6.05□□□□□ -1.44
Trem3-201ENSMUST00000048065 Krtap19-2Q925I0 141 aa6.04□□□□□ -1.44
Trem3-201ENSMUST00000048065 2310079G19RikQ9D6L6 185 aa6.04□□□□□ -1.44
Trem3-201ENSMUST00000048065 Defb38Q7TNV7 63 aa6.03□□□□□ -1.44
Trem3-201ENSMUST00000048065 1700074P13RikQ9D9G7 251 aa6.03□□□□□ -1.44
Trem3-201ENSMUST00000048065 Mdn1A2ANY6 5589 aaKnown RBP6.03□□□□□ -1.44
Trem3-201ENSMUST00000048065 4930507D05RikQ8C9C9 103 aa6.02□□□□□ -1.45
Trem3-201ENSMUST00000048065 Gtf2h5Q8K2X8 71 aa6.02□□□□□ -1.45
Trem3-201ENSMUST00000048065 Pcp4l1Q6W8Q3 68 aa5.96□□□□□ -1.46
Trem3-201ENSMUST00000048065 Gm19426M0QWC7 77 aa5.95□□□□□ -1.46
Trem3-201ENSMUST00000048065 Gm10197F6QEY5 67 aa5.94□□□□□ -1.46
Trem3-201ENSMUST00000048065 Spint4Q9D263 159 aa5.94□□□□□ -1.46
Trem3-201ENSMUST00000048065 BatfO35284 125 aa5.92□□□□□ -1.46
Trem3-201ENSMUST00000048065 Krtap12-1Q9Z287 130 aa5.92□□□□□ -1.46
Trem3-201ENSMUST00000048065 Pla2g10Q9QXX3 151 aa5.89□□□□□ -1.47
Trem3-201ENSMUST00000048065 Bud31Q6PGH1 103 aa5.88□□□□□ -1.47
Trem3-201ENSMUST00000048065 Gm11564A2A4L9 201 aa5.87□□□□□ -1.47
Trem3-201ENSMUST00000048065 Krtap4-8B1AQA8 209 aa5.87□□□□□ -1.47
Trem3-201ENSMUST00000048065 Ndufc1Q9CQY9 76 aa5.87□□□□□ -1.47
Trem3-201ENSMUST00000048065 Pxt1Q8K459 51 aa5.86□□□□□ -1.47
Trem3-201ENSMUST00000048065 Gm21798J3QNU5 87 aa5.85□□□□□ -1.47
Trem3-201ENSMUST00000048065 Prm2P07978 107 aa5.81□□□□□ -1.48
Trem3-201ENSMUST00000048065 Defb1P56386 69 aa5.81□□□□□ -1.48
Trem3-201ENSMUST00000048065 Gm6358A0A087WPH4 74 aa5.8□□□□□ -1.48
Trem3-201ENSMUST00000048065 Gm10100J3QK64 120 aa5.79□□□□□ -1.48
Trem3-201ENSMUST00000048065 Gm17606F6ZL36 78 aa5.76□□□□□ -1.49
Trem3-201ENSMUST00000048065 Atox1O08997 68 aaKnown RBP5.76□□□□□ -1.49
Trem3-201ENSMUST00000048065 Gm10160F6Y577 67 aa5.74□□□□□ -1.49
Trem3-201ENSMUST00000048065 BC029722A0A0N4SW31 51 aa5.73□□□□□ -1.49
Trem3-201ENSMUST00000048065 Krtap19-9aF8WH65 55 aa5.73□□□□□ -1.49
Trem3-201ENSMUST00000048065 CriptO70333 101 aa5.72□□□□□ -1.49
Trem3-201ENSMUST00000048065 Gm10643Q3URG9 111 aa5.69□□□□□ -1.5
Trem3-201ENSMUST00000048065 Cox6b2Q80ZN9 88 aa5.69□□□□□ -1.5
Trem3-201ENSMUST00000048065 Gm20537G3UYK7 97 aa5.68□□□□□ -1.5
Trem3-201ENSMUST00000048065 SptssbQ925E8 76 aa5.66□□□□□ -1.5
Trem3-201ENSMUST00000048065 Coa6Q8BGD8 79 aa5.62□□□□□ -1.51
Trem3-201ENSMUST00000048065 Fam240bJ3QMB3 78 aa5.61□□□□□ -1.51
Trem3-201ENSMUST00000048065 Lce1iQ9D6P5 149 aa5.61□□□□□ -1.51
Trem3-201ENSMUST00000048065 Mt4P47945 62 aa5.6□□□□□ -1.51
Trem3-201ENSMUST00000048065 Spink7Q6IE32 76 aa5.6□□□□□ -1.51
Trem3-201ENSMUST00000048065 Gm10382Q3V0T5 144 aa5.57□□□□□ -1.52
Trem3-201ENSMUST00000048065 4930518I15RikQ3V2W7 57 aa5.57□□□□□ -1.52
Trem3-201ENSMUST00000048065 SmcpP15265 143 aa5.56□□□□□ -1.52
Trem3-201ENSMUST00000048065 Atp5eP56382 52 aa5.56□□□□□ -1.52
Trem3-201ENSMUST00000048065 Limd2Q8BGB5 128 aa5.52□□□□□ -1.53
Trem3-201ENSMUST00000048065 Lce1a2Q9D1K4 149 aa5.52□□□□□ -1.53
Trem3-201ENSMUST00000048065 B230307C23RikQ8BLB2 64 aa5.51□□□□□ -1.53
Trem3-201ENSMUST00000048065 Fsip2A2ARZ3 6995 aa5.51□□□□□ -1.53
Trem3-201ENSMUST00000048065 Gm10153A0A1B0GRL1 320 aa5.5□□□□□ -1.53
Trem3-201ENSMUST00000048065 Krtap4-13Q9D7P3 165 aa5.49□□□□□ -1.53
Trem3-201ENSMUST00000048065 Mt2P02798 61 aa5.48□□□□□ -1.53
Trem3-201ENSMUST00000048065 Serp2Q6TAW2 65 aa5.48□□□□□ -1.53
Trem3-201ENSMUST00000048065 Gm45213A0A0U1RNZ6 101 aa5.46□□□□□ -1.54
Trem3-201ENSMUST00000048065 Krtap9-3Q3V2C1 136 aa5.42□□□□□ -1.54
Trem3-201ENSMUST00000048065 Krtap6-3A0A087WQL6 57 aa5.4□□□□□ -1.54
Trem3-201ENSMUST00000048065 Krtap8-1O08633 61 aa5.4□□□□□ -1.54
Trem3-201ENSMUST00000048065 Coa5Q99M07 74 aa5.39□□□□□ -1.55
Trem3-201ENSMUST00000048065 Smim20D3Z7Q2 69 aa5.38□□□□□ -1.55
Trem3-201ENSMUST00000048065 Sprr2kO70562 68 aa5.36□□□□□ -1.55
Trem3-201ENSMUST00000048065 Krtap5-4Q62220 223 aa5.3□□□□□ -1.56
Trem3-201ENSMUST00000048065 Anapc13Q8R034 74 aa5.28□□□□□ -1.56
Trem3-201ENSMUST00000048065 2300003K06RikA2A4M0 262 aa5.27□□□□□ -1.57
Trem3-201ENSMUST00000048065 Gm45337A0A1B0GS71 263 aa5.25□□□□□ -1.57
Trem3-201ENSMUST00000048065 Sec61gP60060 68 aa5.25□□□□□ -1.57
Trem3-201ENSMUST00000048065 Smlr1J3QMJ4 66 aa5.24□□□□□ -1.57
Trem3-201ENSMUST00000048065 Gm20661K7N787 53 aa5.23□□□□□ -1.57
Trem3-201ENSMUST00000048065 Sprr2a3Q4KL71 83 aa5.23□□□□□ -1.57
Trem3-201ENSMUST00000048065 Sprr2a1Q9CQK8 83 aa5.23□□□□□ -1.57
Trem3-201ENSMUST00000048065 Gm17402F6Z0L5 76 aa5.22□□□□□ -1.57
Trem3-201ENSMUST00000048065 Serp1Q9Z1W5 66 aa5.21□□□□□ -1.58
Trem3-201ENSMUST00000048065 Krtap22-2J3QNX6 67 aa5.2□□□□□ -1.58
Trem3-201ENSMUST00000048065 Sox16Q62247 57 aa5.15□□□□□ -1.59
Trem3-201ENSMUST00000048065 Gm9955Q8CEJ8 102 aa5.15□□□□□ -1.59
Trem3-201ENSMUST00000048065 H2al1aQ5M8Q2 105 aa5.14□□□□□ -1.59
Trem3-201ENSMUST00000048065 H2al1eQ810S6 105 aa5.14□□□□□ -1.59
Trem3-201ENSMUST00000048065 Uqcr11Q9CPX8 56 aa5.11□□□□□ -1.59
Trem3-201ENSMUST00000048065 Pet100P0DJE0 76 aa5.09□□□□□ -1.59
Trem3-201ENSMUST00000048065 SnurfQ9WU12 71 aa5.05□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms