RNA–Protein interactions for RNA: ENSMUST00000028062.7

Vim-201, Transcript of Vimentin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Vim, Length 2,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vim-201ENSMUST00000028062 Herc2Q4U2R1 4836 aa8.21□□□□□ -1.09
Vim-201ENSMUST00000028062 Kiaa1109A2AAE1 5005 aa8.21□□□□□ -1.1
Vim-201ENSMUST00000028062 Birc6O88738 4882 aa8.18□□□□□ -1.1
Vim-201ENSMUST00000028062 HydinQ80W93 5154 aa8.03□□□□□ -1.12
Vim-201ENSMUST00000028062 Sec61bQ9CQS8 96 aaKnown RBP7.99□□□□□ -1.13
Vim-201ENSMUST00000028062 Krtap13-1Q8K198 168 aa7.98□□□□□ -1.13
Vim-201ENSMUST00000028062 Lrp2A2ARV4 4660 aa7.97□□□□□ -1.13
Vim-201ENSMUST00000028062 Gm12216A0A1W2P827 62 aa7.91□□□□□ -1.14
Vim-201ENSMUST00000028062 BC029722A0A0N4SW31 51 aa7.91□□□□□ -1.14
Vim-201ENSMUST00000028062 Romo1P60603 79 aa7.9□□□□□ -1.14
Vim-201ENSMUST00000028062 2310057N15RikQ9D6T8 200 aa7.89□□□□□ -1.15
Vim-201ENSMUST00000028062 Krtap1-5A2A590 122 aa7.86□□□□□ -1.15
Vim-201ENSMUST00000028062 B930094E09RikQ8C4T2 136 aa7.8□□□□□ -1.16
Vim-201ENSMUST00000028062 Gm17402F6Z0L5 76 aa7.75□□□□□ -1.17
Vim-201ENSMUST00000028062 CriptO70333 101 aa7.74□□□□□ -1.17
Vim-201ENSMUST00000028062 Gm19426M0QWC7 77 aa7.71□□□□□ -1.17
Vim-201ENSMUST00000028062 Fam229aB2KGE5 128 aa7.7□□□□□ -1.18
Vim-201ENSMUST00000028062 Krtap16-3Q8C1I6 86 aa7.69□□□□□ -1.18
Vim-201ENSMUST00000028062 PcloQ9QYX7 5068 aa7.67□□□□□ -1.18
Vim-201ENSMUST00000028062 Gm21887J3QQ04 176 aa7.63□□□□□ -1.19
Vim-201ENSMUST00000028062 Lce1mQ9CR91 182 aa7.63□□□□□ -1.19
Vim-201ENSMUST00000028062 Krtap19-1Q925H2 87 aa7.61□□□□□ -1.19
Vim-201ENSMUST00000028062 Krtap19-3Q925H6 87 aa7.54□□□□□ -1.2
Vim-201ENSMUST00000028062 Crct1Q6PAI5 102 aa7.53□□□□□ -1.2
Vim-201ENSMUST00000028062 Sprr2a3Q4KL71 83 aa7.52□□□□□ -1.21
Vim-201ENSMUST00000028062 Sprr2a1Q9CQK8 83 aa7.52□□□□□ -1.21
Vim-201ENSMUST00000028062 Gm10318A0A1W2P728 225 aa7.49□□□□□ -1.21
Vim-201ENSMUST00000028062 Gm19402J3QJV4 266 aa7.47□□□□□ -1.21
Vim-201ENSMUST00000028062 Herc1E9PZP8 4859 aa7.45□□□□□ -1.22
Vim-201ENSMUST00000028062 Spink7Q6IE32 76 aa7.44□□□□□ -1.22
Vim-201ENSMUST00000028062 A0A1Y7VJH8 109 aa7.35□□□□□ -1.23
Vim-201ENSMUST00000028062 Krtap1-4Q3V2D6 188 aa7.35□□□□□ -1.23
Vim-201ENSMUST00000028062 Gm18596A0A1W2P860 280 aa7.33□□□□□ -1.24
Vim-201ENSMUST00000028062 Krtap7-1Q9D3I6 87 aa7.27□□□□□ -1.24
Vim-201ENSMUST00000028062 Krtap1-3A2A588 173 aa7.25□□□□□ -1.25
Vim-201ENSMUST00000028062 Mp68P56379 58 aa7.22□□□□□ -1.25
Vim-201ENSMUST00000028062 Ush2AQ2QI47 5193 aa7.21□□□□□ -1.25
Vim-201ENSMUST00000028062 Hmcn2A2AJ76 5100 aa7.21□□□□□ -1.25
Vim-201ENSMUST00000028062 Gm40193A0A1B0GT39 78 aa7.2□□□□□ -1.26
Vim-201ENSMUST00000028062 ZanO88799 5376 aa7.19□□□□□ -1.26
Vim-201ENSMUST00000028062 4932415D10RikA0A1W2P6U8 4986 aa7.19□□□□□ -1.26
Vim-201ENSMUST00000028062 Gm20538F6Z9R1 75 aa7.16□□□□□ -1.26
Vim-201ENSMUST00000028062 Gm9789Q8BIG3 52 aa7.12□□□□□ -1.27
Vim-201ENSMUST00000028062 Prm1P02319 51 aa7.1□□□□□ -1.27
Vim-201ENSMUST00000028062 Camk2n1Q6QWF9 78 aa7.1□□□□□ -1.27
Vim-201ENSMUST00000028062 Ubr4A2AN08 5180 aa7.07□□□□□ -1.28
Vim-201ENSMUST00000028062 Gm19668J3QMD1 248 aa7.05□□□□□ -1.28
Vim-201ENSMUST00000028062 Krtap28-10A0A1Y7VP58 119 aa7.05□□□□□ -1.28
Vim-201ENSMUST00000028062 Gm7735D3YX18 52 aa7.05□□□□□ -1.28
Vim-201ENSMUST00000028062 Lce1jD3YUU5 139 aa7.04□□□□□ -1.28
Vim-201ENSMUST00000028062 LorP18165 486 aa7.03□□□□□ -1.28
Vim-201ENSMUST00000028062 Krtap12-1Q9Z287 130 aa7.03□□□□□ -1.28
Vim-201ENSMUST00000028062 Krtap19-9aF8WH65 55 aa7.01□□□□□ -1.29
Vim-201ENSMUST00000028062 Fat4Q2PZL6 4981 aa6.96□□□□□ -1.29
Vim-201ENSMUST00000028062 Rnf213E9Q555 5152 aaKnown RBP6.94□□□□□ -1.3
Vim-201ENSMUST00000028062 Prm2P07978 107 aa6.8□□□□□ -1.32
Vim-201ENSMUST00000028062 A0A1Y7VLE6 161 aa6.78□□□□□ -1.32
Vim-201ENSMUST00000028062 Ndufaf8A2AMZ4 74 aa6.75□□□□□ -1.33
Vim-201ENSMUST00000028062 SspoQ8CG65 4998 aa6.71□□□□□ -1.34
Vim-201ENSMUST00000028062 Krtap17-1A2A5X6 109 aa6.68□□□□□ -1.34
Vim-201ENSMUST00000028062 Krtap28-13A0A087WQP5 138 aa6.67□□□□□ -1.34
Vim-201ENSMUST00000028062 Krtap19-2Q925I0 141 aa6.67□□□□□ -1.34
Vim-201ENSMUST00000028062 Krtap8-1O08633 61 aa6.65□□□□□ -1.34
Vim-201ENSMUST00000028062 Tnp1P10856 55 aa6.65□□□□□ -1.35
Vim-201ENSMUST00000028062 Lce1iQ9D6P5 149 aa6.62□□□□□ -1.35
Vim-201ENSMUST00000028062 Krtap9-5A2A5X3 358 aa6.6□□□□□ -1.35
Vim-201ENSMUST00000028062 A030005L19RikA0A1Y7VIU2 113 aa6.58□□□□□ -1.36
Vim-201ENSMUST00000028062 Lce1a2Q9D1K4 149 aa6.56□□□□□ -1.36
Vim-201ENSMUST00000028062 Krtap19-9bQ99NG9 58 aa6.55□□□□□ -1.36
Vim-201ENSMUST00000028062 A030005K14RikA0A1Y7VNY1 122 aa6.45□□□□□ -1.38
Vim-201ENSMUST00000028062 Gm10061D3Z714 54 aa6.4□□□□□ -1.39
Vim-201ENSMUST00000028062 Gm7544A0A1Y7VJ58 118 aa6.39□□□□□ -1.39
Vim-201ENSMUST00000028062 2310046K23RikA0A0A6YVW6 87 aa6.36□□□□□ -1.39
Vim-201ENSMUST00000028062 Muc5bE9Q5I3 4800 aa6.28□□□□□ -1.4
Vim-201ENSMUST00000028062 Gm6358A0A087WPH4 74 aa6.26□□□□□ -1.41
Vim-201ENSMUST00000028062 Krtap9-3Q3V2C1 136 aa6.23□□□□□ -1.41
Vim-201ENSMUST00000028062 Mt2P02798 61 aa6.22□□□□□ -1.41
Vim-201ENSMUST00000028062 Lce1hQ9D6R3 140 aa6.18□□□□□ -1.42
Vim-201ENSMUST00000028062 Gm11569B1AQB1 180 aa6.04□□□□□ -1.44
Vim-201ENSMUST00000028062 Gm9112A2AI92 75 aa5.99□□□□□ -1.45
Vim-201ENSMUST00000028062 Krtap22-2J3QNX6 67 aa5.86□□□□□ -1.47
Vim-201ENSMUST00000028062 A0A1Y7VJ07 166 aa5.79□□□□□ -1.48
Vim-201ENSMUST00000028062 Krtap4-2B1AQ85 167 aa5.74□□□□□ -1.49
Vim-201ENSMUST00000028062 Gm11562A0PK51 136 aa5.73□□□□□ -1.49
Vim-201ENSMUST00000028062 Lce1gQ9D195 139 aa5.7□□□□□ -1.5
Vim-201ENSMUST00000028062 Sprr2gO70558 76 aa5.68□□□□□ -1.5
Vim-201ENSMUST00000028062 Lce1dQ9D731 133 aa5.68□□□□□ -1.5
Vim-201ENSMUST00000028062 A030003K21RikA0A1Y7VIM3 128 aa5.67□□□□□ -1.5
Vim-201ENSMUST00000028062 Gm10272F7CZ33 110 aa5.64□□□□□ -1.51
Vim-201ENSMUST00000028062 Gm11555B1AQ89 175 aa5.63□□□□□ -1.51
Vim-201ENSMUST00000028062 Mdn1A2ANY6 5589 aaKnown RBP5.61□□□□□ -1.51
Vim-201ENSMUST00000028062 Sprr2dO70555 85 aa5.61□□□□□ -1.51
Vim-201ENSMUST00000028062 Krtap4-6Q3V4B7 195 aa5.53□□□□□ -1.52
Vim-201ENSMUST00000028062 4933428G20RikQ9D3X4 101 aa5.53□□□□□ -1.52
Vim-201ENSMUST00000028062 Lce1eQ9D139 143 aa5.52□□□□□ -1.53
Vim-201ENSMUST00000028062 Gm11938Q9D3H4 131 aa5.52□□□□□ -1.53
Vim-201ENSMUST00000028062 Gm11596B1AQB0 205 aa5.51□□□□□ -1.53
Vim-201ENSMUST00000028062 Syne2Q6ZWQ0 6874 aaKnown RBP5.5□□□□□ -1.53
Vim-201ENSMUST00000028062 A030014E15RikA0A1Y7VJV2 120 aa5.48□□□□□ -1.53
Vim-201ENSMUST00000028062 Krtap4-1Q3UUY3 169 aa5.47□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms