RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Birc6O88738 4882 aa10.53□□□□□ -0.72
Ctdsp1-201ENSMUST00000027367 Rnase13Q5GAM7 153 aa10.51□□□□□ -0.73
Ctdsp1-201ENSMUST00000027367 HydinQ80W93 5154 aa10.48□□□□□ -0.73
Ctdsp1-201ENSMUST00000027367 Cox6b2Q80ZN9 88 aa10.45□□□□□ -0.74
Ctdsp1-201ENSMUST00000027367 Ndufaf8A2AMZ4 74 aa10.38□□□□□ -0.75
Ctdsp1-201ENSMUST00000027367 Gm9955Q8CEJ8 102 aa10.37□□□□□ -0.75
Ctdsp1-201ENSMUST00000027367 Lrp2A2ARV4 4660 aa10.3□□□□□ -0.76
Ctdsp1-201ENSMUST00000027367 Gm10382Q3V0T5 144 aa10.28□□□□□ -0.76
Ctdsp1-201ENSMUST00000027367 Gm17416Q30KP4 66 aa10.26□□□□□ -0.77
Ctdsp1-201ENSMUST00000027367 Gm17606F6ZL36 78 aa10.14□□□□□ -0.79
Ctdsp1-201ENSMUST00000027367 PcloQ9QYX7 5068 aa10.12□□□□□ -0.79
Ctdsp1-201ENSMUST00000027367 Krtap3-1A2A591 98 aa10.04□□□□□ -0.8
Ctdsp1-201ENSMUST00000027367 2210017I01RikA0A0A6YVV1 95 aa10.02□□□□□ -0.81
Ctdsp1-201ENSMUST00000027367 Gm21887J3QQ04 176 aa9.99□□□□□ -0.81
Ctdsp1-201ENSMUST00000027367 2310057N15RikQ9D6T8 200 aa9.98□□□□□ -0.81
Ctdsp1-201ENSMUST00000027367 Sec61bQ9CQS8 96 aaKnown RBP9.91□□□□□ -0.82
Ctdsp1-201ENSMUST00000027367 Krtap13-1Q8K198 168 aa9.85□□□□□ -0.83
Ctdsp1-201ENSMUST00000027367 Krtap7-1Q9D3I6 87 aa9.79□□□□□ -0.84
Ctdsp1-201ENSMUST00000027367 Herc1E9PZP8 4859 aa9.78□□□□□ -0.84
Ctdsp1-201ENSMUST00000027367 Gm9112A2AI92 75 aa9.71□□□□□ -0.86
Ctdsp1-201ENSMUST00000027367 Gm19426M0QWC7 77 aa9.7□□□□□ -0.86
Ctdsp1-201ENSMUST00000027367 B930094E09RikQ8C4T2 136 aa9.66□□□□□ -0.86
Ctdsp1-201ENSMUST00000027367 Krtap1-5A2A590 122 aa9.63□□□□□ -0.87
Ctdsp1-201ENSMUST00000027367 BC029722A0A0N4SW31 51 aa9.62□□□□□ -0.87
Ctdsp1-201ENSMUST00000027367 Crct1Q6PAI5 102 aa9.62□□□□□ -0.87
Ctdsp1-201ENSMUST00000027367 Krtap16-3Q8C1I6 86 aa9.61□□□□□ -0.87
Ctdsp1-201ENSMUST00000027367 Lce1mQ9CR91 182 aa9.61□□□□□ -0.87
Ctdsp1-201ENSMUST00000027367 Gm10318A0A1W2P728 225 aa9.58□□□□□ -0.88
Ctdsp1-201ENSMUST00000027367 Fam229aB2KGE5 128 aa9.54□□□□□ -0.88
Ctdsp1-201ENSMUST00000027367 Gm40193A0A1B0GT39 78 aa9.52□□□□□ -0.89
Ctdsp1-201ENSMUST00000027367 Gm19668J3QMD1 248 aa9.5□□□□□ -0.89
Ctdsp1-201ENSMUST00000027367 Krtap19-1Q925H2 87 aa9.5□□□□□ -0.89
Ctdsp1-201ENSMUST00000027367 Krtap19-3Q925H6 87 aa9.45□□□□□ -0.9
Ctdsp1-201ENSMUST00000027367 Ush2AQ2QI47 5193 aa9.4□□□□□ -0.9
Ctdsp1-201ENSMUST00000027367 Hmcn2A2AJ76 5100 aa9.35□□□□□ -0.91
Ctdsp1-201ENSMUST00000027367 Ubr4A2AN08 5180 aa9.28□□□□□ -0.92
Ctdsp1-201ENSMUST00000027367 ZanO88799 5376 aa9.28□□□□□ -0.92
Ctdsp1-201ENSMUST00000027367 Gm17402F6Z0L5 76 aa9.24□□□□□ -0.93
Ctdsp1-201ENSMUST00000027367 Gm19402J3QJV4 266 aa9.22□□□□□ -0.93
Ctdsp1-201ENSMUST00000027367 4932415D10RikA0A1W2P6U8 4986 aa9.21□□□□□ -0.93
Ctdsp1-201ENSMUST00000027367 Krtap1-3A2A588 173 aa9.19□□□□□ -0.94
Ctdsp1-201ENSMUST00000027367 Spink7Q6IE32 76 aa9.18□□□□□ -0.94
Ctdsp1-201ENSMUST00000027367 Gm18596A0A1W2P860 280 aa9.17□□□□□ -0.94
Ctdsp1-201ENSMUST00000027367 Sprr2a3Q4KL71 83 aa9.1□□□□□ -0.95
Ctdsp1-201ENSMUST00000027367 Sprr2a1Q9CQK8 83 aa9.1□□□□□ -0.95
Ctdsp1-201ENSMUST00000027367 Gm9789Q8BIG3 52 aa9.09□□□□□ -0.95
Ctdsp1-201ENSMUST00000027367 Krtap1-4Q3V2D6 188 aa9.08□□□□□ -0.96
Ctdsp1-201ENSMUST00000027367 LorP18165 486 aa9□□□□□ -0.97
Ctdsp1-201ENSMUST00000027367 Fat4Q2PZL6 4981 aa9□□□□□ -0.97
Ctdsp1-201ENSMUST00000027367 Prm1P02319 51 aa8.98□□□□□ -0.97
Ctdsp1-201ENSMUST00000027367 Gm7735D3YX18 52 aa8.93□□□□□ -0.98
Ctdsp1-201ENSMUST00000027367 Rnf213E9Q555 5152 aaKnown RBP8.86□□□□□ -0.99
Ctdsp1-201ENSMUST00000027367 Lce1jD3YUU5 139 aa8.82□□□□□ -1
Ctdsp1-201ENSMUST00000027367 Krtap12-1Q9Z287 130 aa8.73□□□□□ -1.01
Ctdsp1-201ENSMUST00000027367 Krtap19-9aF8WH65 55 aa8.65□□□□□ -1.02
Ctdsp1-201ENSMUST00000027367 Camk2n1Q6QWF9 78 aa8.61□□□□□ -1.03
Ctdsp1-201ENSMUST00000027367 SspoQ8CG65 4998 aa8.52□□□□□ -1.04
Ctdsp1-201ENSMUST00000027367 Krtap17-1A2A5X6 109 aa8.51□□□□□ -1.05
Ctdsp1-201ENSMUST00000027367 Krtap19-2Q925I0 141 aa8.38□□□□□ -1.07
Ctdsp1-201ENSMUST00000027367 Krtap9-5A2A5X3 358 aa8.33□□□□□ -1.08
Ctdsp1-201ENSMUST00000027367 Tnp1P10856 55 aa8.32□□□□□ -1.08
Ctdsp1-201ENSMUST00000027367 Lce1iQ9D6P5 149 aa8.27□□□□□ -1.09
Ctdsp1-201ENSMUST00000027367 Lce1a2Q9D1K4 149 aa8.19□□□□□ -1.1
Ctdsp1-201ENSMUST00000027367 Gm10061D3Z714 54 aa8.19□□□□□ -1.1
Ctdsp1-201ENSMUST00000027367 Krtap8-1O08633 61 aa8.08□□□□□ -1.12
Ctdsp1-201ENSMUST00000027367 Muc5bE9Q5I3 4800 aa7.99□□□□□ -1.13
Ctdsp1-201ENSMUST00000027367 Krtap19-9bQ99NG9 58 aa7.98□□□□□ -1.13
Ctdsp1-201ENSMUST00000027367 2310046K23RikA0A0A6YVW6 87 aa7.92□□□□□ -1.14
Ctdsp1-201ENSMUST00000027367 Gm6358A0A087WPH4 74 aa7.89□□□□□ -1.15
Ctdsp1-201ENSMUST00000027367 Mt2P02798 61 aa7.79□□□□□ -1.16
Ctdsp1-201ENSMUST00000027367 Gm11569B1AQB1 180 aa7.7□□□□□ -1.18
Ctdsp1-201ENSMUST00000027367 Krtap9-3Q3V2C1 136 aa7.7□□□□□ -1.18
Ctdsp1-201ENSMUST00000027367 Lce1hQ9D6R3 140 aa7.61□□□□□ -1.19
Ctdsp1-201ENSMUST00000027367 Mdn1A2ANY6 5589 aaKnown RBP7.43□□□□□ -1.22
Ctdsp1-201ENSMUST00000027367 Krtap22-2J3QNX6 67 aa7.33□□□□□ -1.24
Ctdsp1-201ENSMUST00000027367 Lce1dQ9D731 133 aa7.27□□□□□ -1.25
Ctdsp1-201ENSMUST00000027367 4933428G20RikQ9D3X4 101 aa7.14□□□□□ -1.27
Ctdsp1-201ENSMUST00000027367 Krtap4-6Q3V4B7 195 aa7.03□□□□□ -1.28
Ctdsp1-201ENSMUST00000027367 Sprr2gO70558 76 aa7.02□□□□□ -1.28
Ctdsp1-201ENSMUST00000027367 Gm10272F7CZ33 110 aa7□□□□□ -1.29
Ctdsp1-201ENSMUST00000027367 Lce1eQ9D139 143 aa6.96□□□□□ -1.29
Ctdsp1-201ENSMUST00000027367 Gm11938Q9D3H4 131 aa6.96□□□□□ -1.29
Ctdsp1-201ENSMUST00000027367 Gm11555B1AQ89 175 aa6.96□□□□□ -1.3
Ctdsp1-201ENSMUST00000027367 Lce1gQ9D195 139 aa6.9□□□□□ -1.3
Ctdsp1-201ENSMUST00000027367 Krtap4-1Q3UUY3 169 aa6.88□□□□□ -1.31
Ctdsp1-201ENSMUST00000027367 Krtap4-2B1AQ85 167 aa6.85□□□□□ -1.31
Ctdsp1-201ENSMUST00000027367 Sprr2dO70555 85 aa6.79□□□□□ -1.32
Ctdsp1-201ENSMUST00000027367 Gm11596B1AQB0 205 aa6.75□□□□□ -1.33
Ctdsp1-201ENSMUST00000027367 Krtap31-1Q9D644 177 aa6.71□□□□□ -1.34
Ctdsp1-201ENSMUST00000027367 Gm11562A0PK51 136 aa6.68□□□□□ -1.34
Ctdsp1-201ENSMUST00000027367 Gm11564A2A4L9 201 aa6.65□□□□□ -1.35
Ctdsp1-201ENSMUST00000027367 Gm11563B1AQ90 168 aa6.65□□□□□ -1.35
Ctdsp1-201ENSMUST00000027367 Gm11595B1AQA7 289 aa6.65□□□□□ -1.35
Ctdsp1-201ENSMUST00000027367 Krtap4-8B1AQA8 209 aa6.65□□□□□ -1.35
Ctdsp1-201ENSMUST00000027367 Syne2Q6ZWQ0 6874 aaKnown RBP6.62□□□□□ -1.35
Ctdsp1-201ENSMUST00000027367 Mt4P47945 62 aa6.58□□□□□ -1.36
Ctdsp1-201ENSMUST00000027367 Sprr2iO70560 76 aa6.57□□□□□ -1.36
Ctdsp1-201ENSMUST00000027367 Syne1Q6ZWR6 8799 aa6.55□□□□□ -1.36
Ctdsp1-201ENSMUST00000027367 Krtap4-9B1AQA9 244 aa6.51□□□□□ -1.37
Ctdsp1-201ENSMUST00000027367 Gm38119A0A0A6YX29 146 aa6.5□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms