RNA–Protein interactions for RNA: ENSMUST00000023759.4

Smarcd1-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarcd1, Length 3,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1-201ENSMUST00000023759 Rpl37Q9D823 97 aa7.98□□□□□ -1.13
Smarcd1-201ENSMUST00000023759 Ryr1E9PZQ0 5035 aa7.97□□□□□ -1.13
Smarcd1-201ENSMUST00000023759 HydinQ80W93 5154 aa7.91□□□□□ -1.14
Smarcd1-201ENSMUST00000023759 Dnah8Q91XQ0 4731 aa7.91□□□□□ -1.14
Smarcd1-201ENSMUST00000023759 Ryr2E9Q401 4966 aaKnown RBP7.9□□□□□ -1.14
Smarcd1-201ENSMUST00000023759 2310057N15RikQ9D6T8 200 aa7.81□□□□□ -1.16
Smarcd1-201ENSMUST00000023759 Kiaa1109A2AAE1 5005 aa7.81□□□□□ -1.16
Smarcd1-201ENSMUST00000023759 Lrp2A2ARV4 4660 aa7.8□□□□□ -1.16
Smarcd1-201ENSMUST00000023759 Krtap3-1A2A591 98 aa7.78□□□□□ -1.16
Smarcd1-201ENSMUST00000023759 Gm10318A0A1W2P728 225 aa7.73□□□□□ -1.17
Smarcd1-201ENSMUST00000023759 Herc2Q4U2R1 4836 aa7.7□□□□□ -1.18
Smarcd1-201ENSMUST00000023759 PcloQ9QYX7 5068 aa7.64□□□□□ -1.19
Smarcd1-201ENSMUST00000023759 Gm19426M0QWC7 77 aa7.63□□□□□ -1.19
Smarcd1-201ENSMUST00000023759 Gm19668J3QMD1 248 aa7.61□□□□□ -1.19
Smarcd1-201ENSMUST00000023759 Dnhd1D3Z2X2 4750 aa7.59□□□□□ -1.19
Smarcd1-201ENSMUST00000023759 Gm17416Q30KP4 66 aa7.58□□□□□ -1.2
Smarcd1-201ENSMUST00000023759 Crct1Q6PAI5 102 aa7.56□□□□□ -1.2
Smarcd1-201ENSMUST00000023759 Gm9112A2AI92 75 aa7.55□□□□□ -1.2
Smarcd1-201ENSMUST00000023759 2210017I01RikA0A0A6YVV1 95 aa7.54□□□□□ -1.2
Smarcd1-201ENSMUST00000023759 Krtap13-1Q8K198 168 aa7.53□□□□□ -1.2
Smarcd1-201ENSMUST00000023759 B930094E09RikQ8C4T2 136 aa7.51□□□□□ -1.21
Smarcd1-201ENSMUST00000023759 BC029722A0A0N4SW31 51 aa7.48□□□□□ -1.21
Smarcd1-201ENSMUST00000023759 Gm19402J3QJV4 266 aa7.48□□□□□ -1.21
Smarcd1-201ENSMUST00000023759 Krtap7-1Q9D3I6 87 aa7.47□□□□□ -1.21
Smarcd1-201ENSMUST00000023759 Fam229aB2KGE5 128 aa7.37□□□□□ -1.23
Smarcd1-201ENSMUST00000023759 Spink7Q6IE32 76 aa7.36□□□□□ -1.23
Smarcd1-201ENSMUST00000023759 Ubr4A2AN08 5180 aa7.29□□□□□ -1.24
Smarcd1-201ENSMUST00000023759 Birc6O88738 4882 aa7.25□□□□□ -1.25
Smarcd1-201ENSMUST00000023759 Herc1E9PZP8 4859 aa7.21□□□□□ -1.26
Smarcd1-201ENSMUST00000023759 Sec61bQ9CQS8 96 aaKnown RBP7.16□□□□□ -1.26
Smarcd1-201ENSMUST00000023759 Fat4Q2PZL6 4981 aa7.16□□□□□ -1.26
Smarcd1-201ENSMUST00000023759 Krtap1-5A2A590 122 aa7.1□□□□□ -1.27
Smarcd1-201ENSMUST00000023759 Krtap16-3Q8C1I6 86 aa7.09□□□□□ -1.27
Smarcd1-201ENSMUST00000023759 ZanO88799 5376 aa7.08□□□□□ -1.28
Smarcd1-201ENSMUST00000023759 Gm40193A0A1B0GT39 78 aa7.02□□□□□ -1.29
Smarcd1-201ENSMUST00000023759 Sprr2a3Q4KL71 83 aa6.98□□□□□ -1.29
Smarcd1-201ENSMUST00000023759 Sprr2a1Q9CQK8 83 aa6.98□□□□□ -1.29
Smarcd1-201ENSMUST00000023759 Gm17402F6Z0L5 76 aa6.95□□□□□ -1.3
Smarcd1-201ENSMUST00000023759 Camk2n1Q6QWF9 78 aa6.95□□□□□ -1.3
Smarcd1-201ENSMUST00000023759 Krtap19-1Q925H2 87 aa6.9□□□□□ -1.3
Smarcd1-201ENSMUST00000023759 Krtap19-3Q925H6 87 aa6.9□□□□□ -1.3
Smarcd1-201ENSMUST00000023759 4932415D10RikA0A1W2P6U8 4986 aa6.9□□□□□ -1.31
Smarcd1-201ENSMUST00000023759 Rnf213E9Q555 5152 aaKnown RBP6.81□□□□□ -1.32
Smarcd1-201ENSMUST00000023759 Hmcn2A2AJ76 5100 aa6.78□□□□□ -1.32
Smarcd1-201ENSMUST00000023759 Ush2AQ2QI47 5193 aa6.78□□□□□ -1.32
Smarcd1-201ENSMUST00000023759 Krtap1-4Q3V2D6 188 aa6.77□□□□□ -1.33
Smarcd1-201ENSMUST00000023759 Lce1jD3YUU5 139 aa6.73□□□□□ -1.33
Smarcd1-201ENSMUST00000023759 LorP18165 486 aa6.67□□□□□ -1.34
Smarcd1-201ENSMUST00000023759 Krtap17-1A2A5X6 109 aa6.65□□□□□ -1.34
Smarcd1-201ENSMUST00000023759 Krtap1-3A2A588 173 aa6.54□□□□□ -1.36
Smarcd1-201ENSMUST00000023759 Krtap12-1Q9Z287 130 aa6.47□□□□□ -1.37
Smarcd1-201ENSMUST00000023759 Tnp1P10856 55 aa6.46□□□□□ -1.38
Smarcd1-201ENSMUST00000023759 Krtap19-9aF8WH65 55 aa6.4□□□□□ -1.39
Smarcd1-201ENSMUST00000023759 Lce1mQ9CR91 182 aa6.4□□□□□ -1.39
Smarcd1-201ENSMUST00000023759 Gm18596A0A1W2P860 280 aa6.27□□□□□ -1.41
Smarcd1-201ENSMUST00000023759 Lce1iQ9D6P5 149 aa6.24□□□□□ -1.41
Smarcd1-201ENSMUST00000023759 Krtap9-3Q3V2C1 136 aa6.23□□□□□ -1.41
Smarcd1-201ENSMUST00000023759 Lce1a2Q9D1K4 149 aa6.23□□□□□ -1.41
Smarcd1-201ENSMUST00000023759 Krtap9-5A2A5X3 358 aa6.15□□□□□ -1.42
Smarcd1-201ENSMUST00000023759 Gm9789Q8BIG3 52 aa6.1□□□□□ -1.43
Smarcd1-201ENSMUST00000023759 Krtap19-2Q925I0 141 aa6.09□□□□□ -1.43
Smarcd1-201ENSMUST00000023759 SspoQ8CG65 4998 aa6.09□□□□□ -1.43
Smarcd1-201ENSMUST00000023759 Krtap8-1O08633 61 aa6.07□□□□□ -1.44
Smarcd1-201ENSMUST00000023759 Lce1hQ9D6R3 140 aa6.06□□□□□ -1.44
Smarcd1-201ENSMUST00000023759 Krtap19-9bQ99NG9 58 aa6.04□□□□□ -1.44
Smarcd1-201ENSMUST00000023759 Mdn1A2ANY6 5589 aaKnown RBP5.95□□□□□ -1.46
Smarcd1-201ENSMUST00000023759 Gm7735D3YX18 52 aa5.94□□□□□ -1.46
Smarcd1-201ENSMUST00000023759 Prm1P02319 51 aa5.89□□□□□ -1.47
Smarcd1-201ENSMUST00000023759 2310046K23RikA0A0A6YVW6 87 aa5.88□□□□□ -1.47
Smarcd1-201ENSMUST00000023759 Lce1dQ9D731 133 aa5.79□□□□□ -1.48
Smarcd1-201ENSMUST00000023759 Mt2P02798 61 aa5.78□□□□□ -1.48
Smarcd1-201ENSMUST00000023759 Gm6358A0A087WPH4 74 aa5.71□□□□□ -1.5
Smarcd1-201ENSMUST00000023759 Muc5bE9Q5I3 4800 aa5.64□□□□□ -1.51
Smarcd1-201ENSMUST00000023759 Gm10061D3Z714 54 aa5.63□□□□□ -1.51
Smarcd1-201ENSMUST00000023759 Lce1eQ9D139 143 aa5.55□□□□□ -1.52
Smarcd1-201ENSMUST00000023759 Gm10272F7CZ33 110 aa5.54□□□□□ -1.52
Smarcd1-201ENSMUST00000023759 4933428G20RikQ9D3X4 101 aa5.43□□□□□ -1.54
Smarcd1-201ENSMUST00000023759 Lce1cQ9D1C5 147 aa5.37□□□□□ -1.55
Smarcd1-201ENSMUST00000023759 Krtap22-2J3QNX6 67 aa5.35□□□□□ -1.55
Smarcd1-201ENSMUST00000023759 Gm11938Q9D3H4 131 aa5.34□□□□□ -1.55
Smarcd1-201ENSMUST00000023759 Sprr2gO70558 76 aa5.31□□□□□ -1.56
Smarcd1-201ENSMUST00000023759 Syne1Q6ZWR6 8799 aa5.3□□□□□ -1.56
Smarcd1-201ENSMUST00000023759 Gm11569B1AQB1 180 aa5.28□□□□□ -1.56
Smarcd1-201ENSMUST00000023759 Krtap31-1Q9D644 177 aa5.26□□□□□ -1.57
Smarcd1-201ENSMUST00000023759 Fsip2A2ARZ3 6995 aa5.19□□□□□ -1.58
Smarcd1-201ENSMUST00000023759 Gm11562A0PK51 136 aa5.17□□□□□ -1.58
Smarcd1-201ENSMUST00000023759 Krtap31-2Q8CAY5 177 aa5.16□□□□□ -1.58
Smarcd1-201ENSMUST00000023759 Lce1fB9EJP6 147 aa5.16□□□□□ -1.58
Smarcd1-201ENSMUST00000023759 Lce1a1Q9CQH5 143 aa5.16□□□□□ -1.58
Smarcd1-201ENSMUST00000023759 Gm10100J3QK64 120 aa5.13□□□□□ -1.59
Smarcd1-201ENSMUST00000023759 Sprr2dO70555 85 aa5.13□□□□□ -1.59
Smarcd1-201ENSMUST00000023759 Lce3bQ9CQM7 98 aa5.1□□□□□ -1.59
Smarcd1-201ENSMUST00000023759 Gm10142J3KMP7 120 aa4.97□□□□□ -1.61
Smarcd1-201ENSMUST00000023759 Syne2Q6ZWQ0 6874 aaKnown RBP4.96□□□□□ -1.62
Smarcd1-201ENSMUST00000023759 Krtap4-6Q3V4B7 195 aa4.94□□□□□ -1.62
Smarcd1-201ENSMUST00000023759 Muc16A0A140LJ72 8478 aa4.92□□□□□ -1.62
Smarcd1-201ENSMUST00000023759 Lce3cQ91V05 98 aa4.9□□□□□ -1.62
Smarcd1-201ENSMUST00000023759 Lce3dE9Q8V1 98 aa4.85□□□□□ -1.63
Smarcd1-201ENSMUST00000023759 Gm38119A0A0A6YX29 146 aa4.84□□□□□ -1.63
Smarcd1-201ENSMUST00000023759 ObscnA2AAJ9 8891 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 989.2 ms