RNA–Protein interactions for RNA: ENSMUST00000021956.8

Ddx41-201, Transcript of Probable ATP-dependent RNA helicase DDX41, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx41, Length 2,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41-201ENSMUST00000021956 Krtap3-1A2A591 98 aa9.12□□□□□ -0.95
Ddx41-201ENSMUST00000021956 Gm17416Q30KP4 66 aa9.11□□□□□ -0.95
Ddx41-201ENSMUST00000021956 Krtap15-1Q9QZU5 150 aa9.04□□□□□ -0.96
Ddx41-201ENSMUST00000021956 Dnhd1D3Z2X2 4750 aa9.01□□□□□ -0.97
Ddx41-201ENSMUST00000021956 HydinQ80W93 5154 aa8.99□□□□□ -0.97
Ddx41-201ENSMUST00000021956 Gm21887J3QQ04 176 aa8.99□□□□□ -0.97
Ddx41-201ENSMUST00000021956 Gm19426M0QWC7 77 aa8.94□□□□□ -0.98
Ddx41-201ENSMUST00000021956 2210017I01RikA0A0A6YVV1 95 aa8.93□□□□□ -0.98
Ddx41-201ENSMUST00000021956 Gm5965D3Z724 196 aa8.93□□□□□ -0.98
Ddx41-201ENSMUST00000021956 Mycbp2Q7TPH6 4711 aa8.92□□□□□ -0.98
Ddx41-201ENSMUST00000021956 PcloQ9QYX7 5068 aa8.92□□□□□ -0.98
Ddx41-201ENSMUST00000021956 B930094E09RikQ8C4T2 136 aa8.9□□□□□ -0.98
Ddx41-201ENSMUST00000021956 Gm9736A0A1W2P7N1 277 aa8.88□□□□□ -0.99
Ddx41-201ENSMUST00000021956 Ndufaf8A2AMZ4 74 aa8.77□□□□□ -1.01
Ddx41-201ENSMUST00000021956 Lrp2A2ARV4 4660 aa8.74□□□□□ -1.01
Ddx41-201ENSMUST00000021956 Lce1mQ9CR91 182 aa8.74□□□□□ -1.01
Ddx41-201ENSMUST00000021956 BC029722A0A0N4SW31 51 aa8.73□□□□□ -1.01
Ddx41-201ENSMUST00000021956 Krtap7-1Q9D3I6 87 aa8.73□□□□□ -1.01
Ddx41-201ENSMUST00000021956 Gm17402F6Z0L5 76 aa8.7□□□□□ -1.02
Ddx41-201ENSMUST00000021956 Herc1E9PZP8 4859 aa8.66□□□□□ -1.02
Ddx41-201ENSMUST00000021956 Gm40193A0A1B0GT39 78 aa8.65□□□□□ -1.03
Ddx41-201ENSMUST00000021956 Prm2P07978 107 aa8.58□□□□□ -1.04
Ddx41-201ENSMUST00000021956 Fam229aB2KGE5 128 aa8.56□□□□□ -1.04
Ddx41-201ENSMUST00000021956 Krtap13-1Q8K198 168 aa8.54□□□□□ -1.04
Ddx41-201ENSMUST00000021956 Gm18596A0A1W2P860 280 aa8.43□□□□□ -1.06
Ddx41-201ENSMUST00000021956 Gm19402J3QJV4 266 aa8.39□□□□□ -1.07
Ddx41-201ENSMUST00000021956 2310057N15RikQ9D6T8 200 aa8.39□□□□□ -1.07
Ddx41-201ENSMUST00000021956 Krtap1-5A2A590 122 aa8.37□□□□□ -1.07
Ddx41-201ENSMUST00000021956 Sprr2a3Q4KL71 83 aa8.34□□□□□ -1.07
Ddx41-201ENSMUST00000021956 Sprr2a1Q9CQK8 83 aa8.34□□□□□ -1.07
Ddx41-201ENSMUST00000021956 Gm19668J3QMD1 248 aa8.3□□□□□ -1.08
Ddx41-201ENSMUST00000021956 Ush2AQ2QI47 5193 aa8.24□□□□□ -1.09
Ddx41-201ENSMUST00000021956 Sec61bQ9CQS8 96 aaKnown RBP8.22□□□□□ -1.09
Ddx41-201ENSMUST00000021956 Spink7Q6IE32 76 aa8.15□□□□□ -1.1
Ddx41-201ENSMUST00000021956 Hmcn2A2AJ76 5100 aa8.13□□□□□ -1.11
Ddx41-201ENSMUST00000021956 Prm1P02319 51 aa8.08□□□□□ -1.12
Ddx41-201ENSMUST00000021956 Gm9789Q8BIG3 52 aa8.07□□□□□ -1.12
Ddx41-201ENSMUST00000021956 Ubr4A2AN08 5180 aa8.06□□□□□ -1.12
Ddx41-201ENSMUST00000021956 Gm7735D3YX18 52 aa8.06□□□□□ -1.12
Ddx41-201ENSMUST00000021956 Gm9112A2AI92 75 aa8.05□□□□□ -1.12
Ddx41-201ENSMUST00000021956 Camk2n1Q6QWF9 78 aa8.01□□□□□ -1.13
Ddx41-201ENSMUST00000021956 4932415D10RikA0A1W2P6U8 4986 aa7.92□□□□□ -1.14
Ddx41-201ENSMUST00000021956 Krtap16-3Q8C1I6 86 aa7.9□□□□□ -1.15
Ddx41-201ENSMUST00000021956 Crct1Q6PAI5 102 aa7.88□□□□□ -1.15
Ddx41-201ENSMUST00000021956 Krtap1-3A2A588 173 aa7.8□□□□□ -1.16
Ddx41-201ENSMUST00000021956 Krtap1-4Q3V2D6 188 aa7.76□□□□□ -1.17
Ddx41-201ENSMUST00000021956 Krtap19-1Q925H2 87 aa7.76□□□□□ -1.17
Ddx41-201ENSMUST00000021956 Gm10318A0A1W2P728 225 aa7.75□□□□□ -1.17
Ddx41-201ENSMUST00000021956 ZanO88799 5376 aa7.72□□□□□ -1.17
Ddx41-201ENSMUST00000021956 Tnp1P10856 55 aa7.71□□□□□ -1.17
Ddx41-201ENSMUST00000021956 Krtap19-3Q925H6 87 aa7.68□□□□□ -1.18
Ddx41-201ENSMUST00000021956 Fat4Q2PZL6 4981 aa7.62□□□□□ -1.19
Ddx41-201ENSMUST00000021956 LorP18165 486 aa7.6□□□□□ -1.19
Ddx41-201ENSMUST00000021956 Rnf213E9Q555 5152 aaKnown RBP7.49□□□□□ -1.21
Ddx41-201ENSMUST00000021956 Krtap19-9aF8WH65 55 aa7.36□□□□□ -1.23
Ddx41-201ENSMUST00000021956 Lce1jD3YUU5 139 aa7.35□□□□□ -1.23
Ddx41-201ENSMUST00000021956 2310046K23RikA0A0A6YVW6 87 aa7.34□□□□□ -1.23
Ddx41-201ENSMUST00000021956 Krtap12-1Q9Z287 130 aa7.32□□□□□ -1.24
Ddx41-201ENSMUST00000021956 Krtap8-1O08633 61 aa7.26□□□□□ -1.25
Ddx41-201ENSMUST00000021956 SspoQ8CG65 4998 aa7.21□□□□□ -1.25
Ddx41-201ENSMUST00000021956 Gm10061D3Z714 54 aa7.19□□□□□ -1.26
Ddx41-201ENSMUST00000021956 Krtap19-9bQ99NG9 58 aa7.11□□□□□ -1.27
Ddx41-201ENSMUST00000021956 Gm11569B1AQB1 180 aa6.95□□□□□ -1.3
Ddx41-201ENSMUST00000021956 Lce1iQ9D6P5 149 aa6.91□□□□□ -1.3
Ddx41-201ENSMUST00000021956 Krtap17-1A2A5X6 109 aa6.91□□□□□ -1.3
Ddx41-201ENSMUST00000021956 Lce1a2Q9D1K4 149 aa6.87□□□□□ -1.31
Ddx41-201ENSMUST00000021956 Krtap9-3Q3V2C1 136 aa6.85□□□□□ -1.31
Ddx41-201ENSMUST00000021956 Krtap19-2Q925I0 141 aa6.85□□□□□ -1.31
Ddx41-201ENSMUST00000021956 Krtap9-5A2A5X3 358 aa6.83□□□□□ -1.32
Ddx41-201ENSMUST00000021956 Lce1hQ9D6R3 140 aa6.79□□□□□ -1.32
Ddx41-201ENSMUST00000021956 Muc5bE9Q5I3 4800 aa6.69□□□□□ -1.34
Ddx41-201ENSMUST00000021956 Gm11562A0PK51 136 aa6.58□□□□□ -1.36
Ddx41-201ENSMUST00000021956 Krtap4-2B1AQ85 167 aa6.58□□□□□ -1.36
Ddx41-201ENSMUST00000021956 Lce1dQ9D731 133 aa6.58□□□□□ -1.36
Ddx41-201ENSMUST00000021956 4933428G20RikQ9D3X4 101 aa6.56□□□□□ -1.36
Ddx41-201ENSMUST00000021956 Lce1gQ9D195 139 aa6.54□□□□□ -1.36
Ddx41-201ENSMUST00000021956 Sprr2gO70558 76 aa6.53□□□□□ -1.36
Ddx41-201ENSMUST00000021956 Gm6358A0A087WPH4 74 aa6.52□□□□□ -1.37
Ddx41-201ENSMUST00000021956 Mdn1A2ANY6 5589 aaKnown RBP6.46□□□□□ -1.38
Ddx41-201ENSMUST00000021956 Gm11555B1AQ89 175 aa6.44□□□□□ -1.38
Ddx41-201ENSMUST00000021956 Syne2Q6ZWQ0 6874 aaKnown RBP6.4□□□□□ -1.38
Ddx41-201ENSMUST00000021956 Gm11938Q9D3H4 131 aa6.38□□□□□ -1.39
Ddx41-201ENSMUST00000021956 Sprr2dO70555 85 aa6.38□□□□□ -1.39
Ddx41-201ENSMUST00000021956 Mt2P02798 61 aa6.38□□□□□ -1.39
Ddx41-201ENSMUST00000021956 Krtap4-6Q3V4B7 195 aa6.38□□□□□ -1.39
Ddx41-201ENSMUST00000021956 Lce1eQ9D139 143 aa6.34□□□□□ -1.39
Ddx41-201ENSMUST00000021956 Gm11596B1AQB0 205 aa6.33□□□□□ -1.4
Ddx41-201ENSMUST00000021956 Krtap4-1Q3UUY3 169 aa6.26□□□□□ -1.41
Ddx41-201ENSMUST00000021956 Gm11564A2A4L9 201 aa6.09□□□□□ -1.44
Ddx41-201ENSMUST00000021956 Gm11563B1AQ90 168 aa6.09□□□□□ -1.44
Ddx41-201ENSMUST00000021956 Gm11595B1AQA7 289 aa6.09□□□□□ -1.44
Ddx41-201ENSMUST00000021956 Krtap4-8B1AQA8 209 aa6.09□□□□□ -1.44
Ddx41-201ENSMUST00000021956 Gm10272F7CZ33 110 aa6.08□□□□□ -1.44
Ddx41-201ENSMUST00000021956 Krtap22-2J3QNX6 67 aa5.98□□□□□ -1.45
Ddx41-201ENSMUST00000021956 Lce1cQ9D1C5 147 aa5.95□□□□□ -1.46
Ddx41-201ENSMUST00000021956 Krtap4-9B1AQA9 244 aa5.92□□□□□ -1.46
Ddx41-201ENSMUST00000021956 Fsip2A2ARZ3 6995 aa5.9□□□□□ -1.46
Ddx41-201ENSMUST00000021956 Krtap19-4Q925H7 84 aa5.89□□□□□ -1.47
Ddx41-201ENSMUST00000021956 Mt4P47945 62 aa5.89□□□□□ -1.47
Ddx41-201ENSMUST00000021956 Gm10100J3QK64 120 aa5.86□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms