RNA–Protein interactions for RNA: ENSMUST00000000109.10

Cntn1-201, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 5,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-201ENSMUST00000000109 Krtap4-1Q3UUY3 169 aa2.93□□□□□ -1.94
Cntn1-201ENSMUST00000000109 Dnah9B1AR51 4484 aa2.92□□□□□ -1.94
Cntn1-201ENSMUST00000000109 TnxbO35452 4006 aa2.91□□□□□ -1.94
Cntn1-201ENSMUST00000000109 Krtap3-1A2A591 98 aa2.91□□□□□ -1.94
Cntn1-201ENSMUST00000000109 Dync2h1Q45VK7 4306 aa2.89□□□□□ -1.95
Cntn1-201ENSMUST00000000109 Ryr3A2AGL3 4863 aa2.89□□□□□ -1.95
Cntn1-201ENSMUST00000000109 Dnah1E9Q8T7 4250 aa2.89□□□□□ -1.95
Cntn1-201ENSMUST00000000109 PlecQ9QXS1 4691 aaKnown RBP2.87□□□□□ -1.95
Cntn1-201ENSMUST00000000109 Dnah17Q69Z23 4481 aa2.86□□□□□ -1.95
Cntn1-201ENSMUST00000000109 Vps13dB1ART2 4390 aa2.84□□□□□ -1.95
Cntn1-201ENSMUST00000000109 Ryr1E9PZQ0 5035 aa2.83□□□□□ -1.96
Cntn1-201ENSMUST00000000109 Gm9736A0A1W2P7N1 277 aa2.82□□□□□ -1.96
Cntn1-201ENSMUST00000000109 Krtap7-1Q9D3I6 87 aa2.8□□□□□ -1.96
Cntn1-201ENSMUST00000000109 Gm17402F6Z0L5 76 aa2.8□□□□□ -1.96
Cntn1-201ENSMUST00000000109 Lrp1Q91ZX7 4545 aaKnown RBP2.79□□□□□ -1.96
Cntn1-201ENSMUST00000000109 Krtap31-1Q9D644 177 aa2.76□□□□□ -1.97
Cntn1-201ENSMUST00000000109 Vps13bQ80TY5 3993 aa2.75□□□□□ -1.97
Cntn1-201ENSMUST00000000109 Lrp1bQ9JI18 4599 aa2.75□□□□□ -1.97
Cntn1-201ENSMUST00000000109 Fat3Q8BNA6 4555 aa2.74□□□□□ -1.97
Cntn1-201ENSMUST00000000109 Gm18596A0A1W2P860 280 aa2.73□□□□□ -1.97
Cntn1-201ENSMUST00000000109 Gm19402J3QJV4 266 aa2.73□□□□□ -1.97
Cntn1-201ENSMUST00000000109 Hectd4E9Q2E4 4418 aa2.73□□□□□ -1.97
Cntn1-201ENSMUST00000000109 ApobE9Q414 4505 aa2.73□□□□□ -1.97
Cntn1-201ENSMUST00000000109 Krtap13-1Q8K198 168 aa2.72□□□□□ -1.97
Cntn1-201ENSMUST00000000109 Pkd1O08852 4293 aa2.72□□□□□ -1.97
Cntn1-201ENSMUST00000000109 Gm11563B1AQ90 168 aa2.72□□□□□ -1.97
Cntn1-201ENSMUST00000000109 Krtap4-7Q9D732 168 aa2.72□□□□□ -1.97
Cntn1-201ENSMUST00000000109 Gm10318A0A1W2P728 225 aa2.71□□□□□ -1.98
Cntn1-201ENSMUST00000000109 Gm19668J3QMD1 248 aa2.7□□□□□ -1.98
Cntn1-201ENSMUST00000000109 Fat1A0A1L1SQU7 4645 aa2.7□□□□□ -1.98
Cntn1-201ENSMUST00000000109 Mycbp2Q7TPH6 4711 aa2.69□□□□□ -1.98
Cntn1-201ENSMUST00000000109 Krtap31-2Q8CAY5 177 aa2.69□□□□□ -1.98
Cntn1-201ENSMUST00000000109 Abca13Q5SSE9 5034 aa2.69□□□□□ -1.98
Cntn1-201ENSMUST00000000109 HydinQ80W93 5154 aa2.68□□□□□ -1.98
Cntn1-201ENSMUST00000000109 Dnah2P0C6F1 4456 aa2.67□□□□□ -1.98
Cntn1-201ENSMUST00000000109 Fat2Q5F226 4351 aa2.66□□□□□ -1.98
Cntn1-201ENSMUST00000000109 PcloQ9QYX7 5068 aa2.66□□□□□ -1.98
Cntn1-201ENSMUST00000000109 Dync1h1Q9JHU4 4644 aaKnown RBP2.65□□□□□ -1.98
Cntn1-201ENSMUST00000000109 Pkhd1l1Q80ZA4 4249 aa2.65□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Gm6358A0A087WPH4 74 aa2.64□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Pkhd1E9PZ36 4059 aa2.63□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Kmt2cQ8BRH4 4903 aa2.63□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Gm11555B1AQ89 175 aa2.62□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Krtap19-5O08632 62 aa2.62□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Crct1Q6PAI5 102 aa2.62□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Lrp2A2ARV4 4660 aa2.62□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Sprr2kO70562 68 aa2.62□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Kiaa1109A2AAE1 5005 aa2.61□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Herc2Q4U2R1 4836 aa2.61□□□□□ -1.99
Cntn1-201ENSMUST00000000109 SacsQ9JLC8 4582 aa2.6□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Ryr2E9Q401 4966 aaKnown RBP2.59□□□□□ -1.99
Cntn1-201ENSMUST00000000109 Krtap4-2B1AQ85 167 aa2.57□□□□□ -2
Cntn1-201ENSMUST00000000109 Sprr2a3Q4KL71 83 aa2.56□□□□□ -2
Cntn1-201ENSMUST00000000109 Sprr2a1Q9CQK8 83 aa2.56□□□□□ -2
Cntn1-201ENSMUST00000000109 Dnhd1D3Z2X2 4750 aa2.52□□□□□ -2.01
Cntn1-201ENSMUST00000000109 Herc1E9PZP8 4859 aa2.52□□□□□ -2.01
Cntn1-201ENSMUST00000000109 Sprr2gO70558 76 aa2.5□□□□□ -2.01
Cntn1-201ENSMUST00000000109 Birc6O88738 4882 aa2.48□□□□□ -2.01
Cntn1-201ENSMUST00000000109 Krtap1-3A2A588 173 aa2.48□□□□□ -2.01
Cntn1-201ENSMUST00000000109 Krtap1-5A2A590 122 aa2.48□□□□□ -2.01
Cntn1-201ENSMUST00000000109 Dnah8Q91XQ0 4731 aa2.46□□□□□ -2.02
Cntn1-201ENSMUST00000000109 Ubr4A2AN08 5180 aa2.46□□□□□ -2.02
Cntn1-201ENSMUST00000000109 Lce1mQ9CR91 182 aa2.38□□□□□ -2.03
Cntn1-201ENSMUST00000000109 Krtap17-1A2A5X6 109 aa2.37□□□□□ -2.03
Cntn1-201ENSMUST00000000109 Krtap1-4Q3V2D6 188 aa2.36□□□□□ -2.03
Cntn1-201ENSMUST00000000109 Fat4Q2PZL6 4981 aa2.36□□□□□ -2.03
Cntn1-201ENSMUST00000000109 LorP18165 486 aa2.34□□□□□ -2.03
Cntn1-201ENSMUST00000000109 ZanO88799 5376 aa2.34□□□□□ -2.03
Cntn1-201ENSMUST00000000109 Ush2AQ2QI47 5193 aa2.31□□□□□ -2.04
Cntn1-201ENSMUST00000000109 Krtap19-9aF8WH65 55 aa2.3□□□□□ -2.04
Cntn1-201ENSMUST00000000109 Krtap8-1O08633 61 aa2.3□□□□□ -2.04
Cntn1-201ENSMUST00000000109 Krtap19-9bQ99NG9 58 aa2.29□□□□□ -2.04
Cntn1-201ENSMUST00000000109 Krtap12-1Q9Z287 130 aa2.28□□□□□ -2.04
Cntn1-201ENSMUST00000000109 Hmcn2A2AJ76 5100 aa2.28□□□□□ -2.04
Cntn1-201ENSMUST00000000109 2310046K23RikA0A0A6YVW6 87 aa2.27□□□□□ -2.05
Cntn1-201ENSMUST00000000109 Prm1P02319 51 aa2.27□□□□□ -2.05
Cntn1-201ENSMUST00000000109 Sprr2fO70557 76 aa2.27□□□□□ -2.05
Cntn1-201ENSMUST00000000109 Rnf213E9Q555 5152 aaKnown RBP2.26□□□□□ -2.05
Cntn1-201ENSMUST00000000109 Krtap16-3Q8C1I6 86 aa2.23□□□□□ -2.05
Cntn1-201ENSMUST00000000109 4932415D10RikA0A1W2P6U8 4986 aa2.22□□□□□ -2.05
Cntn1-201ENSMUST00000000109 Gm7735D3YX18 52 aa2.21□□□□□ -2.06
Cntn1-201ENSMUST00000000109 Gm10272F7CZ33 110 aa2.2□□□□□ -2.06
Cntn1-201ENSMUST00000000109 Krtap19-3Q925H6 87 aa2.19□□□□□ -2.06
Cntn1-201ENSMUST00000000109 Gm11562A0PK51 136 aa2.17□□□□□ -2.06
Cntn1-201ENSMUST00000000109 Krtap19-1Q925H2 87 aa2.16□□□□□ -2.06
Cntn1-201ENSMUST00000000109 Gm9789Q8BIG3 52 aa2.15□□□□□ -2.06
Cntn1-201ENSMUST00000000109 Mdn1A2ANY6 5589 aaKnown RBP2.15□□□□□ -2.07
Cntn1-201ENSMUST00000000109 Gm10100J3QK64 120 aa2.13□□□□□ -2.07
Cntn1-201ENSMUST00000000109 Lce1jD3YUU5 139 aa2.12□□□□□ -2.07
Cntn1-201ENSMUST00000000109 Lce3bQ9CQM7 98 aa2.12□□□□□ -2.07
Cntn1-201ENSMUST00000000109 Sprr2dO70555 85 aa2.1□□□□□ -2.07
Cntn1-201ENSMUST00000000109 Sprr2eO70556 76 aa2.1□□□□□ -2.07
Cntn1-201ENSMUST00000000109 Lce3cQ91V05 98 aa2.09□□□□□ -2.07
Cntn1-201ENSMUST00000000109 Gm10142J3KMP7 120 aa2.08□□□□□ -2.08
Cntn1-201ENSMUST00000000109 Lce3aQ497I5 98 aa2.08□□□□□ -2.08
Cntn1-201ENSMUST00000000109 Lce3eF8VQJ0 98 aa2.07□□□□□ -2.08
Cntn1-201ENSMUST00000000109 Lce3fQ6PAI4 98 aa2.07□□□□□ -2.08
Cntn1-201ENSMUST00000000109 Sprr2iO70560 76 aa2.06□□□□□ -2.08
Cntn1-201ENSMUST00000000109 Krtap9-5A2A5X3 358 aa2.05□□□□□ -2.08
Cntn1-201ENSMUST00000000109 Syne1Q6ZWR6 8799 aa2.04□□□□□ -2.08
Retrieved 100 of 22,080 RNA–protein pairs in 423 ms