RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C RSC4Q02206 625 aa8.45□□□□□ -1.06
SRP54YPR088C SLD7Q08457 257 aa8.45□□□□□ -1.06
SRP54YPR088C SLP1Q12232 587 aa8.45□□□□□ -1.06
SRP54YPR088C ACO1P19414 778 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
SRP54YPR088C AAT2P23542 418 aaKnown RBP8.44□□□□□ -1.06
SRP54YPR088C APM3P38153 483 aa8.44□□□□□ -1.06
SRP54YPR088C UBP7P40453 1071 aa8.44□□□□□ -1.06
SRP54YPR088C YJL107CP42947 387 aa8.44□□□□□ -1.06
SRP54YPR088C CCT8P47079 568 aaKnown RBP8.44□□□□□ -1.06
SRP54YPR088C TIM13P53299 105 aa8.44□□□□□ -1.06
SRP54YPR088C NOP15P53927 220 aaPredicted RBP8.44□□□□□ -1.06
SRP54YPR088C LEE1Q02799 301 aaKnown RBP8.44□□□□□ -1.06
SRP54YPR088C YMR206WQ03695 313 aa8.44□□□□□ -1.06
SRP54YPR088C NHX1Q04121 633 aa8.44□□□□□ -1.06
SRP54YPR088C CDC123Q05791 360 aa8.44□□□□□ -1.06
SRP54YPR088C YEL077CQ3E7X8 1277 aa8.44□□□□□ -1.06
SRP54YPR088C ATP12P22135 325 aa8.43□□□□□ -1.06
SRP54YPR088C MIH1P23748 554 aa8.43□□□□□ -1.06
SRP54YPR088C HRR25P29295 494 aaKnown RBP8.43□□□□□ -1.06
SRP54YPR088C RIM1P32445 135 aaKnown RBP8.43□□□□□ -1.06
SRP54YPR088C RDH54P38086 958 aa8.43□□□□□ -1.06
SRP54YPR088C CRP1P38845 465 aaKnown RBP8.43□□□□□ -1.06
SRP54YPR088C YML119WQ03208 357 aa8.43□□□□□ -1.06
SRP54YPR088C SEG1Q04279 960 aa8.43□□□□□ -1.06
SRP54YPR088C RSC2Q06488 889 aa8.43□□□□□ -1.06
SRP54YPR088C CMS1Q07897 291 aaKnown RBP8.43□□□□□ -1.06
SRP54YPR088C BUD20Q08004 166 aaPredicted RBP8.43□□□□□ -1.06
SRP54YPR088C NDD1Q08887 554 aa8.43□□□□□ -1.06
SRP54YPR088C KCS1Q12494 1050 aa8.43□□□□□ -1.06
SRP54YPR088C ENO1P00924 437 aaKnown RBP8.43□□□□□ -1.06
SRP54YPR088C HSF1P10961 833 aa8.43□□□□□ -1.06
SRP54YPR088C CLN1P20437 546 aa8.43□□□□□ -1.06
SRP54YPR088C BEM3P32873 1128 aa8.43□□□□□ -1.06
SRP54YPR088C CYM1P32898 989 aa8.43□□□□□ -1.06
SRP54YPR088C YBR062CP38239 180 aa8.43□□□□□ -1.06
SRP54YPR088C OAF1P39720 1047 aaPredicted RBP8.43□□□□□ -1.06
SRP54YPR088C PEP8P40335 379 aa8.43□□□□□ -1.06
SRP54YPR088C BUD13P46947 266 aaPredicted RBP8.43□□□□□ -1.06
SRP54YPR088C YGL140CP53120 1219 aa8.43□□□□□ -1.06
SRP54YPR088C TRS31Q03337 283 aa8.43□□□□□ -1.06
SRP54YPR088C PEX15Q08215 383 aa8.43□□□□□ -1.06
SRP54YPR088C MRPL8P22353 238 aa8.42□□□□□ -1.06
SRP54YPR088C DEP1P31385 405 aa8.42□□□□□ -1.06
SRP54YPR088C GDA1P32621 518 aa8.42□□□□□ -1.06
SRP54YPR088C MRP21P38175 177 aa8.42□□□□□ -1.06
SRP54YPR088C YHI9P38765 294 aa8.42□□□□□ -1.06
SRP54YPR088C YJL206CP39529 758 aa8.42□□□□□ -1.06
SRP54YPR088C SEO1P39709 593 aa8.42□□□□□ -1.06
SRP54YPR088C EXO1P39875 702 aa8.42□□□□□ -1.06
SRP54YPR088C PFK26P40433 827 aaKnown RBP8.42□□□□□ -1.06
SRP54YPR088C OYE3P41816 400 aaPredicted RBP8.42□□□□□ -1.06
SRP54YPR088C AMA1P50082 593 aa8.42□□□□□ -1.06
SRP54YPR088C TUB4P53378 473 aa8.42□□□□□ -1.06
SRP54YPR088C YTP1P53584 459 aa8.42□□□□□ -1.06
SRP54YPR088C EFM6P53970 246 aa8.42□□□□□ -1.06
SRP54YPR088C RPL34AP87262 121 aaPredicted RBP8.42□□□□□ -1.06
SRP54YPR088C NUP100Q02629 959 aa8.42□□□□□ -1.06
SRP54YPR088C YSH1Q06224 779 aaPredicted RBP8.42□□□□□ -1.06
SRP54YPR088C ERG20P08524 352 aaKnown RBP8.41□□□□□ -1.06
SRP54YPR088C SST2P11972 698 aaKnown RBP8.41□□□□□ -1.06
SRP54YPR088C HSP26P15992 214 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
SRP54YPR088C AAD3P25612 363 aa8.41□□□□□ -1.06
SRP54YPR088C YSW1P38280 609 aa8.41□□□□□ -1.06
SRP54YPR088C PAN2P53010 1115 aaPredicted RBP8.41□□□□□ -1.06
SRP54YPR088C TAF6P53040 516 aa8.41□□□□□ -1.06
SRP54YPR088C BUD32P53323 261 aa8.41□□□□□ -1.06
SRP54YPR088C UBX4P54730 416 aa8.41□□□□□ -1.06
SRP54YPR088C REG1Q00816 1014 aa8.41□□□□□ -1.06
SRP54YPR088C TAF11Q04226 346 aa8.41□□□□□ -1.06
SRP54YPR088C SPE4Q12455 300 aa8.41□□□□□ -1.06
SRP54YPR088C PEX11Q12462 236 aa8.41□□□□□ -1.06
SRP54YPR088C RGS2Q99188 309 aa8.41□□□□□ -1.06
SRP54YPR088C GCY1P14065 312 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
SRP54YPR088C ARF2P19146 181 aaKnown RBP8.4□□□□□ -1.06
SRP54YPR088C AMD2P22580 549 aa8.4□□□□□ -1.06
SRP54YPR088C YSP3P25036 478 aa8.4□□□□□ -1.06
SRP54YPR088C MSH2P25847 964 aa8.4□□□□□ -1.06
SRP54YPR088C RRP14P36080 434 aaKnown RBP8.4□□□□□ -1.06
SRP54YPR088C TFA2P36145 328 aa8.4□□□□□ -1.06
SRP54YPR088C POL12P38121 705 aaPredicted RBP8.4□□□□□ -1.06
SRP54YPR088C GGA2P38817 585 aaKnown RBP8.4□□□□□ -1.06
SRP54YPR088C HEM14P40012 539 aa8.4□□□□□ -1.06
SRP54YPR088C MRX1P40050 688 aa8.4□□□□□ -1.06
SRP54YPR088C SEC28P40509 296 aaKnown RBP8.4□□□□□ -1.06
SRP54YPR088C PEX8P53248 589 aa8.4□□□□□ -1.06
SRP54YPR088C RCF2P53721 224 aa8.4□□□□□ -1.06
SRP54YPR088C IPI3P53877 555 aa8.4□□□□□ -1.06
SRP54YPR088C YNL058CP53947 316 aa8.4□□□□□ -1.06
SRP54YPR088C FAP1P53971 965 aa8.4□□□□□ -1.06
SRP54YPR088C YMR209CQ03648 457 aa8.4□□□□□ -1.06
SRP54YPR088C SHE9Q04172 456 aa8.4□□□□□ -1.06
SRP54YPR088C YDR109CQ04585 715 aa8.4□□□□□ -1.06
SRP54YPR088C YDR344CQ05510 147 aa8.4□□□□□ -1.06
SRP54YPR088C TRE2Q08693 809 aa8.4□□□□□ -1.06
SRP54YPR088C YLR046CQ12253 270 aa8.4□□□□□ -1.06
SRP54YPR088C SCH9P11792 824 aaKnown RBP8.4□□□□□ -1.07
SRP54YPR088C REV1P12689 985 aa8.4□□□□□ -1.07
SRP54YPR088C DAL81P21657 970 aa8.4□□□□□ -1.07
SRP54YPR088C SEC14P24280 304 aaKnown RBP8.4□□□□□ -1.07
SRP54YPR088C MCM5P29496 775 aaKnown RBP8.4□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms