RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C STP3Q05937 343 aa4.33□□□□□ -1.72
CCL1YPR025C COX17Q12287 69 aa4.33□□□□□ -1.72
CCL1YPR025C ICT1Q12385 394 aa4.33□□□□□ -1.72
CCL1YPR025C SSM4P40318 1319 aa4.32□□□□□ -1.72
CCL1YPR025C COX1P00401 534 aa4.32□□□□□ -1.72
CCL1YPR025C MDM10P18409 493 aa4.32□□□□□ -1.72
CCL1YPR025C GSY2P27472 705 aa4.32□□□□□ -1.72
CCL1YPR025C VBA2P38358 474 aaKnown RBP4.32□□□□□ -1.72
CCL1YPR025C NPR3P38742 1146 aa4.32□□□□□ -1.72
CCL1YPR025C ERC1P38767 581 aa4.32□□□□□ -1.72
CCL1YPR025C FUN12P39730 1002 aaKnown RBP4.32□□□□□ -1.72
CCL1YPR025C CIR1P42940 261 aa4.32□□□□□ -1.72
CCL1YPR025C NPA3P47122 385 aa4.32□□□□□ -1.72
CCL1YPR025C YGR079WP53249 370 aa4.32□□□□□ -1.72
CCL1YPR025C YNL058CP53947 316 aa4.32□□□□□ -1.72
CCL1YPR025C YOR389WQ08912 624 aa4.32□□□□□ -1.72
CCL1YPR025C RDL1Q12305 139 aaKnown RBP4.32□□□□□ -1.72
CCL1YPR025C SES1P07284 462 aaKnown RBP4.31□□□□□ -1.72
CCL1YPR025C MTF2P10849 440 aa4.31□□□□□ -1.72
CCL1YPR025C UBC1P21734 215 aaKnown RBP4.31□□□□□ -1.72
CCL1YPR025C APN1P22936 367 aa4.31□□□□□ -1.72
CCL1YPR025C XRS2P33301 854 aa4.31□□□□□ -1.72
CCL1YPR025C NUP120P35729 1037 aa4.31□□□□□ -1.72
CCL1YPR025C EXO84P38261 753 aa4.31□□□□□ -1.72
CCL1YPR025C IFA38P38286 347 aa4.31□□□□□ -1.72
CCL1YPR025C BUD16P39988 312 aa4.31□□□□□ -1.72
CCL1YPR025C UBX6P47049 396 aa4.31□□□□□ -1.72
CCL1YPR025C YAT1P80235 687 aa4.31□□□□□ -1.72
CCL1YPR025C YDR109CQ04585 715 aa4.31□□□□□ -1.72
CCL1YPR025C YPL191CQ08930 360 aa4.31□□□□□ -1.72
CCL1YPR025C ATP2P00830 511 aaKnown RBP4.3□□□□□ -1.72
CCL1YPR025C TPK1P06244 397 aa4.3□□□□□ -1.72
CCL1YPR025C ILV2P07342 687 aaKnown RBP4.3□□□□□ -1.72
CCL1YPR025C KES1P35844 434 aaKnown RBP4.3□□□□□ -1.72
CCL1YPR025C PSY4P38193 441 aa4.3□□□□□ -1.72
CCL1YPR025C GTR1Q00582 310 aa4.3□□□□□ -1.72
CCL1YPR025C YPL071CQ02864 156 aa4.3□□□□□ -1.72
CCL1YPR025C GTB1Q04924 702 aa4.3□□□□□ -1.72
CCL1YPR025C ORM2Q06144 216 aa4.3□□□□□ -1.72
CCL1YPR025C BSP1Q06604 576 aa4.3□□□□□ -1.72
CCL1YPR025C PCD1Q12524 340 aa4.3□□□□□ -1.72
CCL1YPR025C PFK2P16862 959 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
CCL1YPR025C LAC1P28496 418 aa4.29□□□□□ -1.72
CCL1YPR025C RAD16P31244 790 aa4.29□□□□□ -1.72
CCL1YPR025C IMD2P38697 523 aaKnown RBP4.29□□□□□ -1.72
CCL1YPR025C UME6P39001 836 aa4.29□□□□□ -1.72
CCL1YPR025C IMD3P50095 523 aaKnown RBP4.29□□□□□ -1.72
CCL1YPR025C TPO3Q06451 622 aa4.29□□□□□ -1.72
CCL1YPR025C SPN1Q06505 410 aaPredicted RBP4.29□□□□□ -1.72
CCL1YPR025C RAD34Q06665 692 aa4.29□□□□□ -1.72
CCL1YPR025C IRC3Q06683 689 aa4.29□□□□□ -1.72
CCL1YPR025C CSR1Q06705 408 aaKnown RBP4.29□□□□□ -1.72
CCL1YPR025C VAM6Q07468 1049 aa4.29□□□□□ -1.72
CCL1YPR025C PRS5Q12265 496 aaKnown RBP4.29□□□□□ -1.72
CCL1YPR025C FRE7Q12333 620 aa4.29□□□□□ -1.72
CCL1YPR025C PGK1P00560 416 aaKnown RBP4.28□□□□□ -1.72
CCL1YPR025C MAK32P23060 363 aa4.28□□□□□ -1.72
CCL1YPR025C URE2P23202 354 aaKnown RBP4.28□□□□□ -1.72
CCL1YPR025C PTC6P25646 442 aa4.28□□□□□ -1.72
CCL1YPR025C RFA2P26754 273 aaKnown RBP4.28□□□□□ -1.72
CCL1YPR025C HES1P35843 434 aa4.28□□□□□ -1.72
CCL1YPR025C IML2P47031 731 aa4.28□□□□□ -1.72
CCL1YPR025C COG1P53079 417 aa4.28□□□□□ -1.72
CCL1YPR025C RIM13Q03792 727 aa4.28□□□□□ -1.72
CCL1YPR025C ECM16Q04217 1267 aaKnown RBP4.28□□□□□ -1.72
CCL1YPR025C SEG1Q04279 960 aa4.28□□□□□ -1.72
CCL1YPR025C ATG23Q06671 453 aa4.28□□□□□ -1.72
CCL1YPR025C SWT1Q12104 458 aa4.28□□□□□ -1.72
CCL1YPR025C YLR111WQ12528 110 aa4.28□□□□□ -1.72
CCL1YPR025C YML003WP0CF16 290 aa4.27□□□□□ -1.73
CCL1YPR025C MBR1P23493 339 aa4.27□□□□□ -1.73
CCL1YPR025C FTH1P38310 465 aa4.27□□□□□ -1.73
CCL1YPR025C YIL161WP40449 235 aaKnown RBP4.27□□□□□ -1.73
CCL1YPR025C NMD5P46970 1048 aa4.27□□□□□ -1.73
CCL1YPR025C BNA1P47096 177 aa4.27□□□□□ -1.73
CCL1YPR025C CTF18P49956 741 aa4.27□□□□□ -1.73
CCL1YPR025C TRM8Q12009 286 aa4.27□□□□□ -1.73
CCL1YPR025C SNF1P06782 633 aaKnown RBP4.26□□□□□ -1.73
CCL1YPR025C SPO16P17122 198 aa4.26□□□□□ -1.73
CCL1YPR025C DPB3P27344 201 aa4.26□□□□□ -1.73
CCL1YPR025C GSH1P32477 678 aa4.26□□□□□ -1.73
CCL1YPR025C SLC1P33333 303 aa4.26□□□□□ -1.73
CCL1YPR025C TEF4P36008 412 aaKnown RBP4.26□□□□□ -1.73
CCL1YPR025C XBP1P40489 647 aa4.26□□□□□ -1.73
CCL1YPR025C DJP1P40564 432 aa4.26□□□□□ -1.73
CCL1YPR025C CIN1P40987 1014 aa4.26□□□□□ -1.73
CCL1YPR025C BPL1P48445 690 aaPredicted RBP4.26□□□□□ -1.73
CCL1YPR025C MSY1P48527 492 aa4.26□□□□□ -1.73
CCL1YPR025C PSP1P50896 841 aaKnown RBP4.26□□□□□ -1.73
CCL1YPR025C RRT6P53117 311 aaPredicted RBP4.26□□□□□ -1.73
CCL1YPR025C YML131WQ03102 365 aa4.26□□□□□ -1.73
CCL1YPR025C SNU56Q03782 492 aaKnown RBP4.26□□□□□ -1.73
CCL1YPR025C TMA16Q08687 178 aa4.26□□□□□ -1.73
CCL1YPR025C LEA1Q08963 238 aaPredicted RBP4.26□□□□□ -1.73
CCL1YPR025C LYS21Q12122 440 aaKnown RBP4.26□□□□□ -1.73
CCL1YPR025C TY2A-LR1P0C2J4 438 aa4.25□□□□□ -1.73
CCL1YPR025C TY2A-FP0CX61 438 aa4.25□□□□□ -1.73
CCL1YPR025C TY2A-GR2P0CX62 438 aa4.25□□□□□ -1.73
CCL1YPR025C TY2A-CP25383 438 aa4.25□□□□□ -1.73
CCL1YPR025C LRE1P25579 583 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms