RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W YML119WQ03208 357 aa5.33□□□□□ -1.56
VPS28YPL065W BSP1Q06604 576 aa5.33□□□□□ -1.56
VPS28YPL065W BIK1P11709 440 aa5.32□□□□□ -1.56
VPS28YPL065W URE2P23202 354 aaKnown RBP5.32□□□□□ -1.56
VPS28YPL065W JHD1P40034 492 aa5.32□□□□□ -1.56
VPS28YPL065W RRT6P53117 311 aaPredicted RBP5.32□□□□□ -1.56
VPS28YPL065W IDP3P53982 420 aaKnown RBP5.32□□□□□ -1.56
VPS28YPL065W YPL108WQ02872 168 aaPredicted RBP5.32□□□□□ -1.56
VPS28YPL065W RSC9Q03124 581 aa5.32□□□□□ -1.56
VPS28YPL065W SSP2Q08646 371 aa5.32□□□□□ -1.56
VPS28YPL065W PRS5Q12265 496 aaKnown RBP5.32□□□□□ -1.56
VPS28YPL065W RDL1Q12305 139 aaKnown RBP5.32□□□□□ -1.56
VPS28YPL065W PCD1Q12524 340 aa5.32□□□□□ -1.56
VPS28YPL065W AAC1P04710 309 aa5.31□□□□□ -1.56
VPS28YPL065W PET122P10355 254 aa5.31□□□□□ -1.56
VPS28YPL065W SWE1P32944 819 aa5.31□□□□□ -1.56
VPS28YPL065W BST1P43571 1029 aa5.31□□□□□ -1.56
VPS28YPL065W IRC8P47046 822 aa5.31□□□□□ -1.56
VPS28YPL065W WAR1Q03631 944 aa5.31□□□□□ -1.56
VPS28YPL065W TFC6Q06339 672 aa5.31□□□□□ -1.56
VPS28YPL065W YER175W-AQ8TGU4 54 aa5.31□□□□□ -1.56
VPS28YPL065W SEC3P33332 1336 aaKnown RBP5.3□□□□□ -1.56
VPS28YPL065W SNF1P06782 633 aaKnown RBP5.3□□□□□ -1.56
VPS28YPL065W AMD2P22580 549 aa5.3□□□□□ -1.56
VPS28YPL065W SSH4P32343 579 aa5.3□□□□□ -1.56
VPS28YPL065W XRS2P33301 854 aa5.3□□□□□ -1.56
VPS28YPL065W LNP1P38878 278 aa5.3□□□□□ -1.56
VPS28YPL065W VPS8P39702 1274 aa5.3□□□□□ -1.56
VPS28YPL065W VID27P40157 782 aa5.3□□□□□ -1.56
VPS28YPL065W PCI8P40512 444 aa5.3□□□□□ -1.56
VPS28YPL065W UBP16Q02863 499 aa5.3□□□□□ -1.56
VPS28YPL065W STP3Q05937 343 aa5.3□□□□□ -1.56
VPS28YPL065W PCL8Q08966 492 aa5.3□□□□□ -1.56
VPS28YPL065W TRM8Q12009 286 aa5.3□□□□□ -1.56
VPS28YPL065W COX17Q12287 69 aa5.3□□□□□ -1.56
VPS28YPL065W PNO1Q99216 274 aaKnown RBP5.3□□□□□ -1.56
VPS28YPL065W GDA1P32621 518 aa5.29□□□□□ -1.56
VPS28YPL065W MRPL36P36531 177 aa5.29□□□□□ -1.56
VPS28YPL065W NPR3P38742 1146 aa5.29□□□□□ -1.56
VPS28YPL065W MTG2P38860 518 aa5.29□□□□□ -1.56
VPS28YPL065W TDA10P42938 290 aa5.29□□□□□ -1.56
VPS28YPL065W ZAP1P47043 880 aa5.29□□□□□ -1.56
VPS28YPL065W SUB1P54000 292 aaKnown RBP5.29□□□□□ -1.56
VPS28YPL065W TDA9Q04545 1251 aa5.29□□□□□ -1.56
VPS28YPL065W CSR1Q06705 408 aaKnown RBP5.29□□□□□ -1.56
VPS28YPL065W YDL121CQ07541 149 aa5.29□□□□□ -1.56
VPS28YPL065W URK1P27515 501 aa5.28□□□□□ -1.56
VPS28YPL065W CTF18P49956 741 aa5.28□□□□□ -1.56
VPS28YPL065W SCW4P53334 386 aaKnown RBP5.28□□□□□ -1.56
VPS28YPL065W VID22Q05934 901 aa5.28□□□□□ -1.56
VPS28YPL065W SPN1Q06505 410 aaPredicted RBP5.28□□□□□ -1.56
VPS28YPL065W CRT10Q08226 957 aa5.28□□□□□ -1.56
VPS28YPL065W Q0010Q9ZZX9 128 aa5.28□□□□□ -1.56
VPS28YPL065W GUK1P15454 187 aaKnown RBP5.27□□□□□ -1.57
VPS28YPL065W GCD7P32502 381 aaPredicted RBP5.27□□□□□ -1.57
VPS28YPL065W SLC1P33333 303 aa5.27□□□□□ -1.57
VPS28YPL065W ASK1P35734 292 aa5.27□□□□□ -1.57
VPS28YPL065W AXL2P38928 823 aa5.27□□□□□ -1.57
VPS28YPL065W YML053CQ04978 212 aa5.27□□□□□ -1.57
VPS28YPL065W YDL242WQ07746 117 aa5.27□□□□□ -1.57
VPS28YPL065W BI2P03873 423 aa5.26□□□□□ -1.57
VPS28YPL065W CHO2P05374 869 aaKnown RBP5.26□□□□□ -1.57
VPS28YPL065W TPK1P06244 397 aa5.26□□□□□ -1.57
VPS28YPL065W SWC3P31376 625 aa5.26□□□□□ -1.57
VPS28YPL065W RRN3P36070 627 aa5.26□□□□□ -1.57
VPS28YPL065W RAD26P40352 1085 aa5.26□□□□□ -1.57
VPS28YPL065W MEP2P41948 499 aa5.26□□□□□ -1.57
VPS28YPL065W SKP2P42843 763 aa5.26□□□□□ -1.57
VPS28YPL065W VAM6Q07468 1049 aa5.26□□□□□ -1.57
VPS28YPL065W NEW1Q08972 1196 aaKnown RBP5.26□□□□□ -1.57
VPS28YPL065W CRC1Q12289 327 aa5.26□□□□□ -1.57
VPS28YPL065W PFK2P16862 959 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
VPS28YPL065W PDE1P22434 369 aa5.25□□□□□ -1.57
VPS28YPL065W RAD16P31244 790 aa5.25□□□□□ -1.57
VPS28YPL065W MCM10P32354 571 aa5.25□□□□□ -1.57
VPS28YPL065W MAM1P40065 302 aa5.25□□□□□ -1.57
VPS28YPL065W COG1P53079 417 aa5.25□□□□□ -1.57
VPS28YPL065W YNL058CP53947 316 aa5.25□□□□□ -1.57
VPS28YPL065W RAD33Q04231 177 aa5.25□□□□□ -1.57
VPS28YPL065W TPO3Q06451 622 aa5.25□□□□□ -1.57
VPS28YPL065W AHA1Q12449 350 aaKnown RBP5.25□□□□□ -1.57
VPS28YPL065W NKP1Q12493 238 aa5.25□□□□□ -1.57
VPS28YPL065W YLR111WQ12528 110 aa5.25□□□□□ -1.57
VPS28YPL065W YBR255C-AQ3E776 120 aa5.25□□□□□ -1.57
VPS28YPL065W ATP2P00830 511 aaKnown RBP5.24□□□□□ -1.57
VPS28YPL065W RRP43P25359 394 aaPredicted RBP5.24□□□□□ -1.57
VPS28YPL065W UME6P39001 836 aa5.24□□□□□ -1.57
VPS28YPL065W SAP1P39955 897 aaKnown RBP5.24□□□□□ -1.57
VPS28YPL065W BUD16P39988 312 aa5.24□□□□□ -1.57
VPS28YPL065W KAP123P40069 1113 aaKnown RBP5.24□□□□□ -1.57
VPS28YPL065W PSP1P50896 841 aaKnown RBP5.24□□□□□ -1.57
VPS28YPL065W YGR079WP53249 370 aa5.24□□□□□ -1.57
VPS28YPL065W MEP3P53390 489 aa5.24□□□□□ -1.57
VPS28YPL065W YPL071CQ02864 156 aa5.24□□□□□ -1.57
VPS28YPL065W MTG1Q03151 367 aaPredicted RBP5.24□□□□□ -1.57
VPS28YPL065W LCB4Q12246 624 aa5.24□□□□□ -1.57
VPS28YPL065W RVB2Q12464 471 aaKnown RBP5.24□□□□□ -1.57
VPS28YPL065W KGD2P19262 463 aaPredicted RBP5.23□□□□□ -1.57
VPS28YPL065W YAP1P19880 650 aaKnown RBP5.23□□□□□ -1.57
VPS28YPL065W RER1P25560 188 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 89.9 ms