RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W UBP7P40453 1071 aa3.7□□□□□ -1.82
SRP1YNL189W CTF18P49956 741 aa3.7□□□□□ -1.82
SRP1YNL189W IMD3P50095 523 aaKnown RBP3.7□□□□□ -1.82
SRP1YNL189W PSP1P50896 841 aaKnown RBP3.7□□□□□ -1.82
SRP1YNL189W COG1P53079 417 aa3.7□□□□□ -1.82
SRP1YNL189W LGE1Q02796 332 aaKnown RBP3.7□□□□□ -1.82
SRP1YNL189W VID22Q05934 901 aa3.7□□□□□ -1.82
SRP1YNL189W SLK19Q08581 821 aaKnown RBP3.7□□□□□ -1.82
SRP1YNL189W RVB2Q12464 471 aaKnown RBP3.7□□□□□ -1.82
SRP1YNL189W ATP2P00830 511 aaKnown RBP3.7□□□□□ -1.82
SRP1YNL189W ERG11P10614 530 aa3.7□□□□□ -1.82
SRP1YNL189W SIP1P32578 815 aa3.7□□□□□ -1.82
SRP1YNL189W XRS2P33301 854 aa3.7□□□□□ -1.82
SRP1YNL189W VBA2P38358 474 aaKnown RBP3.7□□□□□ -1.82
SRP1YNL189W NPR3P38742 1146 aa3.7□□□□□ -1.82
SRP1YNL189W PSD1P39006 500 aa3.7□□□□□ -1.82
SRP1YNL189W FAF1P40546 346 aaPredicted RBP3.7□□□□□ -1.82
SRP1YNL189W IML2P47031 731 aa3.7□□□□□ -1.82
SRP1YNL189W MTG1Q03151 367 aaPredicted RBP3.7□□□□□ -1.82
SRP1YNL189W RAD34Q06665 692 aa3.7□□□□□ -1.82
SRP1YNL189W CSR1Q06705 408 aaKnown RBP3.7□□□□□ -1.82
SRP1YNL189W YMR084WA2P2R3 262 aa3.69□□□□□ -1.82
SRP1YNL189W TPK1P06244 397 aa3.69□□□□□ -1.82
SRP1YNL189W GCD7P32502 381 aaPredicted RBP3.69□□□□□ -1.82
SRP1YNL189W RPF2P36160 344 aaKnown RBP3.69□□□□□ -1.82
SRP1YNL189W OPT1P40897 799 aa3.69□□□□□ -1.82
SRP1YNL189W SKP2P42843 763 aa3.69□□□□□ -1.82
SRP1YNL189W CSL4P53859 292 aaPredicted RBP3.69□□□□□ -1.82
SRP1YNL189W TMA16Q08687 178 aa3.69□□□□□ -1.82
SRP1YNL189W TY2A-LR1P0C2J4 438 aa3.68□□□□□ -1.82
SRP1YNL189W TY2A-FP0CX61 438 aa3.68□□□□□ -1.82
SRP1YNL189W TY2A-GR2P0CX62 438 aa3.68□□□□□ -1.82
SRP1YNL189W HOM2P13663 365 aaKnown RBP3.68□□□□□ -1.82
SRP1YNL189W YSP3P25036 478 aa3.68□□□□□ -1.82
SRP1YNL189W TY2A-CP25383 438 aa3.68□□□□□ -1.82
SRP1YNL189W KES1P35844 434 aaKnown RBP3.68□□□□□ -1.82
SRP1YNL189W MRPL36P36531 177 aa3.68□□□□□ -1.82
SRP1YNL189W ERV46P39727 415 aa3.68□□□□□ -1.82
SRP1YNL189W VID27P40157 782 aa3.68□□□□□ -1.82
SRP1YNL189W TY2A-DR2Q03483 438 aa3.68□□□□□ -1.82
SRP1YNL189W YDR109CQ04585 715 aa3.68□□□□□ -1.82
SRP1YNL189W GTB1Q04924 702 aa3.68□□□□□ -1.82
SRP1YNL189W THI7Q05998 598 aa3.68□□□□□ -1.82
SRP1YNL189W BUD21Q08492 214 aaPredicted RBP3.68□□□□□ -1.82
SRP1YNL189W TY2A-BQ12260 438 aa3.68□□□□□ -1.82
SRP1YNL189W TY2A-OR2Q12293 438 aa3.68□□□□□ -1.82
SRP1YNL189W RDL1Q12305 139 aaKnown RBP3.68□□□□□ -1.82
SRP1YNL189W TY2A-DR1Q12392 438 aa3.68□□□□□ -1.82
SRP1YNL189W TY2A-OR1Q12439 438 aa3.68□□□□□ -1.82
SRP1YNL189W YLR111WQ12528 110 aa3.68□□□□□ -1.82
SRP1YNL189W TY2A-DR3Q99303 438 aa3.68□□□□□ -1.82
SRP1YNL189W NUP1P20676 1076 aa3.67□□□□□ -1.82
SRP1YNL189W MAK32P23060 363 aa3.67□□□□□ -1.82
SRP1YNL189W ILV6P25605 309 aaKnown RBP3.67□□□□□ -1.82
SRP1YNL189W GSY2P27472 705 aa3.67□□□□□ -1.82
SRP1YNL189W RAD16P31244 790 aa3.67□□□□□ -1.82
SRP1YNL189W GSH1P32477 678 aa3.67□□□□□ -1.82
SRP1YNL189W SLC1P33333 303 aa3.67□□□□□ -1.82
SRP1YNL189W HES1P35843 434 aa3.67□□□□□ -1.82
SRP1YNL189W ATF1P40353 525 aa3.67□□□□□ -1.82
SRP1YNL189W ADE16P54113 591 aaKnown RBP3.67□□□□□ -1.82
SRP1YNL189W REG1Q00816 1014 aa3.67□□□□□ -1.82
SRP1YNL189W SNO4Q04902 237 aa3.67□□□□□ -1.82
SRP1YNL189W HSP33Q08914 237 aaKnown RBP3.67□□□□□ -1.82
SRP1YNL189W NEW1Q08972 1196 aaKnown RBP3.67□□□□□ -1.82
SRP1YNL189W HSP32Q08992 237 aa3.67□□□□□ -1.82
SRP1YNL189W MBR1P23493 339 aa3.66□□□□□ -1.82
SRP1YNL189W LAC1P28496 418 aa3.66□□□□□ -1.82
SRP1YNL189W SWC3P31376 625 aa3.66□□□□□ -1.82
SRP1YNL189W RRN3P36070 627 aa3.66□□□□□ -1.82
SRP1YNL189W CUE2P36075 443 aaKnown RBP3.66□□□□□ -1.82
SRP1YNL189W FUN12P39730 1002 aaKnown RBP3.66□□□□□ -1.82
SRP1YNL189W MSY1P48527 492 aa3.66□□□□□ -1.82
SRP1YNL189W MEP3P53390 489 aa3.66□□□□□ -1.82
SRP1YNL189W YPR003CP53394 754 aa3.66□□□□□ -1.82
SRP1YNL189W YNR061CP53747 219 aa3.66□□□□□ -1.82
SRP1YNL189W TOP1P04786 769 aa3.66□□□□□ -1.82
SRP1YNL189W PCT1P13259 424 aa3.66□□□□□ -1.82
SRP1YNL189W MCM10P32354 571 aa3.66□□□□□ -1.82
SRP1YNL189W YAT1P80235 687 aa3.66□□□□□ -1.82
SRP1YNL189W YOR389WQ08912 624 aa3.66□□□□□ -1.82
SRP1YNL189W YPL191CQ08930 360 aa3.66□□□□□ -1.82
SRP1YNL189W SWT1Q12104 458 aa3.66□□□□□ -1.82
SRP1YNL189W ILV2P07342 687 aaKnown RBP3.65□□□□□ -1.83
SRP1YNL189W PFK2P16862 959 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
SRP1YNL189W ERG8P24521 451 aa3.65□□□□□ -1.83
SRP1YNL189W LRE1P25579 583 aaKnown RBP3.65□□□□□ -1.83
SRP1YNL189W PTC6P25646 442 aa3.65□□□□□ -1.83
SRP1YNL189W TEF4P36008 412 aaKnown RBP3.65□□□□□ -1.83
SRP1YNL189W FTH1P38310 465 aa3.65□□□□□ -1.83
SRP1YNL189W UME6P39001 836 aa3.65□□□□□ -1.83
SRP1YNL189W YER010CP40011 234 aa3.65□□□□□ -1.83
SRP1YNL189W FMP10P40098 244 aa3.65□□□□□ -1.83
SRP1YNL189W DPH1P40487 425 aaKnown RBP3.65□□□□□ -1.83
SRP1YNL189W CIN1P40987 1014 aa3.65□□□□□ -1.83
SRP1YNL189W UBX6P47049 396 aa3.65□□□□□ -1.83
SRP1YNL189W ATP23P53722 227 aa3.65□□□□□ -1.83
SRP1YNL189W AAT1Q01802 451 aa3.65□□□□□ -1.83
SRP1YNL189W SPN1Q06505 410 aaPredicted RBP3.65□□□□□ -1.83
SRP1YNL189W BSP1Q06604 576 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 141.8 ms