RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C YML053CQ04978 212 aa5.61□□□□□ -1.51
CTF18YMR078C OPY2Q06810 360 aa5.61□□□□□ -1.51
CTF18YMR078C ULA1Q12059 462 aa5.61□□□□□ -1.51
CTF18YMR078C ATP2P00830 511 aaKnown RBP5.6□□□□□ -1.51
CTF18YMR078C YML003WP0CF16 290 aa5.6□□□□□ -1.51
CTF18YMR078C MTG2P38860 518 aa5.6□□□□□ -1.51
CTF18YMR078C PSD1P39006 500 aa5.6□□□□□ -1.51
CTF18YMR078C EXO1P39875 702 aa5.6□□□□□ -1.51
CTF18YMR078C PAC2P39937 518 aa5.6□□□□□ -1.51
CTF18YMR078C GFD1Q04839 188 aaKnown RBP5.6□□□□□ -1.51
CTF18YMR078C SNO4Q04902 237 aa5.6□□□□□ -1.51
CTF18YMR078C HSP33Q08914 237 aaKnown RBP5.6□□□□□ -1.51
CTF18YMR078C HSP32Q08992 237 aa5.6□□□□□ -1.51
CTF18YMR078C YDR056CQ12025 205 aa5.6□□□□□ -1.51
CTF18YMR078C RPN13O13563 156 aa5.6□□□□□ -1.51
CTF18YMR078C ADY2P25613 283 aa5.6□□□□□ -1.51
CTF18YMR078C MRPL9P31334 269 aa5.6□□□□□ -1.51
CTF18YMR078C RVB2Q12464 471 aaKnown RBP5.6□□□□□ -1.51
CTF18YMR078C TEF4P36008 412 aaKnown RBP5.59□□□□□ -1.51
CTF18YMR078C SAP1P39955 897 aaKnown RBP5.59□□□□□ -1.51
CTF18YMR078C FMP10P40098 244 aa5.59□□□□□ -1.51
CTF18YMR078C RAD16P31244 790 aa5.59□□□□□ -1.52
CTF18YMR078C SKP2P42843 763 aa5.59□□□□□ -1.52
CTF18YMR078C YNR061CP53747 219 aa5.59□□□□□ -1.52
CTF18YMR078C TMA16Q08687 178 aa5.59□□□□□ -1.52
CTF18YMR078C AHA1Q12449 350 aaKnown RBP5.59□□□□□ -1.52
CTF18YMR078C COX1P00401 534 aa5.58□□□□□ -1.52
CTF18YMR078C RPA135P22138 1203 aaKnown RBP5.58□□□□□ -1.52
CTF18YMR078C LRE1P25579 583 aaKnown RBP5.58□□□□□ -1.52
CTF18YMR078C UME6P39001 836 aa5.58□□□□□ -1.52
CTF18YMR078C STU2P46675 888 aa5.58□□□□□ -1.52
CTF18YMR078C COG2P53271 262 aa5.58□□□□□ -1.52
CTF18YMR078C AI5_ALPHAQ9ZZX1 630 aa5.58□□□□□ -1.52
CTF18YMR078C SES1P07284 462 aaKnown RBP5.58□□□□□ -1.52
CTF18YMR078C YSP3P25036 478 aa5.58□□□□□ -1.52
CTF18YMR078C RFA2P26754 273 aaKnown RBP5.58□□□□□ -1.52
CTF18YMR078C SWC3P31376 625 aa5.58□□□□□ -1.52
CTF18YMR078C GCD7P32502 381 aaPredicted RBP5.58□□□□□ -1.52
CTF18YMR078C RPT3P33298 428 aaKnown RBP5.58□□□□□ -1.52
CTF18YMR078C FLO10P36170 1169 aa5.58□□□□□ -1.52
CTF18YMR078C LAS21P40367 830 aa5.58□□□□□ -1.52
CTF18YMR078C MNT3P40549 630 aa5.58□□□□□ -1.52
CTF18YMR078C PLM2Q04383 521 aa5.58□□□□□ -1.52
CTF18YMR078C AQY1P0CD91 305 aa5.57□□□□□ -1.52
CTF18YMR078C MUD2P36084 527 aaKnown RBP5.57□□□□□ -1.52
CTF18YMR078C CBK1P53894 756 aa5.57□□□□□ -1.52
CTF18YMR078C APM1Q00776 475 aaPredicted RBP5.57□□□□□ -1.52
CTF18YMR078C VPS72Q03388 795 aa5.57□□□□□ -1.52
CTF18YMR078C CYK3Q07533 885 aa5.57□□□□□ -1.52
CTF18YMR078C VCX1Q99385 411 aa5.57□□□□□ -1.52
CTF18YMR078C PFK2P16862 959 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
CTF18YMR078C HES1P35843 434 aa5.56□□□□□ -1.52
CTF18YMR078C REG1Q00816 1014 aa5.56□□□□□ -1.52
CTF18YMR078C ADE5,7P07244 802 aaKnown RBP5.56□□□□□ -1.52
CTF18YMR078C IST3P40565 148 aaPredicted RBP5.56□□□□□ -1.52
CTF18YMR078C YMR018WQ04364 514 aa5.56□□□□□ -1.52
CTF18YMR078C SWT1Q12104 458 aa5.56□□□□□ -1.52
CTF18YMR078C RPB2P08518 1224 aaKnown RBP5.55□□□□□ -1.52
CTF18YMR078C SPO11P23179 398 aa5.55□□□□□ -1.52
CTF18YMR078C ERG8P24521 451 aa5.55□□□□□ -1.52
CTF18YMR078C CHS3P29465 1165 aa5.55□□□□□ -1.52
CTF18YMR078C MRP20P32387 263 aa5.55□□□□□ -1.52
CTF18YMR078C CNS1P33313 385 aa5.55□□□□□ -1.52
CTF18YMR078C NUP120P35729 1037 aa5.55□□□□□ -1.52
CTF18YMR078C RPF2P36160 344 aaKnown RBP5.55□□□□□ -1.52
CTF18YMR078C VBA2P38358 474 aaKnown RBP5.55□□□□□ -1.52
CTF18YMR078C NAB3P38996 802 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
CTF18YMR078C RIC1P40395 1056 aa5.55□□□□□ -1.52
CTF18YMR078C BNR1P40450 1375 aa5.55□□□□□ -1.52
CTF18YMR078C UBP7P40453 1071 aa5.55□□□□□ -1.52
CTF18YMR078C SAE2P46946 345 aa5.55□□□□□ -1.52
CTF18YMR078C RAD34Q06665 692 aa5.55□□□□□ -1.52
CTF18YMR078C PCT1P13259 424 aa5.55□□□□□ -1.52
CTF18YMR078C SIP1P32578 815 aa5.55□□□□□ -1.52
CTF18YMR078C SIP4P46954 829 aa5.55□□□□□ -1.52
CTF18YMR078C MSY1P48527 492 aa5.55□□□□□ -1.52
CTF18YMR078C ASE1P50275 885 aa5.55□□□□□ -1.52
CTF18YMR078C TMA64Q04600 565 aaKnown RBP5.55□□□□□ -1.52
CTF18YMR078C ATG23Q06671 453 aa5.55□□□□□ -1.52
CTF18YMR078C YPL191CQ08930 360 aa5.55□□□□□ -1.52
CTF18YMR078C RTC1Q08281 1341 aa5.54□□□□□ -1.52
CTF18YMR078C YMR084WA2P2R3 262 aa5.54□□□□□ -1.52
CTF18YMR078C KES1P35844 434 aaKnown RBP5.54□□□□□ -1.52
CTF18YMR078C OPT1P40897 799 aa5.54□□□□□ -1.52
CTF18YMR078C YKU80Q04437 629 aa5.54□□□□□ -1.52
CTF18YMR078C ARO10Q06408 635 aa5.54□□□□□ -1.52
CTF18YMR078C FUM1P08417 488 aaKnown RBP5.54□□□□□ -1.52
CTF18YMR078C YIL161WP40449 235 aaKnown RBP5.54□□□□□ -1.52
CTF18YMR078C UPF3P48412 387 aaKnown RBP5.54□□□□□ -1.52
CTF18YMR078C PSK2Q08217 1101 aa5.54□□□□□ -1.52
CTF18YMR078C HEM1P09950 548 aaPredicted RBP5.53□□□□□ -1.52
CTF18YMR078C SPO16P17122 198 aa5.53□□□□□ -1.52
CTF18YMR078C LAC1P28496 418 aa5.53□□□□□ -1.52
CTF18YMR078C RRI2Q12348 645 aa5.53□□□□□ -1.52
CTF18YMR078C YLR302CO13544 120 aa5.52□□□□□ -1.53
CTF18YMR078C GSH1P32477 678 aa5.52□□□□□ -1.53
CTF18YMR078C FUN12P39730 1002 aaKnown RBP5.52□□□□□ -1.53
CTF18YMR078C VPS4P52917 437 aa5.52□□□□□ -1.53
CTF18YMR078C FMP30Q02883 468 aa5.52□□□□□ -1.53
CTF18YMR078C SAN1P22470 610 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms