RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C MRS6P32864 603 aaKnown RBP3.73□□□□□ -1.81
RPN13YLR421C MPE1P35728 441 aaKnown RBP3.73□□□□□ -1.81
RPN13YLR421C YMR124WP39523 943 aaKnown RBP3.73□□□□□ -1.81
RPN13YLR421C RPS0BP46654 252 aaKnown RBP3.73□□□□□ -1.81
RPN13YLR421C ENP2P48234 707 aaKnown RBP3.73□□□□□ -1.81
RPN13YLR421C CNM67P53865 581 aaKnown RBP3.73□□□□□ -1.81
RPN13YLR421C SQS1P53866 767 aaKnown RBP3.73□□□□□ -1.81
RPN13YLR421C SKY1Q03656 742 aa3.73□□□□□ -1.81
RPN13YLR421C PHM6Q05637 104 aa3.73□□□□□ -1.81
RPN13YLR421C CYK3Q07533 885 aa3.73□□□□□ -1.81
RPN13YLR421C RMP1Q12530 201 aa3.73□□□□□ -1.81
RPN13YLR421C RTP1Q12751 981 aa3.73□□□□□ -1.81
RPN13YLR421C GDB1Q06625 1536 aa3.73□□□□□ -1.81
RPN13YLR421C TY3B-IQ7LHG5 1498 aaKnown RBP3.73□□□□□ -1.81
RPN13YLR421C TUF1P02992 437 aaKnown RBP3.72□□□□□ -1.81
RPN13YLR421C YER190C-BP0CX94 160 aa3.72□□□□□ -1.81
RPN13YLR421C YEL077W-AP0CX95 160 aa3.72□□□□□ -1.81
RPN13YLR421C YGR296C-BP0CX96 160 aa3.72□□□□□ -1.81
RPN13YLR421C YPL283W-BP0CX97 160 aa3.72□□□□□ -1.81
RPN13YLR421C YPR204C-AP0CX98 160 aa3.72□□□□□ -1.81
RPN13YLR421C BET2P20133 325 aa3.72□□□□□ -1.81
RPN13YLR421C DAL3P32459 195 aa3.72□□□□□ -1.81
RPN13YLR421C DSS4P32601 143 aa3.72□□□□□ -1.81
RPN13YLR421C NFU1P32860 256 aa3.72□□□□□ -1.81
RPN13YLR421C FLO5P38894 1075 aa3.72□□□□□ -1.81
RPN13YLR421C SAP185P40856 1058 aa3.72□□□□□ -1.81
RPN13YLR421C IRC7P43623 340 aa3.72□□□□□ -1.81
RPN13YLR421C CWC22P53333 577 aaKnown RBP3.72□□□□□ -1.81
RPN13YLR421C COP1P53622 1201 aaKnown RBP3.72□□□□□ -1.81
RPN13YLR421C YML131WQ03102 365 aa3.72□□□□□ -1.81
RPN13YLR421C PEX15Q08215 383 aa3.72□□□□□ -1.81
RPN13YLR421C NEW1Q08972 1196 aaKnown RBP3.72□□□□□ -1.81
RPN13YLR421C TY2B-BQ12491 1770 aa3.71□□□□□ -1.81
RPN13YLR421C PCT1P13259 424 aa3.71□□□□□ -1.82
RPN13YLR421C APA1P16550 321 aaKnown RBP3.71□□□□□ -1.82
RPN13YLR421C MGM1P32266 881 aa3.71□□□□□ -1.82
RPN13YLR421C DBF20P32328 564 aa3.71□□□□□ -1.82
RPN13YLR421C GCS1P35197 352 aa3.71□□□□□ -1.82
RPN13YLR421C HIS6P40545 261 aa3.71□□□□□ -1.82
RPN13YLR421C DJP1P40564 432 aa3.71□□□□□ -1.82
RPN13YLR421C MAF1P41910 395 aa3.71□□□□□ -1.82
RPN13YLR421C PUS4P48567 403 aaKnown RBP3.71□□□□□ -1.82
RPN13YLR421C SLD3P53135 668 aa3.71□□□□□ -1.82
RPN13YLR421C NUP53Q03790 475 aa3.71□□□□□ -1.82
RPN13YLR421C MRPL1Q04599 285 aa3.71□□□□□ -1.82
RPN13YLR421C NUP157P40064 1391 aaKnown RBP3.71□□□□□ -1.82
RPN13YLR421C COX11P19516 300 aaKnown RBP3.7□□□□□ -1.82
RPN13YLR421C IMP2'P32351 346 aa3.7□□□□□ -1.82
RPN13YLR421C RPT2P40327 437 aaKnown RBP3.7□□□□□ -1.82
RPN13YLR421C CFD1P40558 293 aa3.7□□□□□ -1.82
RPN13YLR421C QRI7P43122 407 aa3.7□□□□□ -1.82
RPN13YLR421C YNL092WP53934 400 aa3.7□□□□□ -1.82
RPN13YLR421C TRS130Q03660 1102 aa3.7□□□□□ -1.82
RPN13YLR421C CIA1Q05583 330 aa3.7□□□□□ -1.82
RPN13YLR421C OPY2Q06810 360 aa3.7□□□□□ -1.82
RPN13YLR421C CDC45Q08032 650 aa3.7□□□□□ -1.82
RPN13YLR421C NGL1Q08213 363 aaKnown RBP3.7□□□□□ -1.82
RPN13YLR421C PNO1Q99216 274 aaKnown RBP3.7□□□□□ -1.82
RPN13YLR421C SNT2P53127 1403 aa3.7□□□□□ -1.82
RPN13YLR421C ARO1P08566 1588 aaKnown RBP3.69□□□□□ -1.82
RPN13YLR421C RPP0P05317 312 aaKnown RBP3.69□□□□□ -1.82
RPN13YLR421C SEC12P11655 471 aa3.69□□□□□ -1.82
RPN13YLR421C PET309P32522 965 aaPredicted RBP3.69□□□□□ -1.82
RPN13YLR421C GDA1P32621 518 aa3.69□□□□□ -1.82
RPN13YLR421C SER1P33330 395 aaKnown RBP3.69□□□□□ -1.82
RPN13YLR421C CEG1Q01159 459 aaPredicted RBP3.69□□□□□ -1.82
RPN13YLR421C MDM1Q01846 1127 aa3.69□□□□□ -1.82
RPN13YLR421C RAD33Q04231 177 aa3.69□□□□□ -1.82
RPN13YLR421C SSP2Q08646 371 aa3.69□□□□□ -1.82
RPN13YLR421C RVB2Q12464 471 aaKnown RBP3.69□□□□□ -1.82
RPN13YLR421C YOL087CQ99247 1116 aa3.69□□□□□ -1.82
RPN13YLR421C TRM3Q07527 1436 aa3.69□□□□□ -1.82
RPN13YLR421C ATP12P22135 325 aa3.68□□□□□ -1.82
RPN13YLR421C MSM1P22438 575 aa3.68□□□□□ -1.82
RPN13YLR421C MSP1P28737 362 aa3.68□□□□□ -1.82
RPN13YLR421C CDC5P32562 705 aa3.68□□□□□ -1.82
RPN13YLR421C IMD2P38697 523 aaKnown RBP3.68□□□□□ -1.82
RPN13YLR421C IMD3P50095 523 aaKnown RBP3.68□□□□□ -1.82
RPN13YLR421C SNU56Q03782 492 aaKnown RBP3.68□□□□□ -1.82
RPN13YLR421C PDS5Q04264 1277 aa3.68□□□□□ -1.82
RPN13YLR421C SNA4Q07549 140 aa3.68□□□□□ -1.82
RPN13YLR421C CRT10Q08226 957 aa3.68□□□□□ -1.82
RPN13YLR421C YPR027CQ12079 277 aa3.68□□□□□ -1.82
RPN13YLR421C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
RPN13YLR421C NOP58Q12499 511 aaKnown RBP3.68□□□□□ -1.82
RPN13YLR421C DNF2Q12675 1612 aa3.68□□□□□ -1.82
RPN13YLR421C VTH1P40438 1549 aa3.68□□□□□ -1.82
RPN13YLR421C VTH2P40890 1549 aa3.68□□□□□ -1.82
RPN13YLR421C CAT8P39113 1433 aa3.68□□□□□ -1.82
RPN13YLR421C PDR12Q02785 1511 aa3.67□□□□□ -1.82
RPN13YLR421C YCP4P25349 247 aaKnown RBP3.67□□□□□ -1.82
RPN13YLR421C COQ3P27680 312 aa3.67□□□□□ -1.82
RPN13YLR421C SRB7P47822 140 aa3.67□□□□□ -1.82
RPN13YLR421C LYS20P48570 428 aaKnown RBP3.67□□□□□ -1.82
RPN13YLR421C RNR4P49723 345 aaKnown RBP3.67□□□□□ -1.82
RPN13YLR421C TAN1P53072 289 aaPredicted RBP3.67□□□□□ -1.82
RPN13YLR421C PEF1P53238 335 aa3.67□□□□□ -1.82
RPN13YLR421C RPL15BP54780 204 aaPredicted RBP3.67□□□□□ -1.82
RPN13YLR421C ERP4Q12450 207 aa3.67□□□□□ -1.82
RPN13YLR421C CDC31P06704 161 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms