RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeastyeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFH1YLR223C STP3Q05937 343 aa1.6□□□□□ -2.15
IFH1YLR223C NEW1Q08972 1196 aaKnown RBP1.6□□□□□ -2.15
IFH1YLR223C COX1P00401 534 aa1.6□□□□□ -2.15
IFH1YLR223C LEU2P04173 364 aaPredicted RBP1.6□□□□□ -2.15
IFH1YLR223C PDE1P22434 369 aa1.6□□□□□ -2.15
IFH1YLR223C YCR061WP25639 631 aa1.6□□□□□ -2.15
IFH1YLR223C ARP2P32381 391 aaKnown RBP1.6□□□□□ -2.15
IFH1YLR223C PSF2P40359 213 aa1.6□□□□□ -2.15
IFH1YLR223C PIF1P07271 859 aa1.6□□□□□ -2.15
IFH1YLR223C NUC1P08466 329 aa1.6□□□□□ -2.15
IFH1YLR223C APA1P16550 321 aaKnown RBP1.6□□□□□ -2.15
IFH1YLR223C RAD16P31244 790 aa1.6□□□□□ -2.15
IFH1YLR223C RPF2P36160 344 aaKnown RBP1.6□□□□□ -2.15
IFH1YLR223C IRC8P47046 822 aa1.6□□□□□ -2.15
IFH1YLR223C YGR079WP53249 370 aa1.6□□□□□ -2.15
IFH1YLR223C RTS3P53289 263 aa1.6□□□□□ -2.15
IFH1YLR223C RVB2Q12464 471 aaKnown RBP1.6□□□□□ -2.15
IFH1YLR223C PET122P10355 254 aa1.59□□□□□ -2.15
IFH1YLR223C SIR1P21691 654 aa1.59□□□□□ -2.15
IFH1YLR223C MCM3P24279 971 aaKnown RBP1.59□□□□□ -2.15
IFH1YLR223C FTH1P38310 465 aa1.59□□□□□ -2.15
IFH1YLR223C YHL041WP38730 149 aa1.59□□□□□ -2.15
IFH1YLR223C COP1P53622 1201 aaKnown RBP1.59□□□□□ -2.15
IFH1YLR223C YDR109CQ04585 715 aa1.59□□□□□ -2.15
IFH1YLR223C IWR1Q07532 353 aaPredicted RBP1.59□□□□□ -2.15
IFH1YLR223C BUD7Q08754 746 aa1.59□□□□□ -2.15
IFH1YLR223C TIP41Q12199 356 aa1.59□□□□□ -2.15
IFH1YLR223C ATP4P05626 244 aa1.59□□□□□ -2.16
IFH1YLR223C SUI3P09064 285 aaKnown RBP1.59□□□□□ -2.16
IFH1YLR223C GCS1P35197 352 aa1.59□□□□□ -2.16
IFH1YLR223C ASK1P35734 292 aa1.59□□□□□ -2.16
IFH1YLR223C MRPL36P36531 177 aa1.59□□□□□ -2.16
IFH1YLR223C SPC72P39723 622 aa1.59□□□□□ -2.16
IFH1YLR223C YAT2P40017 923 aa1.59□□□□□ -2.16
IFH1YLR223C SAE2P46946 345 aa1.59□□□□□ -2.16
IFH1YLR223C TAM41P53230 385 aa1.59□□□□□ -2.16
IFH1YLR223C HRD3Q05787 833 aa1.59□□□□□ -2.16
IFH1YLR223C YDL242WQ07746 117 aa1.59□□□□□ -2.16
IFH1YLR223C LCB4Q12246 624 aa1.59□□□□□ -2.16
IFH1YLR223C COX17Q12287 69 aa1.59□□□□□ -2.16
IFH1YLR223C PFK2P16862 959 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
IFH1YLR223C GSY2P27472 705 aa1.58□□□□□ -2.16
IFH1YLR223C VPS25P47142 202 aa1.58□□□□□ -2.16
IFH1YLR223C TDA9Q04545 1251 aa1.58□□□□□ -2.16
IFH1YLR223C TPK1P06244 397 aa1.58□□□□□ -2.16
IFH1YLR223C MSS18P08593 268 aa1.58□□□□□ -2.16
IFH1YLR223C PGI1P12709 554 aaKnown RBP1.58□□□□□ -2.16
IFH1YLR223C NUP120P35729 1037 aa1.58□□□□□ -2.16
IFH1YLR223C ERR3P42222 437 aa1.58□□□□□ -2.16
IFH1YLR223C TDA10P42938 290 aa1.58□□□□□ -2.16
IFH1YLR223C TRS130Q03660 1102 aa1.58□□□□□ -2.16
IFH1YLR223C BLS1Q06071 122 aa1.58□□□□□ -2.16
IFH1YLR223C AIM6Q07716 390 aa1.58□□□□□ -2.16
IFH1YLR223C RRP6Q12149 733 aaKnown RBP1.58□□□□□ -2.16
IFH1YLR223C CHO2P05374 869 aaKnown RBP1.58□□□□□ -2.16
IFH1YLR223C NOP1P15646 327 aaKnown RBP1.58□□□□□ -2.16
IFH1YLR223C YJU2P28320 278 aaPredicted RBP1.58□□□□□ -2.16
IFH1YLR223C LAC1P28496 418 aa1.58□□□□□ -2.16
IFH1YLR223C MRS6P32864 603 aaKnown RBP1.58□□□□□ -2.16
IFH1YLR223C VBA2P38358 474 aaKnown RBP1.58□□□□□ -2.16
IFH1YLR223C IMD2P38697 523 aaKnown RBP1.58□□□□□ -2.16
IFH1YLR223C VPS8P39702 1274 aa1.58□□□□□ -2.16
IFH1YLR223C PUG1P40100 303 aa1.58□□□□□ -2.16
IFH1YLR223C IMD3P50095 523 aaKnown RBP1.58□□□□□ -2.16
IFH1YLR223C NUP53Q03790 475 aa1.58□□□□□ -2.16
IFH1YLR223C DSE3Q08729 430 aa1.58□□□□□ -2.16
IFH1YLR223C PFA4Q12006 378 aa1.58□□□□□ -2.16
IFH1YLR223C RFA2P26754 273 aaKnown RBP1.57□□□□□ -2.16
IFH1YLR223C YBR138CP38277 524 aa1.57□□□□□ -2.16
IFH1YLR223C ERC1P38767 581 aa1.57□□□□□ -2.16
IFH1YLR223C TPM2P40414 161 aa1.57□□□□□ -2.16
IFH1YLR223C NPA3P47122 385 aa1.57□□□□□ -2.16
IFH1YLR223C ORC5P50874 479 aa1.57□□□□□ -2.16
IFH1YLR223C CPR6P53691 371 aaKnown RBP1.57□□□□□ -2.16
IFH1YLR223C UBX4P54730 416 aa1.57□□□□□ -2.16
IFH1YLR223C FCP1Q03254 732 aa1.57□□□□□ -2.16
IFH1YLR223C BRE1Q07457 700 aaKnown RBP1.57□□□□□ -2.16
IFH1YLR223C SUL2Q12325 893 aa1.57□□□□□ -2.16
IFH1YLR223C RRI1Q12468 440 aa1.57□□□□□ -2.16
IFH1YLR223C URK1P27515 501 aa1.57□□□□□ -2.16
IFH1YLR223C UME6P39001 836 aa1.57□□□□□ -2.16
IFH1YLR223C YIL161WP40449 235 aaKnown RBP1.57□□□□□ -2.16
IFH1YLR223C BST1P43571 1029 aa1.57□□□□□ -2.16
IFH1YLR223C YPT11P48559 417 aa1.57□□□□□ -2.16
IFH1YLR223C PUS4P48567 403 aaKnown RBP1.57□□□□□ -2.16
IFH1YLR223C MTG1Q03151 367 aaPredicted RBP1.57□□□□□ -2.16
IFH1YLR223C SPN1Q06505 410 aaPredicted RBP1.57□□□□□ -2.16
IFH1YLR223C YLR111WQ12528 110 aa1.57□□□□□ -2.16
IFH1YLR223C SSM4P40318 1319 aa1.57□□□□□ -2.16
IFH1YLR223C ATP2P00830 511 aaKnown RBP1.57□□□□□ -2.16
IFH1YLR223C SES1P07284 462 aaKnown RBP1.57□□□□□ -2.16
IFH1YLR223C DBF20P32328 564 aa1.57□□□□□ -2.16
IFH1YLR223C PTH2P34222 208 aa1.57□□□□□ -2.16
IFH1YLR223C FSH1P38777 243 aaKnown RBP1.57□□□□□ -2.16
IFH1YLR223C ACA1P39970 489 aa1.57□□□□□ -2.16
IFH1YLR223C NOP2P40991 618 aaKnown RBP1.57□□□□□ -2.16
IFH1YLR223C SMK1P41808 388 aa1.57□□□□□ -2.16
IFH1YLR223C YAT1P80235 687 aa1.57□□□□□ -2.16
IFH1YLR223C UBX3Q12229 455 aa1.57□□□□□ -2.16
IFH1YLR223C MSM1P22438 575 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 55 ms