RNA–Protein interactions for RNA: YHL035C

VMR1, Transcript of Vacuolar membrane protein, yeastyeast

Gene VMR1, Length 4,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMR1YHL035C YIL161WP40449 235 aaKnown RBP2.22□□□□□ -2.05
VMR1YHL035C PMT6P42934 759 aa2.22□□□□□ -2.05
VMR1YHL035C IST1P53843 298 aaPredicted RBP2.22□□□□□ -2.05
VMR1YHL035C NUS1Q12063 375 aa2.22□□□□□ -2.05
VMR1YHL035C NOP58Q12499 511 aaKnown RBP2.22□□□□□ -2.05
VMR1YHL035C INO80P53115 1489 aa2.22□□□□□ -2.05
VMR1YHL035C SNF1P06782 633 aaKnown RBP2.21□□□□□ -2.06
VMR1YHL035C ADE3P07245 946 aaKnown RBP2.21□□□□□ -2.06
VMR1YHL035C YHR097CP38809 366 aaKnown RBP2.21□□□□□ -2.06
VMR1YHL035C COG2P53271 262 aa2.21□□□□□ -2.06
VMR1YHL035C TIM50Q02776 476 aa2.21□□□□□ -2.06
VMR1YHL035C GIS1Q03833 894 aa2.21□□□□□ -2.06
VMR1YHL035C YPL272CQ08984 517 aa2.21□□□□□ -2.06
VMR1YHL035C LYS21Q12122 440 aaKnown RBP2.21□□□□□ -2.06
VMR1YHL035C Q0010Q9ZZX9 128 aa2.21□□□□□ -2.06
VMR1YHL035C NUC1P08466 329 aa2.21□□□□□ -2.06
VMR1YHL035C SAT4P25333 603 aaKnown RBP2.21□□□□□ -2.06
VMR1YHL035C PAH1P32567 862 aa2.21□□□□□ -2.06
VMR1YHL035C RPC34P32910 317 aa2.21□□□□□ -2.06
VMR1YHL035C ELF1P36053 145 aa2.21□□□□□ -2.06
VMR1YHL035C FLC2P39719 783 aa2.21□□□□□ -2.06
VMR1YHL035C PSF2P40359 213 aa2.21□□□□□ -2.06
VMR1YHL035C SKP2P42843 763 aa2.21□□□□□ -2.06
VMR1YHL035C IRC3Q06683 689 aa2.21□□□□□ -2.06
VMR1YHL035C KIN3P22209 435 aa2.21□□□□□ -2.06
VMR1YHL035C RAD16P31244 790 aa2.21□□□□□ -2.06
VMR1YHL035C GCD7P32502 381 aaPredicted RBP2.21□□□□□ -2.06
VMR1YHL035C EAF7P53911 425 aaKnown RBP2.21□□□□□ -2.06
VMR1YHL035C BUD21Q08492 214 aaPredicted RBP2.21□□□□□ -2.06
VMR1YHL035C MED1Q12321 566 aa2.21□□□□□ -2.06
VMR1YHL035C ERG27Q12452 347 aaKnown RBP2.21□□□□□ -2.06
VMR1YHL035C RVB2Q12464 471 aaKnown RBP2.21□□□□□ -2.06
VMR1YHL035C TY2A-LR1P0C2J4 438 aa2.21□□□□□ -2.06
VMR1YHL035C TY2A-FP0CX61 438 aa2.21□□□□□ -2.06
VMR1YHL035C TY2A-GR2P0CX62 438 aa2.21□□□□□ -2.06
VMR1YHL035C TY2A-CP25383 438 aa2.21□□□□□ -2.06
VMR1YHL035C PRE2P30656 287 aaKnown RBP2.21□□□□□ -2.06
VMR1YHL035C BEM3P32873 1128 aa2.21□□□□□ -2.06
VMR1YHL035C SLC1P33333 303 aa2.21□□□□□ -2.06
VMR1YHL035C MEP3P53390 489 aa2.21□□□□□ -2.06
VMR1YHL035C YAT1P80235 687 aa2.21□□□□□ -2.06
VMR1YHL035C TY2A-DR2Q03483 438 aa2.21□□□□□ -2.06
VMR1YHL035C TY2A-BQ12260 438 aa2.21□□□□□ -2.06
VMR1YHL035C TY2A-OR2Q12293 438 aa2.21□□□□□ -2.06
VMR1YHL035C RDL1Q12305 139 aaKnown RBP2.21□□□□□ -2.06
VMR1YHL035C SCM3Q12334 223 aa2.21□□□□□ -2.06
VMR1YHL035C TY2A-DR1Q12392 438 aa2.21□□□□□ -2.06
VMR1YHL035C TY2A-OR1Q12439 438 aa2.21□□□□□ -2.06
VMR1YHL035C TY2A-DR3Q99303 438 aa2.21□□□□□ -2.06
VMR1YHL035C APA1P16550 321 aaKnown RBP2.2□□□□□ -2.06
VMR1YHL035C MAK32P23060 363 aa2.2□□□□□ -2.06
VMR1YHL035C MCM10P32354 571 aa2.2□□□□□ -2.06
VMR1YHL035C DIA4P38705 446 aaPredicted RBP2.2□□□□□ -2.06
VMR1YHL035C TOM71P38825 639 aaKnown RBP2.2□□□□□ -2.06
VMR1YHL035C LTP1P40347 161 aa2.2□□□□□ -2.06
VMR1YHL035C PKP1P40530 394 aa2.2□□□□□ -2.06
VMR1YHL035C COQ11Q05892 277 aa2.2□□□□□ -2.06
VMR1YHL035C NDJ1Q12366 352 aa2.2□□□□□ -2.06
VMR1YHL035C SES1P07284 462 aaKnown RBP2.2□□□□□ -2.06
VMR1YHL035C SEC18P18759 758 aaKnown RBP2.2□□□□□ -2.06
VMR1YHL035C SRP54P20424 541 aaKnown RBP2.2□□□□□ -2.06
VMR1YHL035C SLZ1P40167 298 aa2.2□□□□□ -2.06
VMR1YHL035C IMO32P53219 342 aa2.2□□□□□ -2.06
VMR1YHL035C MUK1Q02866 612 aa2.2□□□□□ -2.06
VMR1YHL035C RAD33Q04231 177 aa2.2□□□□□ -2.06
VMR1YHL035C HRD3Q05787 833 aa2.2□□□□□ -2.06
VMR1YHL035C ULA1Q12059 462 aa2.2□□□□□ -2.06
VMR1YHL035C MRH1Q12117 320 aaPredicted RBP2.2□□□□□ -2.06
VMR1YHL035C PCT1P13259 424 aa2.2□□□□□ -2.06
VMR1YHL035C TMA108P40462 946 aa2.2□□□□□ -2.06
VMR1YHL035C ASG1P40467 964 aa2.2□□□□□ -2.06
VMR1YHL035C GND2P53319 492 aa2.2□□□□□ -2.06
VMR1YHL035C BSP1Q06604 576 aa2.2□□□□□ -2.06
VMR1YHL035C MDM20Q12387 796 aaKnown RBP2.2□□□□□ -2.06
VMR1YHL035C MRP7P12687 371 aa2.19□□□□□ -2.06
VMR1YHL035C OLE1P21147 510 aaKnown RBP2.19□□□□□ -2.06
VMR1YHL035C AMD2P22580 549 aa2.19□□□□□ -2.06
VMR1YHL035C ADY2P25613 283 aa2.19□□□□□ -2.06
VMR1YHL035C CHS3P29465 1165 aa2.19□□□□□ -2.06
VMR1YHL035C MRP20P32387 263 aa2.19□□□□□ -2.06
VMR1YHL035C CBR1P38626 284 aaKnown RBP2.19□□□□□ -2.06
VMR1YHL035C HOF1Q05080 669 aa2.19□□□□□ -2.06
VMR1YHL035C TPK1P06244 397 aa2.19□□□□□ -2.06
VMR1YHL035C CDC31P06704 161 aaKnown RBP2.19□□□□□ -2.06
VMR1YHL035C RNR3P21672 869 aaKnown RBP2.19□□□□□ -2.06
VMR1YHL035C LAC1P28496 418 aa2.19□□□□□ -2.06
VMR1YHL035C AXL2P38928 823 aa2.19□□□□□ -2.06
VMR1YHL035C VID27P40157 782 aa2.19□□□□□ -2.06
VMR1YHL035C ERR3P42222 437 aa2.19□□□□□ -2.06
VMR1YHL035C UPF3P48412 387 aaKnown RBP2.19□□□□□ -2.06
VMR1YHL035C BSC5P53755 489 aa2.19□□□□□ -2.06
VMR1YHL035C ZDS2P54786 942 aa2.19□□□□□ -2.06
VMR1YHL035C COG4Q06096 861 aa2.19□□□□□ -2.06
VMR1YHL035C ARO10Q06408 635 aa2.19□□□□□ -2.06
VMR1YHL035C RAD34Q06665 692 aa2.19□□□□□ -2.06
VMR1YHL035C PFK2P16862 959 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
VMR1YHL035C RPS7AP26786 190 aaKnown RBP2.19□□□□□ -2.06
VMR1YHL035C IFA38P38286 347 aa2.19□□□□□ -2.06
VMR1YHL035C STR3P53101 465 aaKnown RBP2.19□□□□□ -2.06
VMR1YHL035C RRT6P53117 311 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms