RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN12, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN12	YFR052W	RTT101	P47050	842 aa		5.21	□□□□□ -1.58
RPN12	YFR052W	PRP24	P49960	444 aa	Known RBP	5.21	□□□□□ -1.58
RPN12	YFR052W	KAP114	P53067	1004 aa		5.21	□□□□□ -1.58
RPN12	YFR052W	PEX31	P53203	462 aa		5.21	□□□□□ -1.58
RPN12	YFR052W	IMP4	P53941	290 aa	Known RBP	5.21	□□□□□ -1.58
RPN12	YFR052W	YMR206W	Q03695	313 aa		5.21	□□□□□ -1.58
RPN12	YFR052W	RTN1	Q04947	295 aa	Known RBP	5.21	□□□□□ -1.58
RPN12	YFR052W	RSC2	Q06488	889 aa		5.21	□□□□□ -1.58
RPN12	YFR052W	PEX15	Q08215	383 aa		5.21	□□□□□ -1.58
RPN12	YFR052W	NDD1	Q08887	554 aa		5.21	□□□□□ -1.58
RPN12	YFR052W	DAS2	Q12084	232 aa		5.21	□□□□□ -1.58
RPN12	YFR052W	MEX67	Q99257	599 aa	Known RBP	5.21	□□□□□ -1.58
RPN12	YFR052W	FMP27	Q06179	2628 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	CET1	O13297	549 aa	Predicted RBP	5.2	□□□□□ -1.58
RPN12	YFR052W	RAD10	P06838	210 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	GFA1	P14742	717 aa	Known RBP	5.2	□□□□□ -1.58
RPN12	YFR052W	ARF2	P19146	181 aa	Known RBP	5.2	□□□□□ -1.58
RPN12	YFR052W	MSN1	P22148	382 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	MEI4	P29467	408 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	SPC110	P32380	944 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	HXT1	P32465	570 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	YBL055C	P34220	418 aa	Predicted RBP	5.2	□□□□□ -1.58
RPN12	YFR052W	FSH1	P38777	243 aa	Known RBP	5.2	□□□□□ -1.58
RPN12	YFR052W	LAM1	P38851	1228 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	PRM9	P39551	298 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	SAW1	P39735	261 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	LCP5	P40079	357 aa	Predicted RBP	5.2	□□□□□ -1.58
RPN12	YFR052W	SNG1	P46950	547 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	PPT1	P53043	513 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	YNR065C	P53751	1116 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	CWC24	P53769	259 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	ALF1	P53904	254 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	YPL014W	Q02606	381 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	ATG16	Q03818	150 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	SND1	Q04007	877 aa		5.2	□□□□□ -1.58
RPN12	YFR052W	TOR2	P32600	2474 aa	Known RBP	5.19	□□□□□ -1.58
RPN12	YFR052W	YLR462W	O13556	202 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	HIS1	P00498	297 aa	Known RBP	5.19	□□□□□ -1.58
RPN12	YFR052W	MSF1	P08425	469 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	YPK1	P12688	680 aa	Known RBP	5.19	□□□□□ -1.58
RPN12	YFR052W	PET123	P17558	318 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	YCR015C	P25616	317 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	YHL049C	P38722	271 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	GGA2	P38817	585 aa	Known RBP	5.19	□□□□□ -1.58
RPN12	YFR052W	FLC2	P39719	783 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	SPC72	P39723	622 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	YFL064C	P43540	174 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	TRF5	P48561	642 aa	Known RBP	5.19	□□□□□ -1.58
RPN12	YFR052W	AMA1	P50082	593 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	YGR127W	P53275	312 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	BTN2	P53286	410 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	COP1	P53622	1201 aa	Known RBP	5.19	□□□□□ -1.58
RPN12	YFR052W	DOS2	P54858	310 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	CTR9	P89105	1077 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	ADI1	Q03677	179 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	YMR114C	Q04471	368 aa	Known RBP	5.19	□□□□□ -1.58
RPN12	YFR052W	RSB1	Q08417	382 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	FLC1	Q08967	793 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	YBL111C	Q3E7Y5	667 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	MPD2	Q99316	277 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	IZH4	Q99393	312 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	STT4	P37297	1900 aa		5.19	□□□□□ -1.58
RPN12	YFR052W	CYC7	P00045	113 aa		5.18	□□□□□ -1.58
RPN12	YFR052W	SEC63	P14906	663 aa		5.18	□□□□□ -1.58
RPN12	YFR052W	HCM1	P25364	564 aa		5.18	□□□□□ -1.58
RPN12	YFR052W	PAP1	P29468	568 aa	Known RBP	5.18	□□□□□ -1.58
RPN12	YFR052W	RCK2	P38623	610 aa		5.18	□□□□□ -1.58
RPN12	YFR052W	PMC1	P38929	1173 aa	Predicted RBP	5.18	□□□□□ -1.58
RPN12	YFR052W	YEL028W	P39989	153 aa		5.18	□□□□□ -1.58
RPN12	YFR052W	ATM1	P40416	690 aa		5.18	□□□□□ -1.58
RPN12	YFR052W	ASN2	P49090	572 aa	Known RBP	5.18	□□□□□ -1.58
RPN12	YFR052W	APT1	P49435	187 aa	Known RBP	5.18	□□□□□ -1.58
RPN12	YFR052W	TIM13	P53299	105 aa		5.18	□□□□□ -1.58
RPN12	YFR052W	NGL3	Q03210	505 aa		5.18	□□□□□ -1.58
RPN12	YFR052W	ERV41	Q04651	352 aa		5.18	□□□□□ -1.58
RPN12	YFR052W	KAP95	Q06142	861 aa	Known RBP	5.18	□□□□□ -1.58
RPN12	YFR052W	VAC14	Q06708	880 aa		5.18	□□□□□ -1.58
RPN12	YFR052W	CAN1	P04817	590 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	CKI1	P20485	582 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	STE13	P33894	931 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	TFA2	P36145	328 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	SEA4	P38164	1038 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	KAP104	P38217	918 aa	Known RBP	5.17	□□□□□ -1.58
RPN12	YFR052W	BIT2	P38346	545 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	ERP5	P38819	212 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	DUN1	P39009	513 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	CAJ1	P39101	391 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	ERP2	P39704	215 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	STL1	P39932	569 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	NTA1	P40354	457 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	MDJ2	P42834	146 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	RGD2	P43556	714 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	RPS10B	P46784	105 aa	Known RBP	5.17	□□□□□ -1.58
RPN12	YFR052W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
RPN12	YFR052W	NPY1	P53164	384 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	YNR063W	P53749	607 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	BOP3	P53958	396 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	PIR1	Q03178	341 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	THI7	Q05998	598 aa		5.17	□□□□□ -1.58
RPN12	YFR052W	YSH1	Q06224	779 aa	Predicted RBP	5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms